Matrix_331 | GBF1 | Not Available | | 82.27% |
Matrix_80 | BIM1 | Not Available | | 79.93% |
Matrix_109 | GBF3 | Not Available | | 78.07% |
Matrix_7 | PIF4 | Not Available | | 75.67% |
Matrix_14 | ZCW32; AT5G62610 | Not Available | | 75.65% |
Matrix_480 | BES1 | Not Available | | 74.77% |
Matrix_55 | PIF3 | Not Available | | 73.25% |
Matrix_60 | AT1G01260; AT5G57150 | Not Available | | 71.74% |
Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 71.73% |
Matrix_200 | PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815 | Not Available | | 71.23% |
Matrix_150 | UNE10; PIF7 | Not Available | | 71.08% |
Matrix_247 | PIF3 | Not Available | | 70.32% |
Matrix_511 | AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180 | Not Available | | 69.90% |
Matrix_233 | MYC3 | Not Available | | 69.89% |
Matrix_300 | bZIP68; bZIP16 | Not Available | | 69.88% |
Matrix_365 | AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1 | Not Available | | 69.78% |
Matrix_320 | MYC4 | Not Available | | 69.62% |
Matrix_449 | BIM2 | Not Available | | 69.62% |
Matrix_323 | BIM3 | Not Available | | 69.26% |
Motif_473 | ABREOSRGA1 | ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxia | | 69.17% |
Matrix_145 | GBF4; AT5G44080 | Not Available | | 69.14% |
Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 68.72% |
Matrix_153 | AP2 | Not Available | | 68.25% |
Matrix_437 | MYC2 | Not Available | | 68.10% |
Matrix_296 | GBF2 | Not Available | | 67.74% |
Matrix_330 | MYC2; TT8 | Not Available | | 67.34% |
Matrix_120 | BEE2 | Not Available | | 67.30% |
Matrix_465 | MYC4 | Not Available | | 66.96% |
Matrix_122 | ABF1; AREB2 | Not Available | | 66.86% |
Matrix_104 | PI | Not Available | | 66.57% |
Matrix_476 | bHLH115; bHLH34 | Not Available | | 65.86% |
Matrix_64 | PIF5 | Not Available | | 65.31% |
Matrix_111 | ABF3 | Not Available | | 65.15% |
Motif_237 | O2F1BE2S1 | opaque-2 recognition site F1 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F1 is hybrid C/G box | | 65.13% |
Motif_202 | OPAQUE2ZM22Z | Opaque-2 (O2) target sequence in maize 22- and 27-kD zein promoters; ACGT motif; Related to seed expression; O2 target sequence; Gene: maize 22-kD zein; transacting factor: 02 | | 65.13% |
Matrix_518 | AT2G21230 | Not Available | | 64.96% |
Matrix_90 | BEE1; BEE3; AT3G07340; AT5G48560; AT5G50915 | Not Available | | 64.63% |
Matrix_41 | anac058 | Not Available | | 64.52% |
Motif_300 | ACGTROOT1; HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. ACGT motif related to root expression; Gene: synthetic; perfect palindromic sequence (PA) containing G-box-related sequence; transacting factor: TAF-1; Binding of SGBF-1 (a Soybean G-box binding bZIP transcription factor) to ABRE is enhanced by SCOF-1 (a zinc finger protein ); Transcription of SCOF-1 is induced by low temperature and ABA | | 64.39% |
Motif_400 | ABREAZMRAB28 | ABA-responsive element (ABRE A) found at -148 to -139 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues | | 64.39% |
Motif_252 | GBOXPC | G box; Binding site of parsley cytosolic G-box binding factors (cytosolic GBFs); Cytosolic G-Box binding activity is modulated by light; DNA binding activity of cytosolic GBFs is regulated by cytosolic phosphorylation/dephospholylation activities; Cytosolic GBFs are translocated to the nucleus in a light-regulated manner | | 64.09% |
Matrix_389 | ILR3 | Not Available | | 64.06% |
Matrix_129 | ABF1 | Not Available | | 63.72% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 63.56% |
Matrix_206 | CUC1; ANAC100 | Not Available | | 63.17% |
Motif_112 | GBOX10NT | One of 11 G-box sequences in tobacco; Required for high-level constitutive expression in seed, leaf, root, axillary bud, almost all parts of flower buds and pollen | | 63.01% |
Motif_599 | LREBOXIIPCCHS1; HY5 | BoxII; Light responsive element (LRE) found in the parsley CHS-1 (chalcone synthase-1) gene promoter; Required for light responsiveness; nuclear protein binding site; Highly conserved in various light inducible gene promoters; Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 62.96% |
Motif_571 | GBOXSORBCS1 | G-box found in the spinach RBCS-1 gene promoter; Located between -219 and -212; G-box trimer confers relatively high level expression in roots | | 62.96% |
Matrix_339 | bHLH104 | Not Available | | 62.74% |
Motif_498 | SGBFGMGMAUX28 | bZIP proteins SGBF-1 and SGBF-2 binding site in soybean GmAux28 gene promoter | | 62.41% |
Motif_384 | SITEIOSPCNA | Site I of rice PCNA (proliferating cell nuclear antigen) gene; Found at -201 to -194; Resemble G-box; May contribute in part to transcriptional activation | | 62.32% |
Motif_598 | SORLIP3AT | one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; See also all SORLIPs and also all SORLREPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | | 62.29% |
Motif_197 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 62.29% |
Matrix_440 | LFY | Not Available | | 61.98% |
Motif_120 | ABRETAEM | ABRE (ABA responsive element) found in wheat Em gene; transacting factor: EMBP-1; EMBP-1 binds to CACGTGGC | | 61.65% |
Matrix_332 | SPT; ALC | Not Available | | 61.43% |
Motif_399 | UPRMOTIFIAT | Motif I in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc. | | 61.34% |
Motif_448 | IRO2OS | OsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiency | | 61.33% |
Matrix_65 | POC1; PIL1 | Not Available | | 60.96% |
Matrix_469 | NAC041; NAC083 | Not Available | | 60.82% |
Matrix_418 | KNAT6; KNAT2 | Not Available | | 60.67% |
Motif_440 | TGA1 binding site motif | Hex motif; Binding site of Arabidopsis bZIP protein TGA1 and G box binding factor GBF1; TGA1 and members of the GBF family differ in their DNA binding properties; G-Box-like element;TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG | | 60.34% |
Matrix_475 | AT5G64220 | Not Available | | 60.22% |
Matrix_44 | CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2 | Not Available | | 60.20% |
Motif_665 | ACEATCHS | ACEAtCHS (ACGT containing element) found in the LRU (light-responsive unit) in Arabidopsis chalcone synthase (CHS) gene promoter; Required for UV-B and UV-1/blue light responsiveness; Transcriptional repression by AtMYB4 controls production of UV-protecting sun screens in Arabidopsis; AtMYB4 mutant shows enhanced levels of sinapate ester in leaves and tolerance of UV-B irradiation; AtMYB4 expression is downregulated by exposure to UV-B light; Identification of UV/blue light-response elements in the Arabidopsis thaliana chalcone synthase promoter using a homologous protoplast transient expression system | | 60.01% |
Matrix_377 | AT1G75490; DREB2C; AT2G40350; AT5G18450 | Not Available | | 59.88% |
Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 59.84% |
Matrix_404 | OBP4 | Not Available | | 59.81% |
Matrix_227 | AT1G64620 | Not Available | | 59.74% |
Matrix_85 | SPL5 | Not Available | | 59.70% |
Matrix_321 | HRD | Not Available | | 59.56% |
Motif_158 | ZDNAFORMINGATCAB1 | Z-DNA-forming sequence found in the Arabidopsis chlorophyll a/b binding protein gene (cab1) promoter; Involved in light-dependent developmental expression of the gene; Z-box; Activation of Z-box containing promoters is regulated by downstream regulatory components, COP1 and HY5; phyB and CRY1 photoreceptors act redundantly to induce Z-box containing promoters in white light; Identification of upstream regulatory elements involved in the developmental expression of the Arabidopsis thaliana cab1 gene | | 59.14% |
