GO |
description |
genes |
species |
ath |
atr |
cmi |
gbi |
gmo |
osa |
pab |
pgl |
pme |
ppa |
ppi |
psi |
psy |
pta |
ptr |
tba |
GO:0044257 |
cellular protein catabolic process |
3553 |
16 |
888 |
159 |
81 |
78 |
84 |
283 |
173 |
92 |
278 |
211 |
267 |
58 |
109 |
416 |
303 |
73 |
GO:0051603 |
proteolysis involved in cellular protein catabolic process |
3496 |
16 |
859 |
154 |
81 |
78 |
84 |
276 |
173 |
92 |
278 |
204 |
267 |
58 |
109 |
416 |
294 |
73 |
GO:0019941 |
modification-dependent protein catabolic process |
3088 |
16 |
775 |
148 |
66 |
65 |
70 |
269 |
138 |
73 |
236 |
189 |
189 |
42 |
93 |
390 |
285 |
60 |
GO:0043632 |
modification-dependent macromolecule catabolic process |
3088 |
16 |
775 |
148 |
66 |
65 |
70 |
269 |
138 |
73 |
236 |
189 |
189 |
42 |
93 |
390 |
285 |
60 |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
3072 |
16 |
769 |
146 |
66 |
65 |
70 |
267 |
138 |
73 |
236 |
186 |
189 |
42 |
93 |
390 |
282 |
60 |
GO:0006401 |
RNA catabolic process |
457 |
16 |
136 |
27 |
11 |
13 |
16 |
41 |
12 |
8 |
32 |
36 |
30 |
4 |
15 |
14 |
46 |
16 |
GO:0010498 |
proteasomal protein catabolic process |
395 |
16 |
223 |
22 |
6 |
4 |
5 |
32 |
3 |
4 |
9 |
24 |
8 |
2 |
3 |
3 |
45 |
2 |
GO:0006402 |
mRNA catabolic process |
374 |
16 |
121 |
18 |
11 |
13 |
13 |
26 |
9 |
7 |
27 |
30 |
24 |
3 |
11 |
12 |
34 |
15 |
GO:0043161 |
proteasome-mediated ubiquitin-dependent protein catabolic process |
306 |
16 |
139 |
21 |
6 |
4 |
5 |
31 |
3 |
4 |
9 |
23 |
8 |
2 |
3 |
3 |
43 |
2 |
GO:0000956 |
nuclear-transcribed mRNA catabolic process |
293 |
16 |
119 |
16 |
5 |
5 |
6 |
24 |
7 |
4 |
13 |
27 |
11 |
1 |
7 |
9 |
31 |
8 |
GO:0006308 |
DNA catabolic process |
169 |
16 |
10 |
6 |
2 |
3 |
5 |
8 |
17 |
10 |
40 |
5 |
17 |
6 |
9 |
12 |
9 |
10 |
GO:0034661 |
ncRNA catabolic process |
78 |
13 |
15 |
10 |
0 |
0 |
1 |
16 |
3 |
1 |
1 |
7 |
4 |
0 |
3 |
1 |
15 |
1 |
GO:0000184 |
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
72 |
12 |
12 |
5 |
0 |
0 |
4 |
8 |
6 |
0 |
5 |
8 |
6 |
0 |
3 |
1 |
10 |
4 |
GO:0010304 |
PSII associated light-harvesting complex II catabolic process |
57 |
5 |
29 |
5 |
0 |
0 |
0 |
7 |
0 |
0 |
0 |
7 |
0 |
0 |
0 |
0 |
9 |
0 |
GO:0000737 |
DNA catabolic process, endonucleolytic |
51 |
11 |
0 |
0 |
1 |
1 |
1 |
0 |
8 |
1 |
18 |
0 |
5 |
1 |
4 |
7 |
0 |
4 |
GO:0000288 |
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
50 |
15 |
6 |
4 |
3 |
2 |
2 |
5 |
0 |
2 |
3 |
5 |
3 |
1 |
2 |
3 |
7 |
2 |
GO:0031086 |
nuclear-transcribed mRNA catabolic process, deadenylation-independent decay |
50 |
5 |
9 |
6 |
0 |
0 |
0 |
10 |
0 |
0 |
0 |
13 |
0 |
0 |
0 |
0 |
12 |
0 |
GO:0031087 |
deadenylation-independent decapping of nuclear-transcribed mRNA |
50 |
5 |
9 |
6 |
0 |
0 |
0 |
10 |
0 |
0 |
0 |
13 |
0 |
0 |
0 |
0 |
12 |
0 |
GO:0016075 |
rRNA catabolic process |
48 |
13 |
7 |
6 |
0 |
0 |
1 |
10 |
3 |
1 |
1 |
3 |
4 |
0 |
3 |
1 |
7 |
1 |
GO:0016598 |
protein arginylation |
47 |
15 |
2 |
1 |
0 |
1 |
2 |
1 |
5 |
2 |
5 |
1 |
4 |
1 |
3 |
15 |
2 |
2 |
GO:0030433 |
ER-associated ubiquitin-dependent protein catabolic process |
41 |
5 |
8 |
6 |
0 |
0 |
0 |
6 |
0 |
0 |
0 |
8 |
0 |
0 |
0 |
0 |
13 |
0 |
GO:0031146 |
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
37 |
5 |
8 |
5 |
0 |
0 |
0 |
9 |
0 |
0 |
0 |
3 |
0 |
0 |
0 |
0 |
12 |
0 |
GO:0031145 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process |
37 |
14 |
4 |
3 |
2 |
2 |
4 |
3 |
1 |
2 |
4 |
2 |
4 |
0 |
1 |
2 |
3 |
0 |
GO:0010587 |
miRNA catabolic process |
30 |
5 |
8 |
4 |
0 |
0 |
0 |
6 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
0 |
8 |
0 |
GO:0006515 |
misfolded or incompletely synthesized protein catabolic process |
28 |
10 |
5 |
2 |
0 |
0 |
0 |
4 |
0 |
0 |
3 |
5 |
1 |
1 |
1 |
0 |
4 |
2 |
GO:0000289 |
nuclear-transcribed mRNA poly(A) tail shortening |
27 |
5 |
6 |
4 |
0 |
0 |
0 |
5 |
0 |
0 |
0 |
5 |
0 |
0 |
0 |
0 |
7 |
0 |
GO:0000291 |
nuclear-transcribed mRNA catabolic process, exonucleolytic |
27 |
9 |
4 |
3 |
0 |
0 |
0 |
4 |
1 |
0 |
2 |
3 |
0 |
0 |
1 |
2 |
7 |
0 |
GO:0000290 |
deadenylation-dependent decapping of nuclear-transcribed mRNA |
23 |
10 |
0 |
0 |
3 |
2 |
2 |
0 |
0 |
2 |
3 |
0 |
3 |
1 |
2 |
3 |
0 |
2 |
GO:0061013 |
regulation of mRNA catabolic process |
20 |
5 |
4 |
2 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
0 |
6 |
0 |
GO:0060211 |
regulation of nuclear-transcribed mRNA poly(A) tail shortening |
20 |
5 |
4 |
2 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
0 |
6 |
0 |
GO:1900151 |
regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
20 |
5 |
4 |
2 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
0 |
6 |
0 |
GO:0071025 |
RNA surveillance |
18 |
8 |
0 |
0 |
2 |
3 |
0 |
0 |
0 |
2 |
3 |
0 |
2 |
0 |
1 |
3 |
0 |
2 |
GO:0070966 |
nuclear-transcribed mRNA catabolic process, no-go decay |
18 |
8 |
0 |
0 |
2 |
3 |
0 |
0 |
0 |
2 |
3 |
0 |
2 |
0 |
1 |
3 |
0 |
2 |
GO:0070481 |
nuclear-transcribed mRNA catabolic process, non-stop decay |
18 |
8 |
0 |
0 |
2 |
3 |
0 |
0 |
0 |
2 |
3 |
0 |
2 |
0 |
1 |
3 |
0 |
2 |
GO:0000738 |
DNA catabolic process, exonucleolytic |
15 |
5 |
3 |
3 |
0 |
0 |
0 |
3 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
4 |
0 |
GO:0032434 |
regulation of proteasomal ubiquitin-dependent protein catabolic process |
12 |
5 |
3 |
2 |
0 |
0 |
0 |
3 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
3 |
0 |
GO:0042787 |
protein ubiquitination involved in ubiquitin-dependent protein catabolic process |
12 |
1 |
12 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0061136 |
regulation of proteasomal protein catabolic process |
12 |
5 |
3 |
2 |
0 |
0 |
0 |
3 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
3 |
0 |
GO:0000729 |
DNA double-strand break processing |
11 |
5 |
2 |
2 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
3 |
0 |
GO:0000706 |
meiotic DNA double-strand break processing |
11 |
5 |
2 |
2 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
3 |
0 |
GO:0006516 |
glycoprotein catabolic process |
8 |
5 |
4 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
GO:0032435 |
negative regulation of proteasomal ubiquitin-dependent protein catabolic process |
7 |
4 |
2 |
1 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:1901799 |
negative regulation of proteasomal protein catabolic process |
7 |
4 |
2 |
1 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0060564 |
negative regulation of mitotic anaphase-promoting complex activity |
7 |
4 |
2 |
1 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0030327 |
prenylated protein catabolic process |
6 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0034427 |
nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' |
6 |
4 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
2 |
0 |
0 |
0 |
1 |
2 |
0 |
0 |
GO:0036369 |
transcription factor catabolic process |
5 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
GO:0032436 |
positive regulation of proteasomal ubiquitin-dependent protein catabolic process |
5 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
GO:0000957 |
mitochondrial RNA catabolic process |
5 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
GO:1901483 |
regulation of transcription factor catabolic process |
5 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
GO:1901485 |
positive regulation of transcription factor catabolic process |
5 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
GO:0006285 |
base-excision repair, AP site formation |
5 |
5 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
1 |
GO:1901800 |
positive regulation of proteasomal protein catabolic process |
5 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
GO:0070407 |
oxidation-dependent protein catabolic process |
4 |
1 |
4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0043137 |
DNA replication, removal of RNA primer |
2 |
2 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0071630 |
nucleus-associated proteasomal ubiquitin-dependent protein catabolic process |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |