Matrix_368 | ATWRKY56; WRKY45; WRKY75; WRKY24 | Not Available | | 70.21% |
Matrix_202 | WRKY71; WRKY28; WRKY8 | Not Available | | 69.93% |
Matrix_245 | WRKY62; WRKY38 | Not Available | | 68.78% |
Matrix_289 | WRKY25 | Not Available | | 66.36% |
Motif_293 | NONAMERATH4 | Nonamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 gene | | 65.95% |
Matrix_58 | WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30 | Not Available | | 64.94% |
Matrix_197 | NAP | Not Available | | 64.93% |
Matrix_235 | WRKY67; WRKY64; WRKY63; WRKY66 | Not Available | | 64.85% |
Motif_122 | TGTCACACMCUCUMISIN | TGTCACA motif found in the region (from -254 to -215) of cucumisin (a subtilisin-like serine protease) in the fruit of melon; A novel enhancer element necessary for fruit-specific expression of the cucumisin gene | | 64.29% |
Matrix_325 | WRKY4; WRKY3; WRKY58; ATWRKY34; WRKY20; ATWRKY2 | Not Available | | 63.97% |
Motif_562 | -300CORE | TGTAAAG core motif in -300 elements of alpha-zein genes of maize; -300 element core; prolamin box; P-box; Binds with P-box binding factor (PBF); Binds with BPBF (Barley PBF); PBF is a DNA-binding protein of the DOF class of transcription factors | | 62.79% |
Motif_490 | PROLAMINBOXOSGLUB1 | Prolamine box found in the rice GluB-1 gene promoter; Involved in quantitative regulation of the GluB-1 gene | | 62.79% |
Matrix_220 | WRKY18 | Not Available | | 62.45% |
Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 61.86% |
Motif_26 | GRF7 | Arabidopsis GROWTH-REGULATING FACTOR7 Functions as a Transcriptional Repressor of Abscisic Acid- and Osmotic Stress-Responsive Genes, Including DREB2A | | 61.61% |
Matrix_102 | WRKY21 | Not Available | | 60.62% |
Matrix_415 | WRKY27 | Not Available | | 60.51% |
Motif_525 | CRTDREHVCBF2 | Preferred sequence for AP2 transcriptional activator HvCBF2 of barley; Core CRT/DRE motif; HvCBF2 bound to a (G/a)(T/c)CGAC core motif; DNA binding is regulated by temperature | | 60.33% |
Matrix_207 | WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49 | Not Available | | 60.25% |
Matrix_316 | WRKY15; WRKY39; WRKY7; WRKY74 | Not Available | | 59.33% |
Motif_426 | MYB58; MYB63 | MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis | | 59.17% |
Motif_71 | WRKY63 | ABO3, a WRKY transcription factor, mediates plant responses to abscisic acid and drought tolerance in Arabidopsis | | 59.10% |
Motif_288 | NONAMERMOTIFTAH3H4 | Nonamer motif found in promoter of wheat histone genes H3 and H4 | | 58.62% |
Matrix_504 | WRKY40 | Not Available | | 57.83% |
Motif_383 | UPRE-III(bZIP60) | The plant-specific transcription factor NAC103 is induced by bZIP60 through a new cis-regulatory element to modulate the unfolded protein response in Arabidopsis | | 57.24% |
Matrix_500 | WRKY43 | Not Available | | 57.01% |
Matrix_96 | TMO6 | Not Available | | 56.78% |
Motif_437 | ANAERO2CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1) | | 56.59% |
Motif_459 | SORLIP1 | Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | | 56.59% |
Matrix_249 | WRKY11 | Not Available | | 56.22% |
Motif_502 | MYB98 | The MYB98 subcircuit of the synergid gene regulatory network includes genes directly and indirectly regulated by MYB98 | | 55.49% |
Matrix_384 | ATWRKY17 | Not Available | | 55.28% |
Matrix_470 | WRKY18 | Not Available | | 55.14% |
Motif_16 | -300ELEMENT | Present upstream of the promoter from the B-hordein gene of barley and the alpha-gliadin, gamma-gliadin, and low molecular weight glutenin genes of wheat; See S000001 -300CORE; See S000002 -300MOTIF | | 54.98% |
Matrix_221 | SPL7 | Not Available | | 54.49% |
Matrix_163 | AT2G20110 | Not Available | | 54.27% |
Motif_604 | EMHVCHORD | Endosperm motif (EM) found in the promoter of barley c-hordein gene; Involved in the nitrogen response of c-hordein promoter | | 53.76% |
Motif_1 | GT1CORE | Critical for GT-1 binding to box II of rbcS; Transcriptional activation by Arabidopsis GT-1 may be through interaction with TFIIA-TBP-TATA complex | | 53.69% |
