PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_204
Name: WOX13
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_354	AHL12	Not Available	78.65%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	75.98%
Matrix_226	GATA1	Not Available	73.69%
Matrix_308	INO	Not Available	72.70%
Matrix_322	NST3; ANAC015; BRN2	Not Available	72.58%
Matrix_286	GATA7	Not Available	72.58%
Matrix_271	AT3G16350	Not Available	72.29%
Matrix_141	AT3G25990	Not Available	71.71%
Matrix_227	AT1G64620	Not Available	71.26%
Matrix_273	ANAC55	Not Available	71.13%
Matrix_259	AT1G50680; AT1G51120	Not Available	70.56%
Matrix_195	GATA2; GATA4	Not Available	70.43%
Matrix_408	GATA12	Not Available	69.42%
Matrix_463	HAT3.1	Not Available	69.13%
Matrix_143	GATA14; GATA6; GATA5	Not Available	68.98%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	68.74%
Matrix_212	ATHB-12	Not Available	68.69%
Matrix_182	ATHB6	Not Available	68.56%
Matrix_87	AT1G19000	Not Available	68.55%
Matrix_472	ZN_C2_H2	Not Available	68.30%
Matrix_502	AT3G13040	Not Available	67.90%
Matrix_521	AHL20	Not Available	67.89%
Matrix_37	GATA27	Not Available	67.71%
Matrix_70	GATA26	Not Available	67.56%
Matrix_447	RVE1	Not Available	67.50%
Matrix_418	KNAT6; KNAT2	Not Available	66.69%
Matrix_430	TOE2	Not Available	66.33%
Matrix_333	GATA3	Not Available	66.27%
Matrix_97	APRR2	Not Available	66.10%
Matrix_20	ANAC030; NST1; NAC066	Not Available	65.58%
Matrix_106	AT5G47390	Not Available	65.23%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	65.23%
Matrix_181	Dof5.7	Not Available	65.22%
Matrix_46	AT4G21895	Not Available	65.04%
Matrix_336	AT5G08520	Not Available	65.01%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	64.99%
Matrix_230	ARR11	Not Available	64.94%
Matrix_152	EIL1; AT5G65100	Not Available	64.74%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	64.54%
Matrix_311	TGA1	Not Available	64.27%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	64.24%
Matrix_491	AT1G68670; AT3G25790	Not Available	64.22%
Matrix_120	BEE2	Not Available	64.11%
Matrix_512	HAT3	Not Available	64.00%
Matrix_489	RAV1	Not Available	63.99%
Matrix_6	AT1G70000	Not Available	63.78%
Matrix_206	CUC1; ANAC100	Not Available	63.63%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	63.50%
Matrix_151	ASIL1	Not Available	63.38%
Matrix_420	ANAC58	Not Available	63.26%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	63.21%
Matrix_125	AHL12	Not Available	63.18%
Matrix_69	AT2G03500	Not Available	63.03%
Matrix_177	ADOF2	Not Available	63.02%
Matrix_17	WRKY22	Not Available	62.91%
Matrix_99	DOF4.7	Not Available	62.88%
Matrix_479	TOE1	Not Available	62.87%
Matrix_93	YAB5	Not Available	62.82%
Matrix_59	AT4G00238; AT4G00250	Not Available	62.70%
Matrix_328	AT1G76580	Not Available	62.15%
Matrix_258	WOX13	Not Available	62.04%
Matrix_72	CDF2	Not Available	62.01%
Matrix_185	AHL25	Not Available	61.89%
Matrix_350	ARR14	Not Available	61.78%
Motif_235	C8GCARGAT	Binding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15)	61.77%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	61.74%
Matrix_465	MYC4	Not Available	61.51%
Matrix_128	TGA2	Not Available	61.27%
Matrix_341	HMGA	Not Available	61.21%
Matrix_23	ANAC46	Not Available	61.03%
Matrix_389	ILR3	Not Available	60.90%
