| Matrix_282 | bZIP60 | Not Available | | 93.34% |
| Motif_128 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 83.57% |
| Motif_374 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 81.88% |
| Motif_680 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 79.13% |
| Motif_177 | -300MOTIFZMZEIN | Motif in -300 elements of alpha-zein genes of maize; homologous to the sequence to which transacting factors of AP-1, fos, jun or yeast hisS bind | | 77.75% |
| Matrix_456 | bZIP60 | Not Available | | 77.44% |
| Motif_512 | GLMHVCHORD | GLM (GCN4-like motif) found in the promoter of barley B1- and c-hordein gene; Involved in the nitrogen response of c-hordein promoter; SPA, a seed-specific basic leucine zipper protein from wheat, can activate transcription from the GCN4-like motif (GLM) of -326 LMWG-1D1 promoter | | 74.80% |
| Motif_74 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 74.23% |
| Matrix_273 | ANAC55 | Not Available | | 73.49% |
| Motif_685 | PALINDROMICCBOXGM | Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence | | 73.23% |
| Matrix_139 | OBF5 | Not Available | | 71.03% |
| Matrix_20 | ANAC030; NST1; NAC066 | Not Available | | 70.69% |
| Matrix_432 | AT1G77920 | Not Available | | 69.07% |
| Matrix_419 | TGA9; PAN; TGA6; bZIP65 | Not Available | | 68.47% |
| Motif_362 | TGA2 octamer | palindromic octamer found enriched in chip-chip regions for TGA2 | | 68.09% |
| Matrix_116 | ANAC55 | Not Available | | 67.52% |
| Motif_295 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 66.77% |
| Motif_17 | AUXRETGA1GMGH3 | TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts | | 66.45% |
| Matrix_200 | PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815 | Not Available | | 66.16% |
| Motif_338 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 66.13% |
| Matrix_449 | BIM2 | Not Available | | 66.10% |
| Matrix_120 | BEE2 | Not Available | | 65.41% |
| Matrix_128 | TGA2 | Not Available | | 65.34% |
| Matrix_323 | BIM3 | Not Available | | 65.12% |
| Motif_132 | PIATGAPB | PI found in the Arabidopsis thaliana GAPB gene promoter; Located between -157 and -150; Mutations in the PI resulted in reductions of light-activated gene transcription; GAPB encodes the B subunit of chloroplast glyceraldehyde-3-phosphate dehydrogenase(GADPH) of A.T.; Promoter analysis of the nuclear gene encoding the chloroplast glyceraldehyde-3-phosphate dehydrogenase B subunit of Arabidopsis thaliana | | 64.98% |
| Matrix_433 | ATERF1 | Not Available | | 64.88% |
| Motif_621 | bZIP23; bZIP19 | Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency | | 64.86% |
| Motif_80 | AP1SV40 | AP-1 binding site in enhancer regions of SV40 and human metallothionein IIA (hMT IIA) | | 64.69% |
| Motif_199 | GCN4OSGLUB1 | GCN4 motif found in GluB-1 gene in rice; Required for endosperm-specific expression; AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression; This motif is the recognition site for a basic leucine zipper transcription factor that belongs to the group of maize Opaque-2 (O2)-like proteins; Although all the RISBZ proteins are able to interact with the GCN4 motif, only RISBZ1 is capable of activating the gene expression | | 64.69% |
| Motif_203 | bZIP23; bZIP19 | Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency | | 64.68% |
| Motif_573 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 64.64% |
| Motif_639 | WRKY18 | Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis | | 63.97% |
| Matrix_253 | ETT | Not Available | | 63.96% |
| Matrix_23 | ANAC46 | Not Available | | 63.90% |
| Matrix_311 | TGA1 | Not Available | | 63.69% |
| Motif_19 | AAGACGTAGATACL12 | Sequence found in Arabidopsis acyl carrier protein (ACP), Acl1.2, gene promoter; Contains bZIP core motif (ACGT) | | 63.66% |