Matrix_456 | bZIP60 | Not Available | | 59.00% |
Matrix_313 | ATMYB65; MYB33 | Not Available | | 58.62% |
Matrix_501 | DAG2 | Not Available | | 58.59% |
Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 58.32% |
Motif_636 | AMMORESVDCRNIA1 | Motif (VD) found in the Chlamydomonas Nia1 gene promoter; Located between -33 and -8; Involved in Nia1 transcription activation | | 58.26% |
Matrix_199 | AT1G69170; SPL9; SPL15; SPL13A; SPL13B | Not Available | | 58.22% |
Motif_418 | ABRE2HVA22 | ABRE2 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; see ABRE3 of HVA22 gene; see CE1 (coupling element 1 = TGCCACCGG) | | 58.20% |
Motif_379 | ABRECE1HVA22 | CE1(coupling element 1) of barley HVA22 gene; possible binding site for nuclear bZIP protein; ABA responsive complex consists of a G-box, namely ABRE3 (GCCACGTACA), and CE1 | | 58.18% |
Matrix_315 | MYB111 | Not Available | | 58.02% |
Matrix_337 | MYB46 | Not Available | | 57.87% |
Motif_542 | ABI5; AtMYC2; HY5 | A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth. Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis | | 57.85% |
Motif_179 | CACGTGMOTIF; BES1; PIF4; PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 57.76% |
Matrix_19 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | | 57.57% |
Motif_200 | GBOXLERBCS | G box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBF | | 57.37% |
Matrix_223 | MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1 | Not Available | | 57.24% |
Matrix_134 | ABF1 | Not Available | | 57.22% |
Matrix_188 | SPL4 | Not Available | | 56.72% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 56.71% |
Matrix_226 | GATA1 | Not Available | | 56.68% |
Matrix_424 | MYB59 | Not Available | | 56.61% |
Motif_162 | ABRE3HVA22 | ABRE3 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; ABA response complex 1(ABRC1)=A3(previously designated ABRE3)+CE1 | | 56.55% |
Matrix_287 | ERF2 | Not Available | | 56.54% |
Matrix_91 | CRF3 | Not Available | | 56.50% |
Matrix_72 | CDF2 | Not Available | | 56.45% |
Matrix_135 | ABI3 | Not Available | | 56.42% |
Matrix_234 | RAP2.3 | Not Available | | 56.38% |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | | 56.36% |
Matrix_451 | STY1 | Not Available | | 56.35% |
Matrix_374 | AT5G07580; AT5G61590 | Not Available | | 56.28% |
Matrix_286 | GATA7 | Not Available | | 56.28% |
Matrix_343 | AT2G33710 | Not Available | | 56.17% |
Matrix_299 | PFG3 | Not Available | | 56.16% |
Matrix_137 | SPL1; SPL12 | Not Available | | 56.13% |
Matrix_77 | PRR5 | Not Available | | 56.07% |
Motif_154 | ABREBNNAPA | ABRE of napA storage-protein gene of Brassica napus; ABA responsive element; dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE; B3 domain of ABI3 interacts with the RY/G complex | | 56.04% |
Matrix_254 | MYB52 | Not Available | | 56.02% |
Matrix_180 | SPL1 | Not Available | | 56.00% |
Matrix_463 | HAT3.1 | Not Available | | 55.86% |
Matrix_255 | cdf3 | Not Available | | 55.84% |
Matrix_79 | FUS3 | Not Available | | 55.77% |
Motif_349 | QARBNEXTA | QAR (quantitative activator region) in promoter region of Brassica napus extA extensin gene | | 55.69% |
Matrix_460 | NAM; anac025; ATNAC2 | Not Available | | 55.64% |
Matrix_446 | LBD16 | Not Available | | 55.63% |
Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 55.63% |
Motif_141 | BP5OSWX | OsBP-5 (a MYC protein) binding site in Wx promoter | | 55.61% |
Matrix_101 | ERF5 | Not Available | | 55.49% |
Motif_24 | CAMTA3 | Roles for Arabidopsis CAMTA transcription factors in cold-regulated gene expression and freezing tolerance | | 55.33% |
Matrix_378 | ATERF1 | Not Available | | 55.16% |
