PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_167
Name: ZAT6
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_141	AT3G25990	Not Available	69.26%
Matrix_93	YAB5	Not Available	67.16%
Matrix_396	AP3	Not Available	64.18%
Matrix_20	ANAC030; NST1; NAC066	Not Available	63.20%
Matrix_23	ANAC46	Not Available	63.12%
Matrix_420	ANAC58	Not Available	62.26%
Matrix_259	AT1G50680; AT1G51120	Not Available	61.90%
Motif_243	TELOBOXATEEF1AA1	telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristems	61.65%
Matrix_212	ATHB-12	Not Available	61.21%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	60.92%
Matrix_72	CDF2	Not Available	60.44%
Matrix_227	AT1G64620	Not Available	60.04%
Matrix_463	HAT3.1	Not Available	59.89%
Matrix_328	AT1G76580	Not Available	59.55%
Motif_317	GAREAT	GARE (GA-responsive element); Occurrence of GARE in GA-inducible, GA-responsible, and GA-nonresponsive genes found in Arabidopsis seed germination was 20, 18, and 12%, respectively	59.54%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	59.50%
Matrix_114	EPR1; AT3G10113	Not Available	59.32%
Matrix_452	MYB46	Not Available	59.16%
Matrix_255	cdf3	Not Available	59.13%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	59.12%
Matrix_408	GATA12	Not Available	59.11%
Matrix_81	YAB1	Not Available	58.93%
Matrix_282	bZIP60	Not Available	58.81%
Matrix_109	GBF3	Not Available	58.42%
Motif_27	MYB98	MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins	58.08%
Matrix_151	ASIL1	Not Available	58.06%
Matrix_393	REM1	Not Available	57.96%
Matrix_204	WOX13	Not Available	57.93%
Matrix_447	RVE1	Not Available	57.92%
Matrix_88	AHL12	Not Available	57.80%
Matrix_159	TEM2	Not Available	57.76%
Matrix_275	ZAP1	Characterization of a zinc-dependent transcriptional activator from Arabidopsis	57.70%
Matrix_483	ICU4	Not Available	57.61%
Motif_34	LECPLEACS2	Core element in LeCp (tomato Cys protease) binding cis-element (from -715 to -675) in LeAcs2 gene	57.61%
Matrix_479	TOE1	Not Available	57.53%
Motif_116	INRNTPSADB	Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box	57.47%
Motif_358	UP2ATMSD	Up2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis	57.46%
Matrix_331	GBF1	Not Available	57.35%
Matrix_291	EDF3	Not Available	57.32%
Matrix_319	TEM1	Not Available	57.31%
Motif_614	MYBGAHV	Central element of gibberellin (GA) response complex (GARC) in high-pI alpha-amylase gene in barley; Similar to c-myb and v-myb consensus binding site; GAmyb binds specifically to the TAACAAA box in vitro; GAmyb is the sole GA-regulated transcriptional factor required for transcriptional activation of the high-pI alpha-amylase; GARC consist of the pyrimidine, TAACAAA and TATCCAC boxes; GARE in RAmy1A gene; GARE and pyrimidine box in RAmy1A are partially involved in sugar repression	57.24%
Motif_546	AtWER	Regulation of CAPRICE transcription by MYB proteins for root epidermis differentiation in Arabidopsis	57.19%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	57.18%
Matrix_434	ARR11	Not Available	57.07%
Motif_606	NAPINMOTIFBN	Sequence found in 5' upstream region (-6, -95, -188) of napin (2S albumin) gene in Brassica napus; Interact with a protein present in crude nuclear extracts from developing B. napus seeds	57.01%
Motif_142	HDZIPIIIAT	Ath b-9 HD-Zip (HD-Zip-9), a member of a small family of HD-Zip proteins (HD-ZIP III), in Arabidopsis recognize this sequence	56.81%
Matrix_286	GATA7	Not Available	56.80%
Matrix_8	KAN1	Not Available	56.78%
Matrix_308	INO	Not Available	56.75%
Matrix_14	ZCW32; AT5G62610	Not Available	56.74%
Motif_683	AtMYB2 BS in RD22	Binding site for MYB (ATMYB2) in dehydration-responsive gene, rd22; MYB binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -141 of rd22 gene; Also MYC at ca. -200 of rd22 gene; Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression	56.72%