Matrix_116	ANAC55	Not Available	60.88%
Matrix_12	EIN3; EIL2	Not Available	60.88%
Matrix_440	LFY	Not Available	60.87%
Matrix_174	ZAT2	Not Available	60.77%
Matrix_330	MYC2; TT8	Not Available	60.76%
Matrix_81	YAB1	Not Available	60.66%
Matrix_411	DOF5.6	Not Available	60.64%
Matrix_8	KAN1	Not Available	60.63%
Matrix_203	GATA9; GATA12	Not Available	60.44%
Matrix_449	BIM2	Not Available	60.41%
Matrix_67	GLK1	Not Available	60.38%
Matrix_188	SPL4	Not Available	60.38%
Matrix_323	BIM3	Not Available	60.29%
Matrix_162	AtPHR1	Not Available	60.28%
Matrix_78	AT3G45610	Not Available	60.23%
Matrix_444	AT1G19485; AT4G17950	Not Available	60.13%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	60.01%
Matrix_361	AT1G25550	Not Available	59.98%
Matrix_129	ABF1	Not Available	59.95%
Matrix_248	ZFP5	Not Available	59.91%
Matrix_347	WOX14; WOX10	Not Available	59.88%
Matrix_142	ZFP8	Not Available	59.86%
Matrix_505	GATA8	Not Available	59.83%
Matrix_75	WRKY29	Not Available	59.80%
Matrix_84	AtGRF6	Not Available	59.78%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	59.49%
Matrix_4	ARR14	Not Available	59.45%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	59.38%
Matrix_10	STY1	Not Available	59.19%
Matrix_109	GBF3	Not Available	59.18%
Matrix_166	TGA4	Not Available	59.18%
Matrix_80	BIM1	Not Available	59.07%
Matrix_255	cdf3	Not Available	59.03%
Matrix_265	NGA3	Not Available	59.03%
Matrix_193	RAV1	Not Available	59.03%
Matrix_210	ARR1	Not Available	59.01%
Matrix_221	SPL7	Not Available	58.92%
Matrix_241	HB-1; AT5G44180	Not Available	58.77%
Matrix_434	ARR11	Not Available	58.73%
Matrix_307	RGL2; RGL3	Not Available	58.61%
Matrix_282	bZIP60	Not Available	58.58%
Matrix_16	AT3G04450; PHL1	Not Available	58.52%
Matrix_471	KAN4	Not Available	58.21%
Matrix_335	HSFB2A	Not Available	58.07%
Matrix_501	DAG2	Not Available	58.06%
Matrix_167	ZAT6	Not Available	57.93%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	57.93%
Matrix_442	AT5G62260	Not Available	57.89%
Matrix_101	ERF5	Not Available	57.57%
Matrix_416	ASL5	Not Available	57.56%
Matrix_370	WRKY50; WRKY51	Not Available	57.48%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	57.31%
Matrix_392	ARR2	Not Available	57.27%
Matrix_324	AT2G01060	Not Available	57.13%
Matrix_474	ANAC014; ANAC062; NTL9; TIP	Not Available	57.10%
Matrix_225	MYB52	Not Available	57.04%
Matrix_432	AT1G77920	Not Available	56.79%
Matrix_213	ATHB22	Not Available	56.78%
Matrix_41	anac058	Not Available	56.72%
Motif_615	MARTBOX	T-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)	56.69%
Matrix_168	AHL25	Not Available	56.64%
Matrix_114	EPR1; AT3G10113	Not Available	56.61%
Matrix_274	EDF3	Not Available	56.61%
Matrix_421	GLK1	Not Available	56.57%
Matrix_303	ATWOX13	Not Available	56.56%
Matrix_382	AT3G04850	Not Available	56.55%
Matrix_62	HAT5	Not Available	56.43%
Motif_642	SEF1MOTIF	SEF1 (soybean embryo factor 1) binding motif; sequence found in 5'-upstream region (-640; -765) of soybean beta-conglicinin (7S globulin) gene	56.42%
Matrix_446	LBD16	Not Available	56.40%
Matrix_157	LHY; RVE2	Not Available	56.37%
Matrix_236	CCA1	Not Available	56.33%
Matrix_171	LBD3; LBD4	Not Available	56.28%
Matrix_483	ICU4	Not Available	56.20%
Matrix_176	MYB98	Not Available	56.17%
Matrix_3	WRKY48	Not Available	56.13%
