GO |
description |
genes |
species |
ath |
atr |
cmi |
gbi |
gmo |
osa |
pab |
pgl |
pme |
ppa |
ppi |
psi |
psy |
pta |
ptr |
tba |
GO:0006351 |
transcription, DNA-templated |
20489 |
16 |
3065 |
1084 |
423 |
497 |
478 |
1784 |
1211 |
688 |
1995 |
1423 |
1304 |
468 |
910 |
1921 |
2624 |
614 |
GO:2001141 |
regulation of RNA biosynthetic process |
17649 |
16 |
2750 |
963 |
322 |
395 |
355 |
1628 |
1052 |
561 |
1610 |
1260 |
1021 |
387 |
772 |
1678 |
2420 |
475 |
GO:0006355 |
regulation of transcription, DNA-dependent |
17643 |
16 |
2748 |
963 |
322 |
395 |
355 |
1628 |
1052 |
561 |
1610 |
1259 |
1021 |
387 |
772 |
1678 |
2417 |
475 |
GO:0045892 |
negative regulation of transcription, DNA-dependent |
1075 |
16 |
428 |
98 |
7 |
10 |
7 |
125 |
7 |
14 |
21 |
123 |
18 |
13 |
11 |
5 |
179 |
9 |
GO:0045893 |
positive regulation of transcription, DNA-dependent |
1064 |
16 |
513 |
102 |
2 |
1 |
2 |
101 |
1 |
1 |
8 |
90 |
6 |
3 |
4 |
2 |
225 |
3 |
GO:0006366 |
transcription from RNA polymerase II promoter |
1021 |
16 |
91 |
45 |
40 |
42 |
39 |
52 |
49 |
55 |
149 |
76 |
83 |
38 |
43 |
103 |
69 |
47 |
GO:0006352 |
DNA-dependent transcription, initiation |
813 |
16 |
57 |
46 |
34 |
42 |
34 |
55 |
52 |
29 |
116 |
51 |
78 |
27 |
34 |
42 |
79 |
37 |
GO:0006357 |
regulation of transcription from RNA polymerase II promoter |
560 |
16 |
35 |
29 |
18 |
22 |
22 |
31 |
28 |
25 |
89 |
53 |
43 |
20 |
23 |
51 |
42 |
29 |
GO:0006354 |
DNA-dependent transcription, elongation |
434 |
16 |
132 |
10 |
14 |
17 |
12 |
14 |
7 |
18 |
50 |
12 |
31 |
15 |
13 |
55 |
16 |
18 |
GO:0006342 |
chromatin silencing |
408 |
16 |
254 |
26 |
2 |
2 |
1 |
33 |
1 |
3 |
2 |
41 |
1 |
2 |
1 |
1 |
36 |
2 |
GO:0006367 |
transcription initiation from RNA polymerase II promoter |
255 |
16 |
15 |
13 |
11 |
14 |
9 |
17 |
19 |
14 |
36 |
18 |
21 |
11 |
11 |
14 |
23 |
9 |
GO:0006368 |
transcription elongation from RNA polymerase II promoter |
177 |
16 |
1 |
1 |
11 |
14 |
6 |
2 |
3 |
14 |
36 |
3 |
15 |
9 |
7 |
45 |
2 |
8 |
GO:0031048 |
chromatin silencing by small RNA |
165 |
5 |
119 |
11 |
0 |
0 |
0 |
11 |
0 |
0 |
0 |
14 |
0 |
0 |
0 |
0 |
10 |
0 |
GO:0032784 |
regulation of DNA-dependent transcription, elongation |
153 |
16 |
9 |
5 |
4 |
8 |
7 |
5 |
7 |
7 |
24 |
8 |
19 |
8 |
7 |
14 |
10 |
11 |
GO:0006346 |
methylation-dependent chromatin silencing |
152 |
5 |
124 |
6 |
0 |
0 |
0 |
6 |
0 |
0 |
0 |
8 |
0 |
0 |
0 |
0 |
8 |
0 |
GO:0042793 |
transcription from plastid promoter |
104 |
5 |
72 |
7 |
0 |
0 |
0 |
8 |
0 |
0 |
0 |
9 |
0 |
0 |
0 |
0 |
8 |
0 |
GO:0006383 |
transcription from RNA polymerase III promoter |
93 |
16 |
3 |
4 |
3 |
4 |
8 |
4 |
4 |
2 |
23 |
3 |
10 |
3 |
5 |
4 |
5 |
8 |
GO:0006353 |
DNA-dependent transcription, termination |
65 |
16 |
9 |
6 |
3 |
2 |
1 |
4 |
4 |
3 |
4 |
4 |
5 |
2 |
4 |
1 |
11 |
2 |
GO:0032786 |
positive regulation of DNA-dependent transcription, elongation |
57 |
16 |
2 |
2 |
2 |
6 |
2 |
1 |
3 |
5 |
11 |
2 |
7 |
4 |
1 |
4 |
3 |
2 |
GO:0051090 |
regulation of sequence-specific DNA binding transcription factor activity |
57 |
15 |
8 |
6 |
1 |
1 |
1 |
7 |
1 |
1 |
5 |
8 |
1 |
0 |
1 |
3 |
12 |
1 |
GO:0006359 |
regulation of transcription from RNA polymerase III promoter |
50 |
16 |
1 |
1 |
2 |
3 |
4 |
1 |
3 |
1 |
12 |
2 |
6 |
2 |
3 |
3 |
1 |
5 |
GO:0034243 |
regulation of transcription elongation from RNA polymerase II promoter |
43 |
16 |
1 |
1 |
1 |
5 |
1 |
2 |
3 |
3 |
10 |
3 |
3 |
2 |
1 |
4 |
2 |
1 |
GO:0006269 |
DNA replication, synthesis of RNA primer |
39 |
15 |
3 |
2 |
3 |
3 |
2 |
2 |
3 |
2 |
3 |
3 |
2 |
1 |
2 |
5 |
3 |
0 |
GO:0032968 |
positive regulation of transcription elongation from RNA polymerase II promoter |
35 |
13 |
0 |
0 |
1 |
5 |
1 |
0 |
3 |
3 |
9 |
1 |
3 |
2 |
1 |
4 |
1 |
1 |
GO:0031935 |
regulation of chromatin silencing |
35 |
5 |
14 |
4 |
0 |
0 |
0 |
5 |
0 |
0 |
0 |
6 |
0 |
0 |
0 |
0 |
6 |
0 |
GO:0016480 |
negative regulation of transcription from RNA polymerase III promoter |
30 |
16 |
1 |
1 |
1 |
2 |
2 |
1 |
2 |
1 |
8 |
2 |
4 |
1 |
1 |
1 |
1 |
1 |
GO:0043620 |
regulation of DNA-dependent transcription in response to stress |
27 |
5 |
5 |
2 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
6 |
0 |
0 |
0 |
0 |
10 |
0 |
GO:0043433 |
negative regulation of sequence-specific DNA binding transcription factor activity |
24 |
5 |
5 |
4 |
0 |
0 |
0 |
5 |
0 |
0 |
0 |
3 |
0 |
0 |
0 |
0 |
7 |
0 |
GO:0006348 |
chromatin silencing at telomere |
23 |
16 |
1 |
1 |
2 |
2 |
1 |
1 |
1 |
3 |
2 |
1 |
1 |
2 |
1 |
1 |
1 |
2 |
GO:0070919 |
production of siRNA involved in chromatin silencing by small RNA |
22 |
5 |
3 |
6 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
5 |
0 |
0 |
0 |
0 |