| Motif_275 | AtbZIP1 | The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding | | 63.31% |
| Matrix_44 | CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2 | Not Available | | 63.25% |
| Matrix_355 | ERF10; ERF11 | Not Available | | 63.18% |
| Motif_67 | LS5ATPR1 | LS5; A negative regulatory element found in the Arabidopsis PR-1 gene promoter; Binding site of TGA2; NPR1 increased the binding of TGA2 to the element; NPR1 is essential in activating systemic, inducible plant defense response; TGA6 expressed in roots in young seedlings; TGA2.1 is a direct transcriptional activator; TGA2.2 stabilizes TGA2.1 binding; The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors | | 63.15% |
| Matrix_50 | ATERF14; AT5G43410 | Not Available | | 63.09% |
| Matrix_420 | ANAC58 | Not Available | | 63.07% |
| Motif_528 | ABI5 | The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis | | 63.02% |
| Motif_89 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 62.93% |
| Matrix_465 | MYC4 | Not Available | | 62.90% |
| Matrix_322 | NST3; ANAC015; BRN2 | Not Available | | 62.70% |
| Matrix_330 | MYC2; TT8 | Not Available | | 62.66% |
| Matrix_166 | TGA4 | Not Available | | 62.56% |
| Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 62.30% |
| Matrix_129 | ABF1 | Not Available | | 61.99% |
| Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 61.93% |
| Matrix_421 | GLK1 | Not Available | | 61.66% |
| Motif_509 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 61.57% |
| Matrix_288 | RAP2.3 | Not Available | | 61.38% |
| Matrix_389 | ILR3 | Not Available | | 61.27% |
| Matrix_165 | KNAT1 | Not Available | | 60.96% |
| Motif_652 | AUXRETGA2GMGH3 | TGA-box #2 in putative auxin-resonsive element (AUXRE) E1 of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts; Hex-like element; E1 element=-249 to -203; E2 element=-241 to -224 | | 60.67% |
| Matrix_14 | ZCW32; AT5G62610 | Not Available | | 60.60% |
| Matrix_448 | ATERF6 | Not Available | | 60.43% |
| Matrix_260 | CAMTA3 | Not Available | | 60.30% |
| Motif_219 | E2Fa | The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants | | 60.15% |
| Matrix_460 | NAM; anac025; ATNAC2 | Not Available | | 60.08% |
| Motif_648 | ARE2 | ARE (antioxidant response element); antioxidant response element of mouse metallothionein-I (MT-I) gene; Consensus sequence of mouse MT-I and MT-II genes, and MT genes isolated from rat, hamster, human, sheep, chicken, Drosophila melanogaster, C. elegans; See ARE1 | | 59.85% |
| Matrix_277 | RAP2.6 | Not Available | | 59.66% |
| Matrix_138 | RRTF1 | Not Available | | 59.65% |
| Matrix_454 | AT1G77200; ATERF38; AT4G16750; AT5G52020 | Not Available | | 59.26% |
| Matrix_492 | ETT | Not Available | | 59.05% |
| Matrix_151 | ASIL1 | Not Available | | 58.93% |
| Matrix_363 | RAP2.3 | Not Available | | 58.79% |
| Matrix_332 | SPT; ALC | Not Available | | 58.72% |
| Matrix_141 | AT3G25990 | Not Available | | 58.64% |
| Matrix_281 | TCP13 | Not Available | | 58.60% |
| Motif_440 | TGA1 binding site motif | Hex motif; Binding site of Arabidopsis bZIP protein TGA1 and G box binding factor GBF1; TGA1 and members of the GBF family differ in their DNA binding properties; G-Box-like element;TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG | | 58.35% |
| Matrix_233 | MYC3 | Not Available | | 58.34% |
| Motif_625 | AtERF-4; AtERF-3 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 58.29% |
| Matrix_119 | RRTF1 | Not Available | | 58.24% |
| Motif_60 | AtERF-4; AtERF-3 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 58.17% |
| Motif_399 | UPRMOTIFIAT | Motif I in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc. | | 58.14% |
| Matrix_393 | REM1 | Not Available | | 58.09% |
| Matrix_61 | ATCBF3 | Not Available | | 58.08% |
| Matrix_474 | ANAC014; ANAC062; NTL9; TIP | Not Available | | 58.00% |
| Matrix_512 | HAT3 | Not Available | | 57.64% |
| Matrix_224 | ERF1 | Not Available | | 57.60% |
| Matrix_261 | ATERF-1 | Not Available | | 57.60% |
| Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 57.50% |
| Matrix_437 | MYC2 | Not Available | | 57.45% |
| Motif_583 | AtbZIP1 | The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding | | 57.20% |
| Matrix_409 | DEAR3 | Not Available | | 57.15% |
| Motif_158 | ZDNAFORMINGATCAB1 | Z-DNA-forming sequence found in the Arabidopsis chlorophyll a/b binding protein gene (cab1) promoter; Involved in light-dependent developmental expression of the gene; Z-box; Activation of Z-box containing promoters is regulated by downstream regulatory components, COP1 and HY5; phyB and CRY1 photoreceptors act redundantly to induce Z-box containing promoters in white light; Identification of upstream regulatory elements involved in the developmental expression of the Arabidopsis thaliana cab1 gene | | 57.12% |
| Matrix_94 | TCP5 | Not Available | | 56.99% |
| Motif_107 | O2F2BE2S1 | opaque-2 recognition site F2 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F2 is a new O2-binding sequence related to the O2 target sites of the Coix alpha-coxin, the maize b-32 genes and the AP-1 pseudopalindrome | | 56.61% |
| Matrix_70 | GATA26 | Not Available | | 56.52% |
| Matrix_516 | ANAC038; ANAC079 | Not Available | | 56.50% |
| Motif_212 | GARE2OSREP1 | Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice | | 56.43% |
| Motif_255 | B2GMAUX28 | B2; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; Located between -310 and -301; Contains a TGACGACA sequence which is similar to TGACGT/C sequence found in Ocs, CaMV35S and histone H3 promoter; Contains as-1 motif | | 56.42% |
| Matrix_321 | HRD | Not Available | | 56.33% |
| Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 56.18% |
| Matrix_418 | KNAT6; KNAT2 | Not Available | | 56.03% |
| Matrix_40 | TCP2 | Not Available | | 56.00% |
| Matrix_97 | APRR2 | Not Available | | 55.93% |
| Motif_257 | BOX1PSGS2 | Box 1 element in pea glutamine synthetase (GS2) gene; An element in a 33-bp AT-rich sequence (box 1) of the 5' end of a GS2 promoter; Located at -837 to -827 of pea GS2; Multimer of box 1 element was used to isolate a cDNA encoding an AT-rich DNA binding protein (ATBP-1) | | 55.87% |
| Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 55.86% |
| Matrix_374 | AT5G07580; AT5G61590 | Not Available | | 55.84% |
| Motif_86 | ACGTABOX | A-box according to the nomenclature of ACGT elements; One of ACGT elements; Found in ocs gene; RITA-1 binding site; G motif; G motif and TATCCAY motif (a GATA motif as its antisense sequence) are responsible for sugar repression | | 55.79% |
| Matrix_167 | ZAT6 | Not Available | | 55.76% |
| Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 55.68% |
| Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 55.60% |
| Motif_144 | DREB2A; DREB1A | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 55.40% |
| Matrix_320 | MYC4 | Not Available | | 55.30% |
| Matrix_171 | LBD3; LBD4 | Not Available | | 55.22% |
| Matrix_204 | WOX13 | Not Available | | 55.01% |
| Matrix_294 | MEE35 | Not Available | | 54.94% |
| Matrix_247 | PIF3 | Not Available | | 54.92% |
| Motif_576 | TGACGTVMAMY | TGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seeds | | 54.86% |
| Motif_453 | HEXMOTIFTAH3H4 | hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding site | | 54.86% |
| Matrix_395 | AT1G19210; ORA47; AT4G31060; AT5G21960 | Not Available | | 54.86% |
| Matrix_82 | TCP17 | Not Available | | 54.79% |
