Matrix_377 | AT1G75490; DREB2C; AT2G40350; AT5G18450 | Not Available | | 86.40% |
Matrix_261 | ATERF-1 | Not Available | | 83.16% |
Matrix_91 | CRF3 | Not Available | | 82.20% |
Matrix_374 | AT5G07580; AT5G61590 | Not Available | | 82.06% |
Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 81.02% |
Matrix_454 | AT1G77200; ATERF38; AT4G16750; AT5G52020 | Not Available | | 78.23% |
Matrix_61 | ATCBF3 | Not Available | | 75.53% |
Matrix_334 | AT3G23230 | Not Available | | 75.20% |
Matrix_287 | ERF2 | Not Available | | 75.12% |
Matrix_409 | DEAR3 | Not Available | | 74.97% |
Matrix_50 | ATERF14; AT5G43410 | Not Available | | 73.46% |
Matrix_343 | AT2G33710 | Not Available | | 73.14% |
Matrix_355 | ERF10; ERF11 | Not Available | | 72.89% |
Matrix_243 | RAP2.12; RAP2.2 | Not Available | | 72.35% |
Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 72.03% |
Matrix_484 | ATERF13 | Not Available | | 71.66% |
Matrix_101 | ERF5 | Not Available | | 71.52% |
Matrix_45 | DRN | Not Available | | 71.31% |
Matrix_433 | ATERF1 | Not Available | | 70.36% |
Matrix_362 | DEAR3 | Not Available | | 69.91% |
Matrix_395 | AT1G19210; ORA47; AT4G31060; AT5G21960 | Not Available | | 69.76% |
Matrix_506 | DRNL; ATERF-4 | Not Available | | 69.41% |
Matrix_147 | ERF3; AT1G80580 | Not Available | | 69.12% |
Matrix_415 | WRKY27 | Not Available | | 68.69% |
Matrix_151 | ASIL1 | Not Available | | 68.41% |
Matrix_73 | DEAR3; RAP2.9; RAP2.10 | Not Available | | 67.93% |
Matrix_295 | ERF1 | Not Available | | 67.93% |
Matrix_86 | CRF5; CRF6; CRF4 | Not Available | | 67.27% |
Matrix_142 | ZFP8 | Not Available | | 67.21% |
Matrix_57 | WIN1; SHN3; SHN2 | Not Available | | 67.19% |
Matrix_242 | AT2G25820; AT3G16280; AT4G32800; TINY2; tny | Not Available | | 67.11% |
Matrix_478 | AT1G01250 | Not Available | | 67.10% |
Matrix_475 | AT5G64220 | Not Available | | 67.03% |
Matrix_234 | RAP2.3 | Not Available | | 66.94% |
Matrix_360 | ORA59 | Not Available | | 66.90% |
Matrix_378 | ATERF1 | Not Available | | 66.83% |
Matrix_146 | ORA47 | Not Available | | 66.77% |
Matrix_344 | ATERF15; AT4G18450 | Not Available | | 66.73% |
Matrix_426 | CRF1; CRF2 | Not Available | | 66.63% |
Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 66.45% |
Matrix_277 | RAP2.6 | Not Available | | 66.20% |
Matrix_244 | DREB2C | Not Available | | 66.12% |
Matrix_80 | BIM1 | Not Available | | 66.05% |
Matrix_92 | AT1G33760 | Not Available | | 65.98% |
Matrix_197 | NAP | Not Available | | 65.71% |
Matrix_202 | WRKY71; WRKY28; WRKY8 | Not Available | | 65.60% |
Matrix_394 | DREB_U | Not Available | | 65.52% |
Matrix_363 | RAP2.3 | Not Available | | 65.01% |
Motif_60 | AtERF-4; AtERF-3 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 64.99% |
Matrix_44 | CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2 | Not Available | | 64.99% |
Matrix_109 | GBF3 | Not Available | | 64.92% |
Matrix_448 | ATERF6 | Not Available | | 64.71% |
Matrix_288 | RAP2.3 | Not Available | | 64.67% |
Matrix_188 | SPL4 | Not Available | | 64.45% |
Matrix_5 | AT5G51190; ERF104 | Not Available | | 64.41% |
Matrix_224 | ERF1 | Not Available | | 64.36% |
Matrix_272 | DEAR4 | Not Available | | 64.32% |
Matrix_331 | GBF1 | Not Available | | 64.04% |
Matrix_473 | RRTF1 | Not Available | | 64.01% |
Matrix_169 | E2F1 | Not Available | | 63.67% |
Motif_371 | DRE-like promoter motif | The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses | | 63.53% |
Matrix_221 | SPL7 | Not Available | | 63.24% |
Matrix_253 | ETT | Not Available | | 63.20% |
Motif_457 | AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 63.16% |
Matrix_37 | GATA27 | Not Available | | 63.12% |
Matrix_14 | ZCW32; AT5G62610 | Not Available | | 62.94% |
Matrix_141 | AT3G25990 | Not Available | | 62.83% |
Matrix_450 | SPL7 | Not Available | | 62.78% |
Motif_50 | AtERF-7; AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses | | 62.71% |
Matrix_385 | DEAR4 | Not Available | | 62.52% |
Matrix_252 | RAP2.6 | Not Available | | 62.20% |
Matrix_190 | ATERF1 | Not Available | | 62.11% |
Motif_625 | AtERF-4; AtERF-3 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 61.96% |
Matrix_463 | HAT3.1 | Not Available | | 61.92% |
Matrix_171 | LBD3; LBD4 | Not Available | | 61.90% |
Matrix_452 | MYB46 | Not Available | | 61.71% |
Matrix_138 | RRTF1 | Not Available | | 61.68% |
Matrix_265 | NGA3 | Not Available | | 61.47% |
Matrix_193 | RAV1 | Not Available | | 61.47% |
Matrix_322 | NST3; ANAC015; BRN2 | Not Available | | 61.04% |
Matrix_263 | WRKY33; WRKY19; WRKY32 | Not Available | | 61.03% |
Matrix_504 | WRKY40 | Not Available | | 61.01% |
Matrix_152 | EIL1; AT5G65100 | Not Available | | 60.99% |
Matrix_46 | AT4G21895 | Not Available | | 60.71% |
Matrix_517 | ERF12 | Not Available | | 60.62% |
Motif_368 | CBF1 BS in cor15a | Determinants in the sequence specific binding of two plant transcription factors, CBF1 and NtERF2, to the DRE and GCC motifs | | 60.56% |
Matrix_119 | RRTF1 | Not Available | | 60.43% |
Matrix_296 | GBF2 | Not Available | | 60.28% |
Matrix_307 | RGL2; RGL3 | Not Available | | 60.25% |
Matrix_248 | ZFP5 | Not Available | | 60.03% |
Matrix_3 | WRKY48 | Not Available | | 59.86% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 59.70% |
Matrix_209 | RAP2.6 | Not Available | | 59.62% |
Matrix_75 | WRKY29 | Not Available | | 59.49% |
Matrix_155 | RAP2.6; ERF110; ABR1 | Not Available | | 59.44% |
Matrix_300 | bZIP68; bZIP16 | Not Available | | 59.14% |
Matrix_17 | WRKY22 | Not Available | | 59.00% |
Matrix_313 | ATMYB65; MYB33 | Not Available | | 58.90% |
Matrix_241 | HB-1; AT5G44180 | Not Available | | 58.87% |
Matrix_99 | DOF4.7 | Not Available | | 58.75% |
Matrix_507 | TCP3 | Not Available | | 58.70% |
Matrix_341 | HMGA | Not Available | | 58.56% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 58.32% |
Matrix_78 | AT3G45610 | Not Available | | 58.14% |
Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 58.05% |
Matrix_70 | GATA26 | Not Available | | 58.05% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 58.04% |
Matrix_423 | AT3G04030 | Not Available | | 57.89% |
Matrix_102 | WRKY21 | Not Available | | 57.88% |
Matrix_196 | TCP20; AT5G41030 | Not Available | | 57.88% |
Matrix_333 | GATA3 | Not Available | | 57.78% |
Matrix_418 | KNAT6; KNAT2 | Not Available | | 57.73% |
Matrix_373 | E2FE | Not Available | | 57.58% |
Motif_509 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 57.52% |
Matrix_384 | ATWRKY17 | Not Available | | 57.40% |
Matrix_389 | ILR3 | Not Available | | 57.17% |
Matrix_285 | DDF1 | Not Available | | 56.87% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 56.56% |
Matrix_84 | AtGRF6 | Not Available | | 56.53% |
Matrix_410 | TOE2 | Not Available | | 56.53% |
Matrix_154 | AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130 | Not Available | | 56.37% |
Matrix_492 | ETT | Not Available | | 56.35% |
Matrix_206 | CUC1; ANAC100 | Not Available | | 56.26% |
Motif_37 | AtERF-4 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 56.25% |
Matrix_249 | WRKY11 | Not Available | | 56.20% |
Matrix_113 | ABI5 | Not Available | | 56.08% |
Matrix_223 | MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1 | Not Available | | 56.06% |
Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 56.02% |
Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 56.02% |
Matrix_120 | BEE2 | Not Available | | 56.00% |
Matrix_227 | AT1G64620 | Not Available | | 55.99% |
Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 55.88% |
Matrix_335 | HSFB2A | Not Available | | 55.88% |
Matrix_420 | ANAC58 | Not Available | | 55.71% |
Matrix_12 | EIN3; EIL2 | Not Available | | 55.64% |
Matrix_85 | SPL5 | Not Available | | 55.59% |
Matrix_35 | YAB5; YAB3 | Not Available | | 55.59% |
Matrix_336 | AT5G08520 | Not Available | | 55.47% |
Matrix_207 | WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49 | Not Available | | 55.32% |
Motif_54 | LTREATLTI78 | Putative low temperature responsive element (LTRE); Found in Arabidopsis thaliana low-temperature-induced (lti) genes, lti78 and lti65; Repeated four times in lti78 which is also known as cor78 and rd29A; Found also in barley low temperature responsive genes, blt4.2, blt4.6, blt4.9 (lipid transfer genes); cold inducible; See LTRECORE; Also present in rab18, kin1, and kin2; Differential expression of two related, low-temperature-induced genes in Arabidopsis thaliana | | 55.25% |
Matrix_220 | WRKY18 | Not Available | | 55.19% |
Matrix_137 | SPL1; SPL12 | Not Available | | 55.09% |
Matrix_260 | CAMTA3 | Not Available | | 55.09% |
Matrix_500 | WRKY43 | Not Available | | 55.08% |
Matrix_156 | POC1 | Not Available | | 55.07% |
Matrix_446 | LBD16 | Not Available | | 55.02% |
Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 55.02% |
Matrix_330 | MYC2; TT8 | Not Available | | 54.91% |
Matrix_323 | BIM3 | Not Available | | 54.84% |
Motif_454 | DRECRTCOREAT | Core motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower) | | 54.75% |
Matrix_489 | RAV1 | Not Available | | 54.72% |
Motif_32 | DREB2A; DREB1A; AtTINY2; DREB1C; DREB1B | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana. Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems.Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression.Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit.Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 54.58% |
Matrix_308 | INO | Not Available | | 54.55% |
Matrix_293 | WRKY38 | Not Available | | 54.49% |
Matrix_329 | WRKY12 | Not Available | | 54.44% |
Matrix_465 | MYC4 | Not Available | | 54.42% |
Matrix_41 | anac058 | Not Available | | 54.36% |
Motif_144 | DREB2A; DREB1A | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 54.33% |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 54.30% |
Matrix_406 | ATERF-7 | Not Available | | 54.13% |
Matrix_100 | AT1G48610 | Not Available | | 54.11% |
Matrix_38 | SPL14 | Not Available | | 54.05% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 53.97% |
Matrix_282 | bZIP60 | Not Available | | 53.93% |
Matrix_490 | AtMYB77; ATMYB44 | Not Available | | 53.90% |
Matrix_346 | AtMYB70; MYB73 | Not Available | | 53.83% |
Matrix_516 | ANAC038; ANAC079 | Not Available | | 53.80% |
Matrix_316 | WRKY15; WRKY39; WRKY7; WRKY74 | Not Available | | 53.74% |
Matrix_23 | ANAC46 | Not Available | | 53.73% |
Matrix_255 | cdf3 | Not Available | | 53.73% |
Motif_274 | MYB1 binding site motif | Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein | | 53.72% |
Motif_191 | AtERF-4; AtERF-3 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 53.59% |
Matrix_128 | TGA2 | Not Available | | 53.55% |
Matrix_20 | ANAC030; NST1; NAC066 | Not Available | | 53.51% |
Matrix_177 | ADOF2 | Not Available | | 53.50% |
Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 53.49% |
Matrix_505 | GATA8 | Not Available | | 53.48% |
Matrix_449 | BIM2 | Not Available | | 53.43% |
Matrix_402 | TOE1 | Not Available | | 53.41% |
Matrix_311 | TGA1 | Not Available | | 53.36% |
Motif_99 | DREB1A; DREB1C; DREB1B | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression;Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit | | 53.15% |
