| Matrix_84 | AtGRF6 | Not Available | | 72.01% |
| Matrix_78 | AT3G45610 | Not Available | | 71.76% |
| Matrix_436 | AT3G49930; AZF1 | Not Available | | 65.49% |
| Matrix_274 | EDF3 | Not Available | | 64.99% |
| Matrix_379 | RHL41 | Not Available | | 64.98% |
| Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 64.87% |
| Matrix_312 | ARF11; MP; ARF6; IAA21; ARF8; ARF4 | Not Available | | 64.63% |
| Matrix_503 | AT2G37430; AT3G53600 | Not Available | | 64.14% |
| Matrix_38 | SPL14 | Not Available | | 63.83% |
| Matrix_35 | YAB5; YAB3 | Not Available | | 63.52% |
| Matrix_239 | AT5G04390 | Not Available | | 63.52% |
| Matrix_198 | STZ; C2H2; AZF3 | Not Available | | 62.66% |
| Matrix_296 | GBF2 | Not Available | | 62.48% |
| Matrix_91 | CRF3 | Not Available | | 62.18% |
| Matrix_164 | AT1G02030; AT2G45120; AZF2; AT3G60580 | Not Available | | 62.06% |
| Matrix_139 | OBF5 | Not Available | | 61.93% |
| Matrix_177 | ADOF2 | Not Available | | 61.53% |
| Matrix_248 | ZFP5 | Not Available | | 61.38% |
| Matrix_360 | ORA59 | Not Available | | 61.31% |
| Matrix_27 | ATAIB; ATNIG1 | Not Available | | 61.03% |
| Matrix_395 | AT1G19210; ORA47; AT4G31060; AT5G21960 | Not Available | | 61.01% |
| Matrix_126 | RBE | Not Available | | 60.97% |
| Matrix_490 | AtMYB77; ATMYB44 | Not Available | | 60.95% |
| Matrix_300 | bZIP68; bZIP16 | Not Available | | 60.75% |
| Matrix_377 | AT1G75490; DREB2C; AT2G40350; AT5G18450 | Not Available | | 60.26% |
| Matrix_243 | RAP2.12; RAP2.2 | Not Available | | 60.19% |
| Motif_371 | DRE-like promoter motif | The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses | | 59.82% |
| Matrix_241 | HB-1; AT5G44180 | Not Available | | 59.66% |
| Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 59.49% |
| Matrix_261 | ATERF-1 | Not Available | | 59.36% |
| Matrix_484 | ATERF13 | Not Available | | 59.23% |
| Matrix_295 | ERF1 | Not Available | | 59.00% |
| Matrix_482 | AT2G25650; AT4G00270 | Not Available | | 58.79% |
| Matrix_45 | DRN | Not Available | | 58.74% |
| Motif_450 | E2FCONSENSUS | E2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plants | | 58.34% |
| Matrix_374 | AT5G07580; AT5G61590 | Not Available | | 58.15% |
| Matrix_14 | ZCW32; AT5G62610 | Not Available | | 58.03% |
| Motif_318 | CGCGBOXAT | CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs | | 57.93% |
| Matrix_292 | FTQ4 | Not Available | | 57.53% |
| Matrix_346 | AtMYB70; MYB73 | Not Available | | 57.47% |
| Matrix_344 | ATERF15; AT4G18450 | Not Available | | 57.45% |
| Matrix_448 | ATERF6 | Not Available | | 57.35% |
| Matrix_171 | LBD3; LBD4 | Not Available | | 57.14% |
| Matrix_336 | AT5G08520 | Not Available | | 57.05% |
| Motif_444 | OCTAMOTIF2 | Octamer motif found in histone-gene-specific consensus sequences; 200 base upstream from the initiation codon ATG; Exist in all of seven plant histone genes | | 56.81% |
| Matrix_151 | ASIL1 | Not Available | | 56.51% |
| Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 56.13% |
| Matrix_147 | ERF3; AT1G80580 | Not Available | | 55.97% |
| Matrix_135 | ABI3 | Not Available | | 55.88% |
| Matrix_100 | AT1G48610 | Not Available | | 55.74% |
| Matrix_50 | ATERF14; AT5G43410 | Not Available | | 55.62% |