Matrix_14	ZCW32; AT5G62610	Not Available	56.01%
Matrix_96	TMO6	Not Available	55.84%
Matrix_519	ATDOF2.4	Not Available	55.78%
Matrix_431	ATHB21; HB-3	Not Available	55.77%
Matrix_100	AT1G48610	Not Available	55.76%
Matrix_296	GBF2	Not Available	55.55%
Matrix_495	HD-GL2-1; ANL2	Not Available	55.52%
Matrix_112	TBP2; TFIID-1	Not Available	55.48%
Matrix_393	REM1	Not Available	55.40%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	55.38%
Matrix_51	LFY	Not Available	55.35%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	55.25%
Matrix_211	MYB3	Not Available	55.18%
Matrix_423	AT3G04030	Not Available	55.17%
Matrix_53	MYC3	Not Available	55.17%
Matrix_456	bZIP60	Not Available	55.14%
Matrix_88	AHL12	Not Available	55.11%
Matrix_435	ATHB51	Not Available	55.04%
Matrix_228	TGA2	Not Available	55.01%
Matrix_198	STZ; C2H2; AZF3	Not Available	54.94%
Matrix_384	ATWRKY17	Not Available	54.92%
Matrix_504	WRKY40	Not Available	54.88%
Matrix_13	HAT5	Not Available	54.75%
Matrix_122	ABF1; AREB2	Not Available	54.70%
Matrix_424	MYB59	Not Available	54.60%
Matrix_287	ERF2	Not Available	54.55%
Matrix_300	bZIP68; bZIP16	Not Available	54.52%
Matrix_126	RBE	Not Available	54.50%
Matrix_38	SPL14	Not Available	54.36%
Matrix_397	GT2L	Not Available	54.36%
Matrix_239	AT5G04390	Not Available	54.19%
Motif_297	Bellringer/replumless/pennywise BS1 IN AG	Repression of AGAMOUS by BELLRINGER in Floral and Inflorescence Meristems	54.09%
Matrix_513	SOL1; TSO1; TCX2	Not Available	54.05%
Motif_153	MARABOX1	A-box found in SAR(scaffold attachment region; or matrix attachment region, MAR)	53.85%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	53.84%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	53.82%
Matrix_406	ATERF-7	Not Available	53.80%
Matrix_21	HSFC1	Not Available	53.65%
Matrix_331	GBF1	Not Available	53.61%
Matrix_302	HAT1; HAT2	Not Available	53.55%
Matrix_380	ATMYR1	Not Available	53.52%
Matrix_511	AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180	Not Available	53.43%
Matrix_355	ERF10; ERF11	Not Available	53.37%
Matrix_523	FUSCA3	Not Available	53.23%
Matrix_391	AHL20	Not Available	53.20%
Matrix_503	AT2G37430; AT3G53600	Not Available	53.20%
Matrix_178	HSFB2A	Not Available	53.18%
Matrix_135	ABI3	Not Available	53.16%
Matrix_461	ATHB12	Not Available	53.08%
Matrix_29	AP1	Not Available	52.96%
Motif_639	WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis	52.96%
Matrix_163	AT2G20110	Not Available	52.93%
Matrix_415	WRKY27	Not Available	52.86%
Motif_198	CARGATCONSENSUS	CArG consensus sequence found in the promoter of Arabidopsis SOC1 which is the MADS-box flowering-time gene; FLC is a component of the vernalization (low-temperature) pathway binds directly to this site and blocks transcriptional activation of SOC1 by CONSTANS (CO)	52.69%
Matrix_379	RHL41	Not Available	52.68%
Matrix_452	MYB46	Not Available	52.67%
Matrix_85	SPL5	Not Available	52.65%
Matrix_58	WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30	Not Available	52.64%
Matrix_66	AtLEC2	Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis	52.56%
Matrix_327	ARR11	Not Available	52.53%
Matrix_35	YAB5; YAB3	Not Available	52.50%
Matrix_487	AT1G29160	Not Available	52.45%
Matrix_362	DEAR3	Not Available	52.45%
Matrix_201	AT1G74840	Not Available	52.25%