Matrix_429	KAN4	Not Available	56.71%
Matrix_302	HAT1; HAT2	Not Available	56.46%
Matrix_258	WOX13	Not Available	56.31%
Matrix_362	DEAR3	Not Available	56.22%
Matrix_474	ANAC014; ANAC062; NTL9; TIP	Not Available	56.06%
Matrix_501	DAG2	Not Available	55.98%
Matrix_46	AT4G21895	Not Available	55.94%
Matrix_444	AT1G19485; AT4G17950	Not Available	55.92%
Motif_311	ANAC019; ANAC055; ANAC072	Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter	55.91%
Matrix_273	ANAC55	Not Available	55.89%
Matrix_322	NST3; ANAC015; BRN2	Not Available	55.85%
Matrix_228	TGA2	Not Available	55.76%
Matrix_461	ATHB12	Not Available	55.74%
Matrix_518	AT2G21230	Not Available	55.65%
Motif_260	MYB98	MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins	55.64%
Matrix_373	E2FE	Not Available	55.60%
Matrix_195	GATA2; GATA4	Not Available	55.56%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	55.50%
Matrix_59	AT4G00238; AT4G00250	Not Available	55.49%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	55.46%
Matrix_313	ATMYB65; MYB33	Not Available	55.42%
Matrix_22	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	55.42%
Matrix_178	HSFB2A	Not Available	55.31%
Motif_520	AMYBOX1	amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barley	55.31%
Matrix_394	DREB_U	Not Available	55.24%
Motif_519	MYB80	The MYB80 transcription factor is required for pollen development and the regulation of tapetal programmed cell death in Arabidopsis thaliana	55.23%
Matrix_333	GATA3	Not Available	55.22%
Matrix_70	GATA26	Not Available	55.09%
Motif_376	WRKY63	ABO3, a WRKY transcription factor, mediates plant responses to abscisic acid and drought tolerance in Arabidopsis	55.05%
Matrix_181	Dof5.7	Not Available	54.96%
Matrix_206	CUC1; ANAC100	Not Available	54.95%
Matrix_152	EIL1; AT5G65100	Not Available	54.88%
Motif_373	TATABOX1	TATA box; TATA box found in the 5'upstream region of rice alpha-amylase; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiation	54.83%
Matrix_182	ATHB6	Not Available	54.82%
Matrix_435	ATHB51	Not Available	54.82%
Matrix_120	BEE2	Not Available	54.81%
Matrix_80	BIM1	Not Available	54.77%
Matrix_165	KNAT1	Not Available	54.75%
Motif_212	GARE2OSREP1	Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice	54.71%
Matrix_188	SPL4	Not Available	54.58%
Matrix_335	HSFB2A	Not Available	54.44%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	54.38%
Matrix_38	SPL14	Not Available	54.33%
Matrix_512	HAT3	Not Available	54.28%
Matrix_436	AT3G49930; AZF1	Not Available	54.25%
Matrix_177	ADOF2	Not Available	54.20%
Matrix_226	GATA1	Not Available	54.14%
Matrix_430	TOE2	Not Available	54.07%
Matrix_423	AT3G04030	Not Available	54.06%
Motif_351	GARE1OSREP1	Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice	54.05%
Matrix_500	WRKY43	Not Available	53.92%
Matrix_198	STZ; C2H2; AZF3	Not Available	53.88%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	53.79%
Motif_378	WRKY6	Targets of AtWRKY6 regulation during plant senescence and pathogen defense	53.78%
Matrix_67	GLK1	Not Available	53.71%
Matrix_404	OBP4	Not Available	53.55%
Matrix_389	ILR3	Not Available	53.44%
Matrix_92	AT1G33760	Not Available	53.43%
Matrix_249	WRKY11	Not Available	53.28%
Motif_265	GCAACREPEATZMZEIN	GCAAC repeat found in the 22bp recognition site for beta-1 factor in the promoter of beta-zein (prolamin type) gene of maize; GCAAC is the core recognition sequence of the protein encoded by the retroviral oncogene myb	53.16%
Matrix_416	ASL5	Not Available	53.15%
Matrix_61	ATCBF3	Not Available	53.10%
Matrix_57	WIN1; SHN3; SHN2	Not Available	53.09%
Matrix_101	ERF5	Not Available	53.05%
Matrix_366	ARR14	Not Available	53.04%
Matrix_465	MYC4	Not Available	53.03%
Matrix_253	ETT	Not Available	53.00%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	53.00%
Matrix_271	AT3G16350	Not Available	52.99%
Matrix_347	WOX14; WOX10	Not Available	52.99%
Matrix_116	ANAC55	Not Available	52.97%
Matrix_472	ZN_C2_H2	Not Available	52.95%
Matrix_379	RHL41	Not Available	52.91%
Matrix_128	TGA2	Not Available	52.90%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	52.86%
Motif_184	PROXBBNNAPA	prox B (proximal portion of B-box) found in napA gene of Brassica napus; CA-rich sequence; Found between -130 and -124; Required for seed specific expression and ABA responsiveness; dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE	52.83%
Motif_70	CANBNNAPA	Core of (CA)n element in storage protein genes in Brasica napus; embryo- and endosperm-specific transcription of napin (storage protein) gene, napA; seed specificity; activator and repressor	52.83%
Matrix_143	GATA14; GATA6; GATA5	Not Available	52.83%
Matrix_99	DOF4.7	Not Available	52.77%
Matrix_431	ATHB21; HB-3	Not Available	52.77%
Matrix_37	GATA27	Not Available	52.76%
Matrix_307	RGL2; RGL3	Not Available	52.75%
Matrix_494	OBP4	Not Available	52.73%
Matrix_296	GBF2	Not Available	52.66%
Matrix_330	MYC2; TT8	Not Available	52.66%
Matrix_171	LBD3; LBD4	Not Available	52.65%
Motif_49	TATAPVTRNALEU	TATA-like motif; A TATA-like sequence found in Phaseolus vulgaris tRNALeu gene promoter; Frequently observed upstream of plant tRNA genes; Found in maize glycolytic glyceraldehyde-3-phospate dehydrogenase 4 (GapC4) gene promoter; Binding site of TATA binding protein (TBP)	52.60%
Matrix_503	AT2G37430; AT3G53600	Not Available	52.57%
Matrix_87	AT1G19000	Not Available	52.57%
Motif_502	MYB98	The MYB98 subcircuit of the synergid gene regulatory network includes genes directly and indirectly regulated by MYB98	52.50%
Matrix_78	AT3G45610	Not Available	52.49%
Matrix_21	HSFC1	Not Available	52.37%
Matrix_71	ATHB7	Not Available	52.36%
Matrix_126	RBE	Not Available	52.36%
Motif_423	MYB2	Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygen	52.33%
Matrix_385	DEAR4	Not Available	52.30%
Matrix_89	SOC1	Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis	52.30%
Matrix_244	DREB2C	Not Available	52.27%
Matrix_300	bZIP68; bZIP16	Not Available	52.19%
Matrix_380	ATMYR1	Not Available	52.17%
Matrix_85	SPL5	Not Available	52.09%
Matrix_411	DOF5.6	Not Available	52.03%
Motif_420	SORLREP2AT	one of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; See also all SORLREPs and all SORLIPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	52.01%
Matrix_449	BIM2	Not Available	51.98%
Motif_307	TATCCAYMOTIFOSRAMY3D	TATCCAY motif found in rice RAmy3D alpha-amylase gene promoter; a GATA motif as its antisense sequence; TATCCAY motif and G motif are responsible for sugar repression	51.95%
Matrix_97	APRR2	Not Available	51.95%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	51.94%
Matrix_412	GL1	Not Available	51.87%
Matrix_40	TCP2	Not Available	51.86%
Matrix_505	GATA8	Not Available	51.84%
Motif_5	SORLREP1	Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	51.83%
Motif_512	GLMHVCHORD	GLM (GCN4-like motif) found in the promoter of barley B1- and c-hordein gene; Involved in the nitrogen response of c-hordein promoter; SPA, a seed-specific basic leucine zipper protein from wheat, can activate transcription from the GCN4-like motif (GLM) of -326 LMWG-1D1 promoter	51.82%
Matrix_392	ARR2	Not Available	51.81%
Matrix_456	bZIP60	Not Available	51.81%
Motif_649	2SSEEDPROTBANAPA	Conserved in many storage-protein gene promoters; May be important for high activity of the napA promoter	51.81%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	51.77%
Matrix_160	RVE1	Not Available	51.73%
Motif_12	CEREGLUBOX2PSLEGA	cereal glutenin box in pea legumin gene (legA); sequence homologous to the cereal glutenin gene control element (-300 element)	51.72%
Matrix_323	BIM3	Not Available	51.71%
Motif_541	AtSR1	A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants	51.68%
Matrix_290	AP2	Not Available	51.60%
Motif_319	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	51.58%
Matrix_239	AT5G04390	Not Available	51.49%
Matrix_96	TMO6	Not Available	51.47%
Matrix_287	ERF2	Not Available	51.39%
Motif_410	ANAERO1CONSENSUS	One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO1CONSENSUS by the PLACEdb curator	51.39%
Matrix_491	AT1G68670; AT3G25790	Not Available	51.35%
Motif_17	AUXRETGA1GMGH3	TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts	51.31%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	51.31%
Motif_32	DREB2A; DREB1A; AtTINY2; DREB1C; DREB1B	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana. Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems.Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression.Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit.Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses	51.31%
Matrix_12	EIN3; EIL2	Not Available	51.28%
Matrix_383	CCA1	Not Available	51.20%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	51.20%
Motif_618	MYB1AT	MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis	51.17%
Matrix_277	RAP2.6	Not Available	51.16%
Matrix_168	AHL25	Not Available	51.15%
Matrix_374	AT5G07580; AT5G61590	Not Available	51.13%
Matrix_129	ABF1	Not Available	51.12%
Matrix_519	ATDOF2.4	Not Available	51.04%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	51.02%
Matrix_460	NAM; anac025; ATNAC2	Not Available	50.94%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	50.93%
Matrix_340	HSFC1	Not Available	50.91%
Matrix_311	TGA1	Not Available	50.91%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	50.90%
Matrix_265	NGA3	Not Available	50.84%
Matrix_193	RAV1	Not Available	50.84%
Motif_296	MYB98	MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins	50.82%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	50.79%
Matrix_281	TCP13	Not Available	50.77%
Matrix_418	KNAT6; KNAT2	Not Available	50.74%
Matrix_36	RAV1_1	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	50.73%
Matrix_58	WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30	Not Available	50.62%
Matrix_162	AtPHR1	Not Available	50.57%
Matrix_410	TOE2	Not Available	50.49%
Matrix_355	ERF10; ERF11	Not Available	50.47%
Motif_208	MYB80	The MYB80 transcription factor is required for pollen development and the regulation of tapetal programmed cell death in Arabidopsis thaliana	50.43%
Motif_578	BBOXSITE1STPAT	10 base pair motif (site 1) within the B-box found in the potato patatin gene promoter; Involved in potato tuber-specific and sucrose-inducible gene expression; Storekeeper (STK) binds to this region and regulates patatin expression in potato	50.43%
Matrix_341	HMGA	Not Available	50.41%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	50.32%
Matrix_511	AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180	Not Available	50.27%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	50.26%
Motif_195	TATABOX4	TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A gene; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiation	50.16%
Matrix_69	AT2G03500	Not Available	50.16%
Matrix_348	AT5G51910	Not Available	50.15%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	50.15%
Matrix_492	ETT	Not Available	50.14%
Matrix_236	CCA1	Not Available	50.04%
Matrix_221	SPL7	Not Available	50.00%