Motif_250 | ACGTOSGLUB1 | ACGT motif found in GluB-1 gene in rice; Required for endosperm-specific expression; Conserved in the 5'-flanking region of glutelin genes; Combination of GCN4, AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression | | 55.07% |
Matrix_406 | ATERF-7 | Not Available | | 55.03% |
Matrix_169 | E2F1 | Not Available | | 54.98% |
Matrix_243 | RAP2.12; RAP2.2 | Not Available | | 54.96% |
Matrix_273 | ANAC55 | Not Available | | 54.85% |
Motif_429 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 54.82% |
Matrix_27 | ATAIB; ATNIG1 | Not Available | | 54.75% |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | | 54.68% |
Matrix_312 | ARF11; MP; ARF6; IAA21; ARF8; ARF4 | Not Available | | 54.64% |
Motif_405 | DREB2A; DREB1A | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems. Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 54.61% |
Matrix_221 | SPL7 | Not Available | | 54.58% |
Matrix_455 | MYB111 | Not Available | | 54.55% |
Matrix_502 | AT3G13040 | Not Available | | 54.46% |
Motif_124 | ABREMOTIFIIIOSRAB16B | Motif III found in the promoter of rice rab16B gene; Motif I and motif III are both required for ABA responsiveness; However, each can substitute for the other | | 54.39% |
Matrix_164 | AT1G02030; AT2G45120; AZF2; AT3G60580 | Not Available | | 54.18% |
Matrix_261 | ATERF-1 | Not Available | | 54.18% |
Matrix_490 | AtMYB77; ATMYB44 | Not Available | | 54.08% |
Matrix_308 | INO | Not Available | | 54.07% |
Matrix_450 | SPL7 | Not Available | | 54.04% |
Motif_617 | ABRE3HVA1 | ABA responsive element, ABRE3, found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant protein; stress response | | 53.84% |
Motif_644 | ABREDISTBBNNAPA | dist B (distal portion of B-box) found in napA gene of Brassica napus; Shows similarity to ABRE; Found between -148 and -124; Required for seed specific expression and ABA responsiveness;dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE | | 53.84% |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 53.82% |
Matrix_346 | AtMYB70; MYB73 | Not Available | | 53.79% |
Motif_314 | HY5AT | G box; Binding site of Arabidopsis bZIP protein HY5; HY5 is constitutively nuclear localized and is involved in light regulation of transcriptional activity of the promoters containing the G-box;HY5 abundance peaks in early seedling development, consistent with its role in promoting photomorphogenesis; HY5 stability and activity is regulated by phosphorylation in its COP1 binding domain; HY5 regulates stimulus-induced development of root and hypocotyl | | 53.74% |
Matrix_116 | ANAC55 | Not Available | | 53.69% |
Matrix_195 | GATA2; GATA4 | Not Available | | 53.66% |
Matrix_516 | ANAC038; ANAC079 | Not Available | | 53.61% |
Matrix_171 | LBD3; LBD4 | Not Available | | 53.58% |
Motif_347 | OPAQUE2ZMB32 | opaque-2 binding site of maize b-32 (type I ribosome-inactivating protein gene); O2; O2S; O2S and GARE form a gibberellin response complex (GARC) | | 53.52% |
Motif_438 | CAMTA5; CAMTA1; CAMTA2; CAMTA3 | Roles for Arabidopsis CAMTA transcription factors in cold-regulated gene expression and freezing tolerance | | 53.44% |
Matrix_12 | EIN3; EIL2 | Not Available | | 53.36% |
Motif_2 | ACGTSEED2 | ACGT motif related to seed expression; Gene: French bean phaseolin; transacting factor: 02 | | 53.31% |
Matrix_152 | EIL1; AT5G65100 | Not Available | | 53.23% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 53.23% |
Matrix_347 | WOX14; WOX10 | Not Available | | 53.22% |
Matrix_462 | ATERF-8 | Not Available | | 53.06% |
Motif_495 | TRANSINITMONOCOTS | Context sequence of translational initiation codon in monocots | | 52.91% |
Matrix_473 | RRTF1 | Not Available | | 52.86% |
Motif_53 | ABREA2HVA1 | A2 of ABRC3; ABRC3 (ABA response complex 3) of HVA1 consists of CE3 and A2; ABA responsive element; stress response; Found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant (Lea) protein; ABRC1 OF HVA22 consists of CE1 and A3 | | 52.84% |
Matrix_151 | ASIL1 | Not Available | | 52.83% |
Matrix_408 | GATA12 | Not Available | | 52.78% |
Matrix_306 | TGA1 | TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG | | 52.73% |
Motif_344 | MSACRCYM | MSA (M-specific activator) motif in Catharanthus roseus B-type cyclin (CYM) promoter; Essential for M phase-specific expression; Found at -66 to -58 | | 52.70% |
Matrix_278 | AtbZIP44 | Not Available | | 52.69% |
Motif_567 | T/GBOXATPIN2 | T/G-box found in tomato proteinase inhibitor II (pin2) and leucine aminopeptidase (LAP) genes; Involved in jasmonate (JA) induction of these genes; bHLH-Leu zipper JAMYC2 and JAMYC10 proteins specifically recognize this motif | | 52.68% |
Motif_211 | ABREMOTIFIOSRAB16B | Motif I found in the promoter of rice rab16B gene; Motif I and motif III are both required for ABA responsiveness; However, each can substitute for the other | | 52.66% |
Matrix_113 | ABI5 | Not Available | | 52.63% |
Matrix_99 | DOF4.7 | Not Available | | 52.62% |
Matrix_436 | AT3G49930; AZF1 | Not Available | | 52.61% |
Motif_244 | ABRE-like binding site motif | Not Available | | 52.53% |
Motif_17 | AUXRETGA1GMGH3 | TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts | | 52.50% |
Motif_685 | PALINDROMICCBOXGM | Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence | | 52.50% |
Matrix_379 | RHL41 | Not Available | | 52.49% |
Matrix_126 | RBE | Not Available | | 52.47% |
Motif_406 | ABREBZMRAB28 | ABA-responsive element (ABRE B) found at -105 to -96 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues | | 52.41% |
Motif_56 | O2F3BE2S1 | opaque-2 recognition site F3 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F3 is hybrid of A/G box | | 52.41% |
Matrix_307 | RGL2; RGL3 | Not Available | | 52.41% |
Matrix_198 | STZ; C2H2; AZF3 | Not Available | | 52.30% |
Motif_541 | AtSR1 | A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants | | 52.30% |
Motif_145 | MYCATERD1 | MYC recognition sequence (from -466 to -461) necessary for expression of erd1 (early responsive to dehydration) in dehydrated Arabidopsis; NAC protein bound specifically to the CATGTG motif; NAC protein bound specifically to the CATGTG motif | | 52.24% |
Motif_625 | AtERF-4; AtERF-3 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 52.10% |
Matrix_45 | DRN | Not Available | | 52.09% |
Motif_607 | DREB2A; DREB1A | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems.Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 52.05% |
Motif_139 | RHERPATEXPA7 | Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patterns | | 52.03% |
Matrix_182 | ATHB6 | Not Available | | 51.97% |
Matrix_181 | Dof5.7 | Not Available | | 51.93% |
Matrix_503 | AT2G37430; AT3G53600 | Not Available | | 51.88% |
Motif_517 | LEAFYATAG | Target sequence of LEAFY in the intron of AGAMOUS gene in Arabidopsis | | 51.77% |
Matrix_420 | ANAC58 | Not Available | | 51.76% |
Matrix_211 | MYB3 | Not Available | | 51.71% |
Matrix_271 | AT3G16350 | Not Available | | 51.69% |
Matrix_78 | AT3G45610 | Not Available | | 51.67% |
Motif_234 | ABADESI2 | Synthetic element (hex-3) related to response to ABA and to desiccation; seed expression; Gene: synthetic; hex-3, mutant of hex-1 sequence from wheat histone H3 promoter; transacting factor: bZIP | | 51.65% |
Matrix_416 | ASL5 | Not Available | | 51.55% |
Matrix_484 | ATERF13 | Not Available | | 51.54% |
Matrix_369 | AT2G18300 | Not Available | | 51.48% |
Motif_516 | BZIP12; ABI5 | The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis | | 51.34% |
Motif_291 | ABFs binding site motif | Binding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response element | | 51.33% |
Matrix_177 | ADOF2 | Not Available | | 51.31% |
Motif_338 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 51.23% |
Motif_74 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 51.23% |
Matrix_303 | ATWOX13 | Not Available | | 51.19% |
Matrix_334 | AT3G23230 | Not Available | | 51.17% |
Matrix_239 | AT5G04390 | Not Available | | 51.01% |
Motif_214 | TAC1 | Regulation of telomerase in Arabidopsis by BT2, an apparent target of TELOMERASE ACTIVATOR1 | | 51.00% |
Motif_19 | AAGACGTAGATACL12 | Sequence found in Arabidopsis acyl carrier protein (ACP), Acl1.2, gene promoter; Contains bZIP core motif (ACGT) | | 50.99% |
Matrix_402 | TOE1 | Not Available | | 50.96% |
Matrix_229 | CDC5 | A cdc5+ homolog of a higher plant, Arabidopsis thaliana | | 50.92% |
Matrix_512 | HAT3 | Not Available | | 50.86% |
Motif_118 | CAATBOX2 | CAAT box found in the 5' upstream region (-80) of many eukaryotic genes; GGC(or T)CAATCT | | 50.86% |
Matrix_58 | WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30 | Not Available | | 50.85% |
Matrix_186 | FHY3 | Not Available | | 50.83% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 50.83% |
Matrix_146 | ORA47 | Not Available | | 50.82% |
Matrix_37 | GATA27 | Not Available | | 50.76% |
Motif_573 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 50.73% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 50.66% |
Matrix_237 | MYB55 | Not Available | | 50.62% |
Motif_568 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 50.56% |
Motif_477 | MYB1; MYB2 | An Arabidopsis myb homolog is induced by dehydration stress and its gene product binds to the conserved MYB recognition sequence;Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygen | | 50.56% |
Matrix_333 | GATA3 | Not Available | | 50.46% |
Motif_249 | DPBF1&2 binding site motif | A novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid system | | 50.43% |
Motif_183 | TRANSINITDICOTS | Context sequence of translational initiation codon in dicots | | 50.42% |
Motif_583 | AtbZIP1 | The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding | | 50.34% |
Motif_652 | AUXRETGA2GMGH3 | TGA-box #2 in putative auxin-resonsive element (AUXRE) E1 of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts; Hex-like element; E1 element=-249 to -203; E2 element=-241 to -224 | | 50.34% |
Motif_330 | ANAERO5CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO5CONSENSUS by the PLACEdb curator | | 50.33% |
Matrix_46 | AT4G21895 | Not Available | | 50.30% |
Matrix_380 | ATMYR1 | Not Available | | 50.24% |
Motif_26 | GRF7 | Arabidopsis GROWTH-REGULATING FACTOR7 Functions as a Transcriptional Repressor of Abscisic Acid- and Osmotic Stress-Responsive Genes, Including DREB2A | | 50.21% |
Matrix_154 | AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130 | Not Available | | 50.16% |
Motif_507 | ABASEED1 | ABA regulation; seed expression; Gene: carrot Dc3; Transacting factor: bZIP; Contains ACGT motif | | 50.15% |
Motif_531 | AP2SV40 | AP-2 binding site in enhancer regions of SV40 and human metallothionein IIA (hMT IIA) | | 50.12% |
Matrix_395 | AT1G19210; ORA47; AT4G31060; AT5G21960 | Not Available | | 50.11% |
Motif_354 | VSF1PVGRP18 | VSF-1 binding site in French bean grp1.8 gene promoter; VSF-1 is a tomato bZIP transcription factor; VSF-1 binding site is found in 28 bp vs-1 element; This sequence controls vascular gene expression in transgenic tobacco; VS-1 found in bean grp1.8 gene promoter; Located between -203 and -176; Partially overlaps with NRE; Confers xylem-specific expression | | 50.06% |
Matrix_230 | ARR11 | Not Available | | 50.05% |