Matrix_507	TCP3	Not Available	52.22%
Matrix_404	OBP4	Not Available	52.13%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	52.13%
Matrix_205	AGL15	Not Available	52.08%
Matrix_337	MYB46	Not Available	51.92%
Matrix_462	ATERF-8	Not Available	51.92%
Matrix_436	AT3G49930; AZF1	Not Available	51.87%
Motif_445	PDF2; ATML1	Regulation of shoot epidermal cell differentiation by a pair of homeodomain proteins in Arabidopsis. Identification of a cis-regulatory element for L1 layer-specific gene expression, which is targeted by an L1-specific homeodomain protein	51.86%
Matrix_425	TIFY2A	Not Available	51.83%
Matrix_413	RAV1	Not Available	51.82%
Matrix_298	RAV1	Not Available	51.82%
Matrix_450	SPL7	Not Available	51.74%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	51.72%
Matrix_40	TCP2	Not Available	51.70%
Matrix_374	AT5G07580; AT5G61590	Not Available	51.64%
Matrix_262	ATGRP2B; CSDP2	Not Available	51.58%
Matrix_243	RAP2.12; RAP2.2	Not Available	51.52%
Matrix_102	WRKY21	Not Available	51.45%
Matrix_494	OBP4	Not Available	51.36%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	51.30%
Matrix_390	GT-1	Not Available	51.22%
Matrix_313	ATMYB65; MYB33	Not Available	51.22%
Matrix_32	AHL25	Not Available	51.11%
Matrix_340	HSFC1	Not Available	51.04%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	51.03%
Matrix_279	HRS1	Not Available	51.03%
Matrix_318	ATHB16	Not Available	51.00%
Motif_16	-300ELEMENT	Present upstream of the promoter from the B-hordein gene of barley and the alpha-gliadin, gamma-gliadin, and low molecular weight glutenin genes of wheat; See S000001 -300CORE; See S000002 -300MOTIF	50.98%
Motif_519	MYB80	The MYB80 transcription factor is required for pollen development and the regulation of tapetal programmed cell death in Arabidopsis thaliana	50.96%
Motif_5	SORLREP1	Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	50.95%
Matrix_315	MYB111	Not Available	50.92%
Matrix_89	SOC1	Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis	50.89%
Motif_116	INRNTPSADB	Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box	50.85%
Motif_590	MYB3 binding site motif	Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses	50.78%
Matrix_54	AHL20	Not Available	50.77%
Matrix_26	ATMYB3; MYB24	Not Available	50.64%
Matrix_136	SEP3	Not Available	50.62%
Motif_570	POLASIG2	PolyA signal; poly A signal found in rice alpha-amylase; -10 to -30 in the case of animal genes	50.56%
Matrix_137	SPL1; SPL12	Not Available	50.52%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	50.47%
Matrix_254	MYB52	Not Available	50.47%
Matrix_332	SPT; ALC	Not Available	50.35%
Matrix_500	WRKY43	Not Available	50.35%
Motif_298	GMHDLGMVSPB	Binding site of the soybean homeodomein leucine zipper proteins (GmHdl56, GmHdl57); Found in the phosphate response domain of the soybean VspB promoter; Located between -536 and -527; VspB encodes vacuolar glycoprotein acid phosphatase that serve as vegetative storage protein	50.32%
Matrix_518	AT2G21230	Not Available	50.25%
Matrix_36	RAV1_1	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	50.23%
Matrix_71	ATHB7	Not Available	50.12%
Matrix_197	NAP	Not Available	50.11%
Matrix_366	ARR14	Not Available	50.09%
Motif_41	ARR2	Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators	50.05%