| Matrix_57 | WIN1; SHN3; SHN2 | Not Available | | 54.76% |
| Matrix_91 | CRF3 | Not Available | | 54.74% |
| Motif_378 | WRKY6 | Targets of AtWRKY6 regulation during plant senescence and pathogen defense | | 54.63% |
| Matrix_209 | RAP2.6 | Not Available | | 54.49% |
| Matrix_399 | TGA1 | Not Available | | 54.49% |
| Matrix_385 | DEAR4 | Not Available | | 54.45% |
| Matrix_122 | ABF1; AREB2 | Not Available | | 54.44% |
| Matrix_258 | WOX13 | Not Available | | 54.43% |
| Matrix_41 | anac058 | Not Available | | 54.41% |
| Matrix_188 | SPL4 | Not Available | | 54.37% |
| Matrix_303 | ATWOX13 | Not Available | | 54.33% |
| Motif_497 | ARE1 | ARE (antioxidant response element); antioxidant response element of rat glutathione S-transferase Ya subunit, and rat NAD(P)H:quinone reductase genes | | 54.26% |
| Matrix_394 | DREB_U | Not Available | | 54.24% |
| Matrix_4 | ARR14 | Not Available | | 54.23% |
| Matrix_472 | ZN_C2_H2 | Not Available | | 54.21% |
| Matrix_344 | ATERF15; AT4G18450 | Not Available | | 54.17% |
| Motif_394 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 54.13% |
| Matrix_218 | TIFY2B; TIFY1 | Not Available | | 54.11% |
| Motif_590 | MYB3 binding site motif | Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses | | 54.03% |
| Matrix_210 | ARR1 | Not Available | | 53.94% |
| Motif_33 | ACGTCBOX | C-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding site | | 53.93% |
| Matrix_300 | bZIP68; bZIP16 | Not Available | | 53.83% |
| Matrix_324 | AT2G01060 | Not Available | | 53.80% |
| Matrix_275 | ZAP1 | Characterization of a zinc-dependent transcriptional activator from Arabidopsis | | 53.67% |
| Motif_402 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 53.66% |
| Motif_319 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 53.58% |
| Motif_32 | DREB2A; DREB1A; AtTINY2; DREB1C; DREB1B | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana. Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems.Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression.Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit.Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 53.48% |
| Matrix_500 | WRKY43 | Not Available | | 53.45% |
| Motif_2 | ACGTSEED2 | ACGT motif related to seed expression; Gene: French bean phaseolin; transacting factor: 02 | | 53.41% |
| Matrix_279 | HRS1 | Not Available | | 53.39% |
| Matrix_469 | NAC041; NAC083 | Not Available | | 53.33% |
| Matrix_244 | DREB2C | Not Available | | 53.33% |
| Matrix_278 | AtbZIP44 | Not Available | | 53.31% |
| Matrix_152 | EIL1; AT5G65100 | Not Available | | 53.30% |
| Motif_406 | ABREBZMRAB28 | ABA-responsive element (ABRE B) found at -105 to -96 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues | | 53.15% |
| Matrix_16 | AT3G04450; PHL1 | Not Available | | 53.09% |
| Matrix_296 | GBF2 | Not Available | | 53.07% |
| Matrix_69 | AT2G03500 | Not Available | | 53.06% |
| Matrix_236 | CCA1 | Not Available | | 53.04% |
| Motif_95 | UPRE2AT | XBP1 binding site-like sequence found in the plant UPRE (unfolded protein response element) in Arabidopsis thaliana;Either of ERSEII or XBP1 binding sites is essential and sufficient for the UPR | | 52.99% |
| Motif_250 | ACGTOSGLUB1 | ACGT motif found in GluB-1 gene in rice; Required for endosperm-specific expression; Conserved in the 5'-flanking region of glutelin genes; Combination of GCN4, AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression | | 52.96% |
| Motif_310 | ANAERO3CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO3CONSENSUS by the PLACEdb curator | | 52.93% |
| Matrix_37 | GATA27 | Not Available | | 52.88% |
| Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 52.86% |
| Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 52.85% |