| Matrix_433 | ATERF1 | Not Available | | 55.51% |
| Matrix_79 | FUS3 | Not Available | | 55.48% |
| Matrix_174 | ZAT2 | Not Available | | 55.38% |
| Motif_552 | MRE1 | MRE (metal responsive element); Consensus sequence of MRE; MRE; MEP-1; MBF-1; MTF-1 | | 55.29% |
| Matrix_411 | DOF5.6 | Not Available | | 55.23% |
| Matrix_334 | AT3G23230 | Not Available | | 55.21% |
| Matrix_425 | TIFY2A | Not Available | | 54.85% |
| Matrix_44 | CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2 | Not Available | | 54.79% |
| Matrix_65 | POC1; PIL1 | Not Available | | 54.79% |
| Matrix_517 | ERF12 | Not Available | | 54.61% |
| Matrix_321 | HRD | Not Available | | 54.37% |
| Matrix_475 | AT5G64220 | Not Available | | 54.24% |
| Matrix_26 | ATMYB3; MYB24 | Not Available | | 53.80% |
| Matrix_472 | ZN_C2_H2 | Not Available | | 53.74% |
| Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 53.66% |
| Matrix_233 | MYC3 | Not Available | | 53.54% |
| Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | | 53.49% |
| Matrix_287 | ERF2 | Not Available | | 53.40% |
| Matrix_328 | AT1G76580 | Not Available | | 53.40% |
| Matrix_454 | AT1G77200; ATERF38; AT4G16750; AT5G52020 | Not Available | | 53.36% |
| Matrix_142 | ZFP8 | Not Available | | 53.30% |
| Matrix_234 | RAP2.3 | Not Available | | 53.17% |
| Matrix_46 | AT4G21895 | Not Available | | 53.12% |
| Matrix_355 | ERF10; ERF11 | Not Available | | 53.00% |
| Matrix_423 | AT3G04030 | Not Available | | 52.90% |
| Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 52.80% |
| Matrix_101 | ERF5 | Not Available | | 52.40% |
| Matrix_343 | AT2G33710 | Not Available | | 52.35% |
| Matrix_509 | LEC2 | Not Available | | 52.34% |
| Matrix_210 | ARR1 | Not Available | | 52.16% |
| Matrix_437 | MYC2 | Not Available | | 52.13% |
| Matrix_420 | ANAC58 | Not Available | | 52.08% |
| Matrix_112 | TBP2; TFIID-1 | Not Available | | 51.99% |
| Matrix_311 | TGA1 | Not Available | | 51.94% |
| Matrix_53 | MYC3 | Not Available | | 51.61% |
| Matrix_5 | AT5G51190; ERF104 | Not Available | | 51.58% |
| Matrix_99 | DOF4.7 | Not Available | | 51.54% |
| Matrix_4 | ARR14 | Not Available | | 51.26% |
| Matrix_456 | bZIP60 | Not Available | | 51.22% |
| Matrix_224 | ERF1 | Not Available | | 51.19% |
| Matrix_85 | SPL5 | Not Available | | 51.03% |
| Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 50.94% |
| Matrix_260 | CAMTA3 | Not Available | | 50.86% |
| Matrix_519 | ATDOF2.4 | Not Available | | 50.84% |
| Matrix_128 | TGA2 | Not Available | | 50.71% |
| Matrix_96 | TMO6 | Not Available | | 50.71% |
| Matrix_409 | DEAR3 | Not Available | | 50.66% |
| Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 50.62% |
| Matrix_144 | AT5G08330; AT5G23280 | Not Available | | 50.46% |
| Matrix_37 | GATA27 | Not Available | | 50.45% |
| Matrix_255 | cdf3 | Not Available | | 50.37% |
| Matrix_41 | anac058 | Not Available | | 50.28% |
| Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | | 50.24% |
| Matrix_512 | HAT3 | Not Available | | 50.19% |
| Matrix_389 | ILR3 | Not Available | | 50.09% |
| Matrix_206 | CUC1; ANAC100 | Not Available | | 50.05% |
| Matrix_504 | WRKY40 | Not Available | | 50.00% |
Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench