PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_307
Name: RGL2; RGL3
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_188	SPL4	Not Available	86.19%
Matrix_221	SPL7	Not Available	82.53%
Matrix_137	SPL1; SPL12	Not Available	78.40%
Matrix_450	SPL7	Not Available	70.64%
Matrix_31	SPL1	Not Available	70.28%
Matrix_374	AT5G07580; AT5G61590	Not Available	68.93%
Matrix_85	SPL5	Not Available	68.28%
Matrix_120	BEE2	Not Available	67.99%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	67.20%
Matrix_371	MYB7; AtMYB6; AtMYB32; ATMYB4	Not Available	67.05%
Matrix_296	GBF2	Not Available	66.63%
Matrix_465	MYC4	Not Available	66.18%
Matrix_418	KNAT6; KNAT2	Not Available	66.15%
Matrix_389	ILR3	Not Available	65.76%
Matrix_37	GATA27	Not Available	65.63%
Matrix_323	BIM3	Not Available	65.52%
Matrix_300	bZIP68; bZIP16	Not Available	65.52%
Matrix_330	MYC2; TT8	Not Available	65.48%
Matrix_151	ASIL1	Not Available	64.85%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	64.75%
Matrix_449	BIM2	Not Available	64.49%
Matrix_398	TBP2; ATTRB2	Not Available	64.45%
Matrix_14	ZCW32; AT5G62610	Not Available	64.43%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	64.38%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	63.86%
Matrix_344	ATERF15; AT4G18450	Not Available	63.02%
Matrix_493	AT1G22985; AT1G71130	Not Available	62.90%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	62.85%
Matrix_59	AT4G00238; AT4G00250	Not Available	62.81%
Matrix_80	BIM1	Not Available	62.64%
Matrix_243	RAP2.12; RAP2.2	Not Available	62.42%
Matrix_415	WRKY27	Not Available	62.40%
Matrix_141	AT3G25990	Not Available	62.30%
Matrix_91	CRF3	Not Available	62.16%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	61.90%
Matrix_129	ABF1	Not Available	61.64%
Matrix_227	AT1G64620	Not Available	61.58%
Matrix_171	LBD3; LBD4	Not Available	61.35%
Matrix_494	OBP4	Not Available	61.28%
Matrix_333	GATA3	Not Available	61.12%
Matrix_109	GBF3	Not Available	61.11%
Motif_51	MYB46	Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis	60.92%
Matrix_11	TRFL5	Not Available	60.64%
Matrix_261	ATERF-1	Not Available	60.61%
Matrix_70	GATA26	Not Available	60.31%
Matrix_321	HRD	Not Available	60.25%
Matrix_206	CUC1; ANAC100	Not Available	60.19%
Matrix_273	ANAC55	Not Available	59.97%
Matrix_143	GATA14; GATA6; GATA5	Not Available	59.96%
Matrix_424	MYB59	Not Available	59.92%
Matrix_84	AtGRF6	Not Available	59.90%
Matrix_259	AT1G50680; AT1G51120	Not Available	59.86%
Matrix_209	RAP2.6	Not Available	59.70%
Matrix_420	ANAC58	Not Available	59.69%
Matrix_177	ADOF2	Not Available	59.69%
Matrix_489	RAV1	Not Available	59.65%
Matrix_331	GBF1	Not Available	59.60%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	59.57%
Matrix_463	HAT3.1	Not Available	59.50%
Matrix_78	AT3G45610	Not Available	59.47%
Matrix_469	NAC041; NAC083	Not Available	59.45%
Matrix_337	MYB46	Not Available	59.34%
Matrix_12	EIN3; EIL2	Not Available	59.28%
Matrix_135	ABI3	Not Available	59.24%
Matrix_58	WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30	Not Available	59.07%
Matrix_315	MYB111	Not Available	58.86%
Matrix_472	ZN_C2_H2	Not Available	58.76%
Matrix_197	NAP	Not Available	58.68%
Matrix_46	AT4G21895	Not Available	58.56%
Matrix_41	anac058	Not Available	58.51%
Matrix_322	NST3; ANAC015; BRN2	Not Available	58.21%
Matrix_23	ANAC46	Not Available	57.97%
Matrix_142	ZFP8	Not Available	57.94%
Matrix_334	AT3G23230	Not Available	57.83%
Matrix_299	PFG3	Not Available	57.76%
Matrix_101	ERF5	Not Available	57.50%
Matrix_379	RHL41	Not Available	57.26%
Matrix_255	cdf3	Not Available	57.20%
Matrix_503	AT2G37430; AT3G53600	Not Available	57.19%
Matrix_287	ERF2	Not Available	56.87%
Matrix_239	AT5G04390	Not Available	56.81%
Matrix_362	DEAR3	Not Available	56.61%
Matrix_411	DOF5.6	Not Available	56.54%
Matrix_198	STZ; C2H2; AZF3	Not Available	56.19%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	56.10%
Matrix_152	EIL1; AT5G65100	Not Available	56.04%
Matrix_182	ATHB6	Not Available	56.02%
Matrix_308	INO	Not Available	56.01%
Matrix_126	RBE	Not Available	55.90%
Matrix_99	DOF4.7	Not Available	55.81%
Matrix_285	DDF1	Not Available	55.75%
Matrix_436	AT3G49930; AZF1	Not Available	55.66%
Matrix_460	NAM; anac025; ATNAC2	Not Available	55.64%
Matrix_274	EDF3	Not Available	55.42%
Matrix_5	AT5G51190; ERF104	Not Available	55.39%
Matrix_336	AT5G08520	Not Available	55.34%
Matrix_341	HMGA	Not Available	55.32%
Matrix_218	TIFY2B; TIFY1	Not Available	55.19%
Matrix_27	ATAIB; ATNIG1	Not Available	55.03%
Motif_165	AP3SV40	AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2	54.91%
Matrix_181	Dof5.7	Not Available	54.85%
Matrix_79	FUS3	Not Available	54.49%
Matrix_416	ASL5	Not Available	54.44%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	54.42%
Matrix_45	DRN	Not Available	54.35%
Matrix_504	WRKY40	Not Available	54.29%
Matrix_313	ATMYB65; MYB33	Not Available	54.25%
Matrix_475	AT5G64220	Not Available	54.24%
Matrix_393	REM1	Not Available	54.23%
Matrix_505	GATA8	Not Available	54.22%
Matrix_174	ZAT2	Not Available	54.19%
Motif_211	ABREMOTIFIOSRAB16B	Motif I found in the promoter of rice rab16B gene; Motif I and motif III are both required for ABA responsiveness; However, each can substitute for the other	54.16%
Matrix_427	ZAT14	Not Available	54.08%
Matrix_20	ANAC030; NST1; NAC066	Not Available	54.02%
Matrix_204	WOX13	Not Available	54.01%
Matrix_492	ETT	Not Available	53.92%
Matrix_122	ABF1; AREB2	Not Available	53.80%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	53.75%
Matrix_455	MYB111	Not Available	53.74%
Matrix_332	SPT; ALC	Not Available	53.72%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	53.60%
Matrix_328	AT1G76580	Not Available	53.58%
Matrix_233	MYC3	Not Available	53.57%
Matrix_100	AT1G48610	Not Available	53.49%
Matrix_211	MYB3	Not Available	53.43%
Matrix_286	GATA7	Not Available	53.40%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	53.38%
Motif_250	ACGTOSGLUB1	ACGT motif found in GluB-1 gene in rice; Required for endosperm-specific expression; Conserved in the 5'-flanking region of glutelin genes; Combination of GCN4, AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression	53.38%
Matrix_500	WRKY43	Not Available	53.34%
Matrix_17	WRKY22	Not Available	53.21%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	53.12%
Matrix_484	ATERF13	Not Available	53.11%
Matrix_502	AT3G13040	Not Available	53.06%
Matrix_388	SNZ; SMZ; TOE2	Not Available	53.04%
Matrix_165	KNAT1	Not Available	53.02%
Matrix_373	E2FE	Not Available	52.94%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	52.90%
Matrix_35	YAB5; YAB3	Not Available	52.70%
Matrix_33	SPL11; SPL10; SPL2	Not Available	52.66%
Matrix_241	HB-1; AT5G44180	Not Available	52.63%
Matrix_271	AT3G16350	Not Available	52.62%
Matrix_180	SPL1	Not Available	52.59%
Matrix_226	GATA1	Not Available	52.58%
Matrix_433	ATERF1	Not Available	52.47%
Matrix_519	ATDOF2.4	Not Available	52.42%
Motif_429	MYB98	MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins	52.30%
Matrix_355	ERF10; ERF11	Not Available	52.29%
Motif_443	KN1; BP	The knotted1-like homeobox gene BREVIPEDICELLUS regulates cell differentiation by modulating metabolic pathways. Selective interaction of plant homeodomain proteins mediates high DNA-binding affinity	52.29%
Matrix_249	WRKY11	Not Available	52.20%
Matrix_248	ZFP5	Not Available	52.16%
Matrix_335	HSFB2A	Not Available	52.14%
Motif_17	AUXRETGA1GMGH3	TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts	52.12%
Matrix_52	ZAT18	Not Available	52.08%
Matrix_225	MYB52	Not Available	52.01%
Matrix_147	ERF3; AT1G80580	Not Available	51.91%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	51.84%
Matrix_437	MYC2	Not Available	51.80%
Matrix_75	WRKY29	Not Available	51.78%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	51.54%
Matrix_72	CDF2	Not Available	51.51%
Matrix_423	AT3G04030	Not Available	51.40%
Matrix_230	ARR11	Not Available	51.34%
Motif_662	MYB26PS	Myb26 binding site; Myb26 recognizes the c-Myb and P-box-like binding sites representing cis-elements in the promoter regions of several phenylpropanoid biosynthetic genes; Identical to P-box in maize, and to Myb305 binding site in snapdragon	51.22%
Matrix_116	ANAC55	Not Available	51.17%
Matrix_476	bHLH115; bHLH34	Not Available	51.16%
Matrix_190	ATERF1	Not Available	51.10%
Matrix_112	TBP2; TFIID-1	Not Available	51.07%
Motif_329	AMMORESIIUDCRNIA1	Motifs (IIU and IID) found in the Chlamydomonas Nia1 gene promoter; Involved in ammonium-response; Located between -231 and -219 and also between -76 and -65; Involved in Nia1 transcription activation	51.03%
Matrix_513	SOL1; TSO1; TCX2	Not Available	51.01%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	50.97%
Matrix_223	MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1	Not Available	50.95%
Matrix_65	POC1; PIL1	Not Available	50.72%
Motif_604	EMHVCHORD	Endosperm motif (EM) found in the promoter of barley c-hordein gene; Involved in the nitrogen response of c-hordein promoter	50.68%
Matrix_38	SPL14	Not Available	50.66%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	50.64%
Motif_685	PALINDROMICCBOXGM	Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence	50.50%
Matrix_507	TCP3	Not Available	50.31%
Matrix_406	ATERF-7	Not Available	50.26%
Matrix_474	ANAC014; ANAC062; NTL9; TIP	Not Available	50.13%
Matrix_360	ORA59	Not Available	50.08%
Matrix_367	REM1	Not Available	50.06%
Matrix_275	ZAP1	Characterization of a zinc-dependent transcriptional activator from Arabidopsis	50.05%
Motif_499	AtMYC2	A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth	50.00%