Matrix_380 | ATMYR1 | Not Available | | 53.08% |
Matrix_273 | ANAC55 | Not Available | | 53.05% |
Motif_320 | AGCBOXNPGLB | AGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC box | | 53.00% |
Matrix_199 | AT1G69170; SPL9; SPL15; SPL13A; SPL13B | Not Available | | 52.98% |
Matrix_97 | APRR2 | Not Available | | 52.93% |
Matrix_462 | ATERF-8 | Not Available | | 52.91% |
Matrix_165 | KNAT1 | Not Available | | 52.91% |
Matrix_297 | TCP15 | Not Available | | 52.89% |
Motif_394 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 52.83% |
Matrix_398 | TBP2; ATTRB2 | Not Available | | 52.79% |
Matrix_122 | ABF1; AREB2 | Not Available | | 52.56% |
Matrix_379 | RHL41 | Not Available | | 52.53% |
Matrix_232 | TCP23 | Not Available | | 52.52% |
Matrix_422 | TOE1 | Not Available | | 52.47% |
Matrix_416 | ASL5 | Not Available | | 52.42% |
Matrix_480 | BES1 | Not Available | | 52.40% |
Matrix_200 | PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815 | Not Available | | 52.32% |
Matrix_275 | ZAP1 | Characterization of a zinc-dependent transcriptional activator from Arabidopsis | | 52.04% |
Matrix_126 | RBE | Not Available | | 52.01% |
Matrix_430 | TOE2 | Not Available | | 52.00% |
Matrix_233 | MYC3 | Not Available | | 51.98% |
Matrix_325 | WRKY4; WRKY3; WRKY58; ATWRKY34; WRKY20; ATWRKY2 | Not Available | | 51.97% |
Motif_293 | NONAMERATH4 | Nonamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 gene | | 51.85% |
Matrix_460 | NAM; anac025; ATNAC2 | Not Available | | 51.80% |
Matrix_1 | TOE2 | Not Available | | 51.67% |
Matrix_328 | AT1G76580 | Not Available | | 51.61% |
Motif_402 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 51.60% |
Matrix_332 | SPT; ALC | Not Available | | 51.58% |
Matrix_436 | AT3G49930; AZF1 | Not Available | | 51.50% |
Motif_591 | CBFHV | Binding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs) | | 51.49% |
Matrix_228 | TGA2 | Not Available | | 51.48% |
Matrix_239 | AT5G04390 | Not Available | | 51.46% |
Matrix_503 | AT2G37430; AT3G53600 | Not Available | | 51.41% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 51.33% |
Matrix_368 | ATWRKY56; WRKY45; WRKY75; WRKY24 | Not Available | | 51.18% |
Matrix_387 | ORA47 | Not Available | | 50.99% |
Matrix_289 | WRKY25 | Not Available | | 50.96% |
Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 50.87% |
Motif_666 | MYB binding site promoter | A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes | | 50.82% |
Matrix_11 | TRFL5 | Not Available | | 50.73% |
Motif_685 | PALINDROMICCBOXGM | Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence | | 50.72% |
Motif_89 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 50.72% |
Matrix_456 | bZIP60 | Not Available | | 50.68% |
Matrix_226 | GATA1 | Not Available | | 50.58% |
Matrix_198 | STZ; C2H2; AZF3 | Not Available | | 50.51% |
Matrix_110 | ATABI4; AT3G57600 | Not Available | | 50.46% |
Matrix_479 | TOE1 | Not Available | | 50.38% |
Matrix_476 | bHLH115; bHLH34 | Not Available | | 50.36% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 50.36% |
Motif_344 | MSACRCYM | MSA (M-specific activator) motif in Catharanthus roseus B-type cyclin (CYM) promoter; Essential for M phase-specific expression; Found at -66 to -58 | | 50.34% |
Motif_288 | NONAMERMOTIFTAH3H4 | Nonamer motif found in promoter of wheat histone genes H3 and H4 | | 50.32% |
Matrix_164 | AT1G02030; AT2G45120; AZF2; AT3G60580 | Not Available | | 50.24% |
Matrix_27 | ATAIB; ATNIG1 | Not Available | | 50.06% |
Matrix_292 | FTQ4 | Not Available | | 50.05% |
Motif_399 | UPRMOTIFIAT | Motif I in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc. | | 50.04% |
Matrix_235 | WRKY67; WRKY64; WRKY63; WRKY66 | Not Available | | 50.01% |