4 |
0 |
GO:0043618 |
regulation of transcription from RNA polymerase II promoter in response to stress |
17 |
5 |
3 |
2 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
5 |
0 |
0 |
0 |
0 |
5 |
0 |
GO:0006384 |
transcription initiation from RNA polymerase III promoter |
16 |
6 |
0 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
8 |
0 |
2 |
1 |
1 |
0 |
0 |
2 |
GO:0009303 |
rRNA transcription |
15 |
7 |
3 |
2 |
0 |
0 |
0 |
2 |
0 |
0 |
1 |
4 |
0 |
1 |
0 |
0 |
2 |
0 |
GO:0031937 |
positive regulation of chromatin silencing |
12 |
5 |
6 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0090309 |
positive regulation of methylation-dependent chromatin silencing |
12 |
5 |
6 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0009299 |
mRNA transcription |
12 |
5 |
4 |
2 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
3 |
0 |
GO:0090308 |
regulation of methylation-dependent chromatin silencing |
12 |
5 |
6 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0006344 |
maintenance of chromatin silencing |
12 |
5 |
2 |
2 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
5 |
0 |
GO:0000122 |
negative regulation of transcription from RNA polymerase II promoter |
10 |
8 |
0 |
0 |
0 |
1 |
0 |
1 |
0 |
1 |
2 |
0 |
2 |
0 |
1 |
0 |
1 |
1 |
GO:0045944 |
positive regulation of transcription from RNA polymerase II promoter |
10 |
6 |
3 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
1 |
2 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0006990 |
positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response |
9 |
5 |
3 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0043619 |
regulation of transcription from RNA polymerase II promoter in response to oxidative stress |
9 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0045013 |
carbon catabolite repression of transcription |
9 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0045014 |
negative regulation of transcription by glucose |
9 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:1901522 |
positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus |
9 |
5 |
3 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0045990 |
carbon catabolite regulation of transcription |
9 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0046015 |
regulation of transcription by glucose |
9 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
4 |
0 |
0 |
0 |
0 |
2 |
0 |
GO:0031554 |
regulation of DNA-dependent transcription, termination |
9 |
7 |
2 |
1 |
0 |
0 |
0 |
0 |
2 |
0 |
1 |
0 |
1 |
0 |
1 |
0 |
1 |
0 |
GO:0061416 |
regulation of transcription from RNA polymerase II promoter in response to salt stress |
8 |
5 |
2 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
3 |
0 |
GO:0061392 |
regulation of transcription from RNA polymerase II promoter in response to osmotic stress |
8 |
5 |
2 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
3 |
0 |
GO:0031564 |
transcription antitermination |
7 |
5 |
2 |
1 |
0 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
1 |
0 |
GO:0042794 |
rRNA transcription from plastid promoter |
7 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
3 |
0 |
0 |
0 |
0 |
1 |
0 |
GO:0031555 |
transcriptional attenuation |
7 |
5 |
2 |
1 |
0 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
1 |
0 |
GO:0010964 |
regulation of chromatin silencing by small RNA |
5 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
GO:0009304 |
tRNA transcription |
5 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
GO:0009301 |
snRNA transcription |
5 |
5 |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
GO:0006360 |
transcription from RNA polymerase I promoter |
3 |
1 |
3 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0031936 |
negative regulation of chromatin silencing |
2 |
1 |
2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0070940 |
dephosphorylation of RNA polymerase II C-terminal domain |
2 |
2 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0034244 |
negative regulation of transcription elongation from RNA polymerase II promoter |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0032785 |
negative regulation of DNA-dependent transcription, elongation |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0030466 |
chromatin silencing at silent mating-type cassette |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0006369 |
termination of RNA polymerase II transcription |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0097056 |
selenocysteinyl-tRNA(Sec) biosynthetic process |
1 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000183 |
chromatin silencing at rDNA |
1 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |