PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_282
Name: bZIP60
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_228	TGA2	Not Available	93.34%
Matrix_456	bZIP60	Not Available	79.94%
Motif_374	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	79.21%
Motif_128	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	78.30%
Motif_680	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	77.10%
Motif_177	-300MOTIFZMZEIN	Motif in -300 elements of alpha-zein genes of maize; homologous to the sequence to which transacting factors of AP-1, fos, jun or yeast hisS bind	74.11%
Matrix_273	ANAC55	Not Available	74.10%
Motif_512	GLMHVCHORD	GLM (GCN4-like motif) found in the promoter of barley B1- and c-hordein gene; Involved in the nitrogen response of c-hordein promoter; SPA, a seed-specific basic leucine zipper protein from wheat, can activate transcription from the GCN4-like motif (GLM) of -326 LMWG-1D1 promoter	71.77%
Matrix_20	ANAC030; NST1; NAC066	Not Available	71.11%
Motif_74	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	70.05%
Motif_685	PALINDROMICCBOXGM	Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence	69.94%
Matrix_432	AT1G77920	Not Available	69.54%
Matrix_139	OBF5	Not Available	69.21%
Matrix_120	BEE2	Not Available	68.62%
Matrix_128	TGA2	Not Available	67.95%
Matrix_116	ANAC55	Not Available	67.31%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	66.91%
Matrix_23	ANAC46	Not Available	66.86%
Matrix_449	BIM2	Not Available	66.78%
Matrix_433	ATERF1	Not Available	66.78%
Matrix_322	NST3; ANAC015; BRN2	Not Available	66.57%
Matrix_355	ERF10; ERF11	Not Available	66.34%
Matrix_323	BIM3	Not Available	66.10%
Matrix_465	MYC4	Not Available	65.94%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	65.93%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	65.86%
Matrix_253	ETT	Not Available	65.68%
Matrix_311	TGA1	Not Available	65.60%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	65.58%
Motif_362	TGA2 octamer	palindromic octamer found enriched in chip-chip regions for TGA2	65.53%
Matrix_50	ATERF14; AT5G43410	Not Available	65.41%
Matrix_420	ANAC58	Not Available	65.23%
Matrix_330	MYC2; TT8	Not Available	65.16%
Motif_573	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	64.84%
Motif_132	PIATGAPB	PI found in the Arabidopsis thaliana GAPB gene promoter; Located between -157 and -150; Mutations in the PI resulted in reductions of light-activated gene transcription; GAPB encodes the B subunit of chloroplast glyceraldehyde-3-phosphate dehydrogenase(GADPH) of A.T.; Promoter analysis of the nuclear gene encoding the chloroplast glyceraldehyde-3-phosphate dehydrogenase B subunit of Arabidopsis thaliana	64.45%
Matrix_129	ABF1	Not Available	64.44%
Matrix_389	ILR3	Not Available	64.25%
Matrix_166	TGA4	Not Available	64.09%
Matrix_288	RAP2.3	Not Available	63.84%
Matrix_14	ZCW32; AT5G62610	Not Available	63.55%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	63.49%
Motif_17	AUXRETGA1GMGH3	TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts	63.29%
Motif_639	WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis	63.24%
Matrix_421	GLK1	Not Available	63.20%
Motif_621	bZIP23; bZIP19	Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency	63.13%
Motif_275	AtbZIP1	The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding	62.55%
Matrix_151	ASIL1	Not Available	62.47%
Motif_295	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	62.29%
Motif_67	LS5ATPR1	LS5; A negative regulatory element found in the Arabidopsis PR-1 gene promoter; Binding site of TGA2; NPR1 increased the binding of TGA2 to the element; NPR1 is essential in activating systemic, inducible plant defense response; TGA6 expressed in roots in young seedlings; TGA2.1 is a direct transcriptional activator; TGA2.2 stabilizes TGA2.1 binding; The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors	62.26%
Matrix_141	AT3G25990	Not Available	62.22%
Motif_338	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	62.20%
Motif_648	ARE2	ARE (antioxidant response element); antioxidant response element of mouse metallothionein-I (MT-I) gene; Consensus sequence of mouse MT-I and MT-II genes, and MT genes isolated from rat, hamster, human, sheep, chicken, Drosophila melanogaster, C. elegans; See ARE1	61.92%
Matrix_165	KNAT1	Not Available	61.85%
Motif_199	GCN4OSGLUB1	GCN4 motif found in GluB-1 gene in rice; Required for endosperm-specific expression; AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression; This motif is the recognition site for a basic leucine zipper transcription factor that belongs to the group of maize Opaque-2 (O2)-like proteins; Although all the RISBZ proteins are able to interact with the GCN4 motif, only RISBZ1 is capable of activating the gene expression	61.83%
Motif_80	AP1SV40	AP-1 binding site in enhancer regions of SV40 and human metallothionein IIA (hMT IIA)	61.83%
Motif_203	bZIP23; bZIP19	Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency	61.66%
Matrix_448	ATERF6	Not Available	61.61%
Matrix_138	RRTF1	Not Available	61.51%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	61.38%
Matrix_281	TCP13	Not Available	61.10%
Matrix_260	CAMTA3	Not Available	60.98%
Matrix_363	RAP2.3	Not Available	60.89%
Matrix_261	ATERF-1	Not Available	60.73%
Motif_89	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	60.65%
Matrix_492	ETT	Not Available	60.59%
Matrix_460	NAM; anac025; ATNAC2	Not Available	60.58%
Matrix_393	REM1	Not Available	60.56%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	60.52%
Motif_219	E2Fa	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	60.39%
Matrix_409	DEAR3	Not Available	60.37%
Matrix_277	RAP2.6	Not Available	60.28%
Matrix_259	AT1G50680; AT1G51120	Not Available	60.27%
Matrix_512	HAT3	Not Available	60.23%
Motif_509	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	60.11%
Matrix_70	GATA26	Not Available	60.07%
Matrix_40	TCP2	Not Available	60.03%
Matrix_97	APRR2	Not Available	60.01%
Matrix_59	AT4G00238; AT4G00250	Not Available	59.69%
Motif_652	AUXRETGA2GMGH3	TGA-box #2 in putative auxin-resonsive element (AUXRE) E1 of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts; Hex-like element; E1 element=-249 to -203; E2 element=-241 to -224	59.69%
Matrix_61	ATCBF3	Not Available	59.67%
Matrix_332	SPT; ALC	Not Available	59.56%
Motif_19	AAGACGTAGATACL12	Sequence found in Arabidopsis acyl carrier protein (ACP), Acl1.2, gene promoter; Contains bZIP core motif (ACGT)	59.46%
Matrix_119	RRTF1	Not Available	59.44%
Matrix_374	AT5G07580; AT5G61590	Not Available	59.35%
Matrix_493	AT1G22985; AT1G71130	Not Available	58.99%
Matrix_224	ERF1	Not Available	58.98%
Motif_528	ABI5	The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	58.87%
Matrix_472	ZN_C2_H2	Not Available	58.85%
Matrix_167	ZAT6	Not Available	58.81%
Matrix_233	MYC3	Not Available	58.59%
Matrix_204	WOX13	Not Available	58.58%
Matrix_321	HRD	Not Available	58.54%
Matrix_418	KNAT6; KNAT2	Not Available	58.51%
Matrix_437	MYC2	Not Available	58.45%
Motif_60	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	58.24%
Motif_625	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	58.11%
Matrix_91	CRF3	Not Available	57.89%
Matrix_171	LBD3; LBD4	Not Available	57.72%
Matrix_122	ABF1; AREB2	Not Available	57.64%
Matrix_94	TCP5	Not Available	57.62%
Matrix_300	bZIP68; bZIP16	Not Available	57.57%
Matrix_57	WIN1; SHN3; SHN2	Not Available	57.33%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	57.18%
Matrix_69	AT2G03500	Not Available	56.90%
Matrix_143	GATA14; GATA6; GATA5	Not Available	56.77%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	56.58%
Matrix_294	MEE35	Not Available	56.56%
Matrix_491	AT1G68670; AT3G25790	Not Available	56.51%
Matrix_334	AT3G23230	Not Available	56.46%
Matrix_296	GBF2	Not Available	56.45%
Matrix_348	AT5G51910	Not Available	56.44%
Matrix_516	ANAC038; ANAC079	Not Available	56.32%
Motif_107	O2F2BE2S1	opaque-2 recognition site F2 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F2 is a new O2-binding sequence related to the O2 target sites of the Coix alpha-coxin, the maize b-32 genes and the AP-1 pseudopalindrome	56.18%
Matrix_394	DREB_U	Not Available	56.13%
Motif_399	UPRMOTIFIAT	Motif I in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc.	56.12%
Matrix_41	anac058	Not Available	56.05%
Matrix_344	ATERF15; AT4G18450	Not Available	56.01%
Matrix_4	ARR14	Not Available	55.98%
Matrix_385	DEAR4	Not Available	55.92%
Matrix_333	GATA3	Not Available	55.90%
Matrix_500	WRKY43	Not Available	55.86%
Matrix_188	SPL4	Not Available	55.83%
Matrix_16	AT3G04450; PHL1	Not Available	55.78%
Matrix_243	RAP2.12; RAP2.2	Not Available	55.70%
Motif_440	TGA1 binding site motif	Hex motif; Binding site of Arabidopsis bZIP protein TGA1 and G box binding factor GBF1; TGA1 and members of the GBF family differ in their DNA binding properties; G-Box-like element;TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG	55.69%
Matrix_152	EIL1; AT5G65100	Not Available	55.68%
Matrix_247	PIF3	Not Available	55.67%
Matrix_37	GATA27	Not Available	55.62%
Matrix_249	WRKY11	Not Available	55.56%
Matrix_210	ARR1	Not Available	55.55%
Matrix_324	AT2G01060	Not Available	55.54%
Matrix_82	TCP17	Not Available	55.44%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	55.36%
Motif_402	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	55.34%
Matrix_320	MYC4	Not Available	55.18%
Matrix_206	CUC1; ANAC100	Not Available	55.12%
Matrix_303	ATWOX13	Not Available	55.11%
Motif_583	AtbZIP1	The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding	55.09%
Motif_497	ARE1	ARE (antioxidant response element); antioxidant response element of rat glutathione S-transferase Ya subunit, and rat NAD(P)H:quinone reductase genes	54.93%
Matrix_244	DREB2C	Not Available	54.91%
Matrix_162	AtPHR1	Not Available	54.84%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	54.78%
Matrix_361	AT1G25550	Not Available	54.75%
Matrix_144	AT5G08330; AT5G23280	Not Available	54.72%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	54.70%
Motif_255	B2GMAUX28	B2; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; Located between -310 and -301; Contains a TGACGACA sequence which is similar to TGACGT/C sequence found in Ocs, CaMV35S and histone H3 promoter; Contains as-1 motif	54.49%
Motif_144	DREB2A; DREB1A	Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses	54.46%
Matrix_209	RAP2.6	Not Available	54.32%
Matrix_258	WOX13	Not Available	54.29%
Matrix_279	HRS1	Not Available	54.25%
Matrix_236	CCA1	Not Available	54.17%
Matrix_307	RGL2; RGL3	Not Available	54.12%
Matrix_80	BIM1	Not Available	54.10%
Matrix_474	ANAC014; ANAC062; NTL9; TIP	Not Available	54.05%
Matrix_331	GBF1	Not Available	54.02%
Matrix_178	HSFB2A	Not Available	53.99%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	53.97%
Matrix_114	EPR1; AT3G10113	Not Available	53.93%
Matrix_27	ATAIB; ATNIG1	Not Available	53.91%
Matrix_173	ZAP1	Not Available	53.83%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	53.79%
Matrix_450	SPL7	Not Available	53.77%
Motif_406	ABREBZMRAB28	ABA-responsive element (ABRE B) found at -105 to -96 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues	53.69%
Matrix_505	GATA8	Not Available	53.67%
Matrix_339	bHLH104	Not Available	53.64%
Matrix_46	AT4G21895	Not Available	53.58%
Matrix_425	TIFY2A	Not Available	53.57%
Motif_212	GARE2OSREP1	Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice	53.49%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	53.47%
Matrix_275	ZAP1	Characterization of a zinc-dependent transcriptional activator from Arabidopsis	53.43%
Matrix_221	SPL7	Not Available	53.36%
Matrix_42	AT2G45680	Not Available	53.34%
Matrix_469	NAC041; NAC083	Not Available	53.33%
Matrix_8	KAN1	Not Available	53.31%
Matrix_157	LHY; RVE2	Not Available	53.26%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	53.19%
Matrix_438	AtbZIP63	Not Available	53.19%
Matrix_415	WRKY27	Not Available	53.13%
Matrix_354	AHL12	Not Available	53.07%
Matrix_109	GBF3	Not Available	53.05%
Matrix_399	TGA1	Not Available	53.02%
Matrix_218	TIFY2B; TIFY1	Not Available	52.99%
Motif_158	ZDNAFORMINGATCAB1	Z-DNA-forming sequence found in the Arabidopsis chlorophyll a/b binding protein gene (cab1) promoter; Involved in light-dependent developmental expression of the gene; Z-box; Activation of Z-box containing promoters is regulated by downstream regulatory components, COP1 and HY5; phyB and CRY1 photoreceptors act redundantly to induce Z-box containing promoters in white light; Identification of upstream regulatory elements involved in the developmental expression of the Arabidopsis thaliana cab1 gene	52.93%
Matrix_463	HAT3.1	Not Available	52.89%
Motif_116	INRNTPSADB	Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box	52.81%
Matrix_424	MYB59	Not Available	52.79%
Motif_257	BOX1PSGS2	Box 1 element in pea glutamine synthetase (GS2) gene; An element in a 33-bp AT-rich sequence (box 1) of the 5' end of a GS2 promoter; Located at -837 to -827 of pea GS2; Multimer of box 1 element was used to isolate a cDNA encoding an AT-rich DNA binding protein (ATBP-1)	52.78%
Matrix_278	AtbZIP44	Not Available	52.71%
Matrix_373	E2FE	Not Available	52.71%
Motif_86	ACGTABOX	A-box according to the nomenclature of ACGT elements; One of ACGT elements; Found in ocs gene; RITA-1 binding site; G motif; G motif and TATCCAY motif (a GATA motif as its antisense sequence) are responsible for sugar repression	52.61%
Motif_394	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	52.59%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	52.58%
Motif_319	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	52.50%
Motif_378	WRKY6	Targets of AtWRKY6 regulation during plant senescence and pathogen defense	52.43%
Matrix_212	ATHB-12	Not Available	52.40%
Motif_610	GATA-2; GATA-4; GATA-3; GATA-1	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	52.38%
Motif_32	DREB2A; DREB1A; AtTINY2; DREB1C; DREB1B	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana. Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems.Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression.Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit.Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses	52.33%
Matrix_347	WOX14; WOX10	Not Available	52.31%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	52.27%
Matrix_181	Dof5.7	Not Available	52.26%
Motif_576	TGACGTVMAMY	TGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seeds	52.18%
Motif_453	HEXMOTIFTAH3H4	hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding site	52.18%
Matrix_211	MYB3	Not Available	52.14%
Motif_590	MYB3 binding site motif	Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses	52.12%
Matrix_336	AT5G08520	Not Available	52.11%
Matrix_476	bHLH115; bHLH34	Not Available	52.11%
Matrix_475	AT5G64220	Not Available	52.08%
Matrix_452	MYB46	Not Available	52.03%
Matrix_67	GLK1	Not Available	52.02%
Matrix_130	TCP16	Not Available	52.01%
Matrix_369	AT2G18300	Not Available	52.00%
Matrix_365	AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1	Not Available	51.95%
Matrix_406	ATERF-7	Not Available	51.95%
Matrix_287	ERF2	Not Available	51.93%
Matrix_86	CRF5; CRF6; CRF4	Not Available	51.81%
Motif_33	ACGTCBOX	C-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding site	51.76%
Motif_552	MRE1	MRE (metal responsive element); Consensus sequence of MRE; MRE; MEP-1; MBF-1; MTF-1	51.75%
Matrix_484	ATERF13	Not Available	51.74%
Matrix_174	ZAT2	Not Available	51.71%
Motif_310	ANAERO3CONSENSUS	One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO3CONSENSUS by the PLACEdb curator	51.70%
Motif_95	UPRE2AT	XBP1 binding site-like sequence found in the plant UPRE (unfolded protein response element) in Arabidopsis thaliana;Either of ERSEII or XBP1 binding sites is essential and sufficient for the UPR	51.70%
Motif_29	GATA-1	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	51.68%
Matrix_64	PIF5	Not Available	51.46%
Matrix_308	INO	Not Available	51.45%
Matrix_299	PFG3	Not Available	51.39%
Matrix_506	DRNL; ATERF-4	Not Available	51.37%
Motif_286	SEBFCONSSTPR10A	Binding site of the potato silencing element binding factor (SEBF) gene found in promoter of pathogenesis-related gene (PR-10a); Located between -45 and -39; Similar to the auxin response element	51.34%
Matrix_230	ARR11	Not Available	51.29%
Matrix_81	YAB1	Not Available	51.15%
Matrix_92	AT1G33760	Not Available	51.12%
Matrix_426	CRF1; CRF2	Not Available	51.11%
Motif_250	ACGTOSGLUB1	ACGT motif found in GluB-1 gene in rice; Required for endosperm-specific expression; Conserved in the 5'-flanking region of glutelin genes; Combination of GCN4, AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression	51.10%
Matrix_266	TCP16	Determinants of the DNA binding specificity of class I and class II TCP transcription factors	51.08%
Matrix_135	ABI3	Not Available	51.07%
Matrix_45	DRN	Not Available	51.01%
Matrix_101	ERF5	Not Available	50.96%
Matrix_60	AT1G01260; AT5G57150	Not Available	50.93%
Matrix_170	AT5G47660	Not Available	50.92%
Matrix_293	WRKY38	Not Available	50.92%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	50.88%
Matrix_255	cdf3	Not Available	50.86%
Motif_483	ABREMOTIFAOSOSEM	motif A ABRE-like sequence found in rice Osem gene promoter; Essential for activation by VP1; Important for regulation by ABA;TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption;ABRE motif A found in the promoter of the rice Osem gene; ACGT-containing ABRE; Required for ABA-responsiveness and VP1 activation; Binding site of TRAB1; Motif A and CE3 are functionally equivalent; TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption	50.77%
Matrix_150	UNE10; PIF7	Not Available	50.75%
Matrix_147	ERF3; AT1G80580	Not Available	50.71%
Matrix_87	AT1G19000	Not Available	50.70%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	50.65%
Matrix_430	TOE2	Not Available	50.64%
Matrix_85	SPL5	Not Available	50.58%
Matrix_93	YAB5	Not Available	50.55%
Matrix_11	TRFL5	Not Available	50.54%
Matrix_423	AT3G04030	Not Available	50.54%
Matrix_329	WRKY12	Not Available	50.54%
Matrix_398	TBP2; ATTRB2	Not Available	50.51%
Motif_598	SORLIP3AT	one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; See also all SORLIPs and also all SORLREPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	50.43%
Motif_244	ABRE-like binding site motif	Not Available	50.41%
Motif_237	O2F1BE2S1	opaque-2 recognition site F1 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F1 is hybrid C/G box	50.36%
Matrix_462	ATERF-8	Not Available	50.35%
Motif_2	ACGTSEED2	ACGT motif related to seed expression; Gene: French bean phaseolin; transacting factor: 02	50.35%
Matrix_190	ATERF1	Not Available	50.33%
Matrix_489	RAV1	Not Available	50.29%
Motif_444	OCTAMOTIF2	Octamer motif found in histone-gene-specific consensus sequences; 200 base upstream from the initiation codon ATG; Exist in all of seven plant histone genes	50.24%
Matrix_285	DDF1	Not Available	50.20%
Matrix_227	AT1G64620	Not Available	50.17%
Matrix_328	AT1G76580	Not Available	50.06%
Motif_606	NAPINMOTIFBN	Sequence found in 5' upstream region (-6, -95, -188) of napin (2S albumin) gene in Brassica napus; Interact with a protein present in crude nuclear extracts from developing B. napus seeds	50.06%
Matrix_160	RVE1	Not Available	50.05%
Motif_445	PDF2; ATML1	Regulation of shoot epidermal cell differentiation by a pair of homeodomain proteins in Arabidopsis. Identification of a cis-regulatory element for L1 layer-specific gene expression, which is targeted by an L1-specific homeodomain protein	50.04%
Matrix_108	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	50.04%
Matrix_274	EDF3	Not Available	50.01%
Motif_522	E2Fa	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	50.00%