Motif_239 | MYB2 | Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygen | | 53.43% |
Motif_429 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 53.43% |
Matrix_248 | ZFP5 | Not Available | | 53.29% |
Motif_118 | CAATBOX2 | CAAT box found in the 5' upstream region (-80) of many eukaryotic genes; GGC(or T)CAATCT | | 53.10% |
Matrix_457 | TGA2 | Not Available | | 52.67% |
Matrix_148 | WRKY60 | Not Available | | 52.64% |
Motif_419 | MYB4 binding site motif | Not Available | | 52.58% |
Motif_254 | MYB46; MYB83 | MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes | | 52.43% |
Matrix_400 | MYB46 | MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes | | 52.43% |
Matrix_486 | MYB83 | MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes | | 52.43% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 52.08% |
Matrix_175 | Dof5.7 | Not Available | | 52.03% |
Matrix_484 | ATERF13 | Not Available | | 51.73% |
Motif_591 | CBFHV | Binding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs) | | 51.65% |
Matrix_360 | ORA59 | Not Available | | 51.65% |
Matrix_3 | WRKY48 | Not Available | | 51.61% |
Matrix_241 | HB-1; AT5G44180 | Not Available | | 51.40% |
Motif_287 | BIHD1OS | Binding site of OsBIHD1, a rice BELL homeodomain transcription factor | | 51.31% |
Motif_274 | MYB1 binding site motif | Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein | | 51.30% |
Motif_371 | DRE-like promoter motif | The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses | | 51.20% |
Matrix_344 | ATERF15; AT4G18450 | Not Available | | 51.06% |
Matrix_45 | DRN | Not Available | | 50.94% |
Motif_404 | AACACOREOSGLUB1 | Core of AACA motifs found in rice glutelin genes, involved in controlling the endosperm-specific expression; AACA is also closely associated with the GCN4 motif in all rice glutelin genes and together have been shown to confer endosperm-specific enhancement to the truncated -90 CaMV 35S promoter | | 50.86% |
Motif_12 | CEREGLUBOX2PSLEGA | cereal glutenin box in pea legumin gene (legA); sequence homologous to the cereal glutenin gene control element (-300 element) | | 50.79% |
Motif_181 | IBOXCORENT | I-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regions | | 50.75% |
Matrix_390 | GT-1 | Not Available | | 50.64% |
Motif_213 | ZML2 | The CRYPTOCHROME1-Dependent Response to Excess Light Is Mediated through the Transcriptional Activators ZINC FINGER PROTEIN EXPRESSED IN INFLORESCENCE MERISTEM LIKE1 and ZML2 in Arabidopsis | | 50.61% |
Motif_168 | IBOX | I box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated gene | | 50.59% |
Matrix_258 | WOX13 | Not Available | | 50.58% |
Matrix_357 | WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72 | Not Available | | 50.44% |
Motif_375 | ERELEE4 | ERE (ethylene responsive element) of tomato E4 and carnation GST1 genes; GST1 is related to senescence; Found in the 5'-LTR region of TLC1.1 retrotransposon family in Lycopersicon chilense; ERE motifs mediate ethylene-induced activation of the U3 promoter region | | 50.42% |
Motif_559 | RAV1-A binding site motif; RAV1AAT | Binding consensus sequence of Arabidopsis transcription factor, RAV1; RAV1 specifically binds to DNA with bipartite sequence motifs of RAV1-A (CAACA) and RAV1-B (CACCTG); RAV1 protein contain AP2-like and B3-like domains; The AP2-like and B3-like domains recognize the CAACA and CACCTG motifs, respectively; The expression level of RAV1 were relatively high in rosette leaves and roots; RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 50.41% |
Motif_508 | CEREGLUBOX1PSLEGA | cereal glutenin box in pea legumin gene (legA); sequence homologous to the cereal glutenin gene control element (-300 element) | | 50.31% |
Motif_59 | CEREGLUBOX3PSLEGA | cereal glutenin box in pea (P.s.) legumin gene (legA); sequence homologous to the cereal glutenin gene control elements | | 50.31% |
Matrix_253 | ETT | Not Available | | 50.06% |