| Matrix_249 | WRKY11 | Not Available | | 52.81% |
| Motif_116 | INRNTPSADB | Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box | | 52.81% |
| Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 52.79% |
| Matrix_60 | AT1G01260; AT5G57150 | Not Available | | 52.77% |
| Matrix_334 | AT3G23230 | Not Available | | 52.74% |
| Matrix_425 | TIFY2A | Not Available | | 52.72% |
| Matrix_114 | EPR1; AT3G10113 | Not Available | | 52.64% |
| Matrix_170 | AT5G47660 | Not Available | | 52.60% |
| Matrix_173 | ZAP1 | Not Available | | 52.60% |
| Matrix_243 | RAP2.12; RAP2.2 | Not Available | | 52.59% |
| Matrix_348 | AT5G51910 | Not Available | | 52.54% |
| Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 52.41% |
| Motif_606 | NAPINMOTIFBN | Sequence found in 5' upstream region (-6, -95, -188) of napin (2S albumin) gene in Brassica napus; Interact with a protein present in crude nuclear extracts from developing B. napus seeds | | 52.41% |
| Matrix_157 | LHY; RVE2 | Not Available | | 52.32% |
| Matrix_221 | SPL7 | Not Available | | 52.29% |
| Matrix_361 | AT1G25550 | Not Available | | 52.28% |
| Motif_29 | GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 52.25% |
| Matrix_178 | HSFB2A | Not Available | | 52.21% |
| Matrix_339 | bHLH104 | Not Available | | 52.09% |
| Motif_610 | GATA-2; GATA-4; GATA-3; GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 51.96% |
| Motif_483 | ABREMOTIFAOSOSEM | motif A ABRE-like sequence found in rice Osem gene promoter; Essential for activation by VP1; Important for regulation by ABA;TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption;ABRE motif A found in the promoter of the rice Osem gene; ACGT-containing ABRE; Required for ABA-responsiveness and VP1 activation; Binding site of TRAB1; Motif A and CE3 are functionally equivalent; TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption | | 51.93% |
| Matrix_365 | AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1 | Not Available | | 51.92% |
| Matrix_80 | BIM1 | Not Available | | 51.92% |
| Motif_261 | S1FBOXSORPS1L21 | S1F box conserved both in spinach RPS1 and RPL21 genes encoding the plastid ribosomal protein S1 and L21, respectively; Negative element; Might play a role in downregulating RPS1 and RPL21 promoter activity | | 51.92% |
| Motif_598 | SORLIP3AT | one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; See also all SORLIPs and also all SORLREPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | | 51.83% |
| Matrix_333 | GATA3 | Not Available | | 51.83% |
| Matrix_438 | AtbZIP63 | Not Available | | 51.78% |
| Matrix_206 | CUC1; ANAC100 | Not Available | | 51.67% |
| Matrix_347 | WOX14; WOX10 | Not Available | | 51.67% |
| Motif_167 | SBP-box promoter motif | Molecular characterisation of the Arabidopsis SBP-box genes | | 51.66% |
| Motif_444 | OCTAMOTIF2 | Octamer motif found in histone-gene-specific consensus sequences; 200 base upstream from the initiation codon ATG; Exist in all of seven plant histone genes | | 51.65% |
| Matrix_331 | GBF1 | Not Available | | 51.64% |
| Matrix_64 | PIF5 | Not Available | | 51.57% |
| Matrix_145 | GBF4; AT5G44080 | Not Available | | 51.55% |
| Matrix_369 | AT2G18300 | Not Available | | 51.55% |
| Matrix_211 | MYB3 | Not Available | | 51.51% |
| Matrix_316 | WRKY15; WRKY39; WRKY7; WRKY74 | Not Available | | 51.48% |
| Matrix_162 | AtPHR1 | Not Available | | 51.45% |
| Matrix_450 | SPL7 | Not Available | | 51.45% |
| Matrix_307 | RGL2; RGL3 | Not Available | | 51.39% |
| Matrix_476 | bHLH115; bHLH34 | Not Available | | 51.30% |
| Matrix_377 | AT1G75490; DREB2C; AT2G40350; AT5G18450 | Not Available | | 51.25% |
| Matrix_505 | GATA8 | Not Available | | 51.20% |
| Matrix_150 | UNE10; PIF7 | Not Available | | 51.18% |
| Matrix_27 | ATAIB; ATNIG1 | Not Available | | 51.18% |
| Motif_552 | MRE1 | MRE (metal responsive element); Consensus sequence of MRE; MRE; MEP-1; MBF-1; MTF-1 | | 51.16% |
| Matrix_160 | RVE1 | Not Available | | 51.12% |
| Matrix_155 | RAP2.6; ERF110; ABR1 | Not Available | | 51.09% |
| Matrix_424 | MYB59 | Not Available | | 51.08% |
| Matrix_299 | PFG3 | Not Available | | 51.03% |
| Matrix_475 | AT5G64220 | Not Available | | 51.02% |
| Motif_585 | ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH | PRE (Pro- or hypoosmolarity-responsive element) found in the promoter region of proline dehydrogenase (ProDH) gene in Arabidopsis; Core of 9-bp sequence ACTCATCCT which is necessary for the efficient expression of ProDH in response to L-Pro and hypoosmolarity; ATB2-binding site; Similar to GCN4 motif (ATGA(C/G)TCAT); ATB2 subgroup of bZIP transcription factors function as transcriptional activator for hypoosmolarity-inducible ProDH; A Novel Subgroup of bZIP Proteins Functions as Transctiptional Activators in Hypsosmolarity-Responsive Expression of the ProDH gene in Arabidopsis | | 51.01% |
| Motif_469 | QELEMENTZMZM13 | Q(quantitative)-element in maize ZM13 gene promoter; Found at -107 to -102; Involved in expression enhancing activity; ZM13 is a maize homolog of tomato LAT52 gene; ZM13 is a pollen-specific maize gene | | 50.99% |
| Motif_286 | SEBFCONSSTPR10A | Binding site of the potato silencing element binding factor (SEBF) gene found in promoter of pathogenesis-related gene (PR-10a); Located between -45 and -39; Similar to the auxin response element | | 50.98% |
| Motif_671 | GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 50.92% |
| Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 50.90% |
| Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 50.88% |
| Matrix_144 | AT5G08330; AT5G23280 | Not Available | | 50.87% |
| Motif_620 | DREB1&2 BS in rd29a | Related to responsiveness to drought, low-temperature or high-salt stress; Binding site of DREB1 and DREB2: Binding site of Arabidopsis CBF1(C-repeat/DRE binding factor); Overexpression of DREB1A activated the expression of stress tolerance genes; CBF1 overexpression induces COR genes and enhances freezing tolerance; Heterologous CBF1 expression enhances oxidative stresses tolerance; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis;Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor | | 50.85% |
| Matrix_398 | TBP2; ATTRB2 | Not Available | | 50.83% |
| Motif_377 | SURE2STPAT21 | Sucrose Responsive Element 2 (SURE2); A motif conserved among genes regulated by sucrose; See also SURE1ST; Found between -184 and -156 bp in the patatin (a major tuber protein) gene promoter of potato | | 50.79% |
| Matrix_415 | WRKY27 | Not Available | | 50.72% |
| Matrix_484 | ATERF13 | Not Available | | 50.52% |
| Matrix_406 | ATERF-7 | Not Available | | 50.45% |
| Matrix_11 | TRFL5 | Not Available | | 50.44% |
| Matrix_373 | E2FE | Not Available | | 50.34% |
| Motif_232 | ABADESI1 | Responsive to ABA and desiccation; Motif I of rice rab16A-D (initially called rab-21); Expressed in seeds late during embryogenesis; Induced by ABA and osmotic stress in vegetative tissues; Contains ACGT motif; transacting factor: TAF-1 | | 50.33% |
| Matrix_181 | Dof5.7 | Not Available | | 50.30% |
| Motif_237 | O2F1BE2S1 | opaque-2 recognition site F1 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F1 is hybrid C/G box | | 50.25% |
| Matrix_46 | AT4G21895 | Not Available | | 50.20% |
| Matrix_383 | CCA1 | Not Available | | 50.18% |
| Matrix_354 | AHL12 | Not Available | | 50.17% |
| Matrix_255 | cdf3 | Not Available | | 50.12% |
| Matrix_45 | DRN | Not Available | | 50.11% |
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