Integrative Orthology Viewer: PT05G08070 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT04G19650 PT05G08070 PT09G15870 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | PT05G08070 | 1 | ||
Tree-based ortholog | PT07G08680 PT05G08070 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G36240 AT1G77940 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G77940 | 1 | ||
Tree-based ortholog | many-to-many | AT1G77940 AT3G18740 AT1G36240 | 3 | ||
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00010G02250 ATR_00101G00390 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00101G00390 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00010G02250 ATR_00009G01510 ATR_00101G00390 | 3 | ||
Ginkgo biloba | Orthologous gene family | many-to-1 | GBI00030004 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GBI00028766 | 1 | ||
Tree-based ortholog | many-to-many | GBI00028766 GBI00030004 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G16890 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G16890 | 1 | ||
Tree-based ortholog | many-to-many | OS05G41110 OS01G59730 OS01G16890 | 3 | ||
Picea abies | Orthologous gene family | many-to-1 | PAB00049402 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PAB00011128 | 1 | ||
Tree-based ortholog | many-to-many | PAB00011128 PAB00049402 | 2 | ||
Picea glauca | Orthologous gene family | many-to-1 | PGL00022610 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PGL00027251 | 1 | ||
Tree-based ortholog | many-to-many | PGL00025795 PGL00027251 PGL00003080 ... | 5 | ||
Pseudotsuga menziesii | Orthologous gene family | many-to-1 | PME00070441 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PME00015786 | 1 | ||
Tree-based ortholog | many-to-many | PME00015786 PME00015790 PME00070441 ... | 4 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00013G02080 PP00041G01180 PP00091G00580 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00041G01180 | 1 | ||
Tree-based ortholog | many-to-many | PP00041G01180 PP00013G02080 PP00091G00580 ... | 5 | ||
Pinus pinaster | Orthologous gene family | many-to-many | PPI00020058 PPI00046667 PPI00051393 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPI00061651 | 1 | ||
Tree-based ortholog | many-to-many | PPI00061651 PPI00020058 PPI00046667 ... | 4 | ||
Picea sitchensis | Orthologous gene family | many-to-1 | PSI00012104 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PSI00020187 | 1 | ||
Tree-based ortholog | many-to-many | PSI00020187 PSI00010115 PSI00012104 | 3 | ||
Pinus taeda | Orthologous gene family | many-to-1 | PTA00010548 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PTA00016268 | 1 | ||
Tree-based ortholog | many-to-many | PTA00016268 PTA00010548 PTA00082591 ... | 7 | ||
Taxus baccata | Orthologous gene family | many-to-1 | TBA00012804 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TBA00012804 | 1 | ||
Tree-based ortholog | many-to-many | TBA00012804 TBA00004896 | 2 | ||
Cycas micholitzii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CMI00000089 | 1 | |
Tree-based ortholog | many-to-many | CMI00023405 CMI00000089 | 2 | ||
Gnetum montanum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GMO00008679 | 1 | |
Tree-based ortholog | many-to-1 | GMO00008679 | 1 | ||
Pinus sylvestris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PSY00028309 | 1 | |
Tree-based ortholog | many-to-1 | PSY00028309 | 1 |