Tree Explorer: HOM03D001524  

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Species colored phylogenetic tree with associated protein domains.
Warning
The stripped multiple sequence alignment used to infer the phylogenetic tree is only 80 amino acids long

Protein domain view



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Legend

IPR006041
    Pollen Ole e 1 allergen/extensin
IPR001623
    DnaJ domain
IPR003883
    Repetitive proline-rich cell wall protein repeat
IPR003882
    Pistil-specific extensin-like protein
IPR002100
    Transcription factor, MADS-box
Protein domains lacking coordinates are not displayed in the phylogenetic tree. This may appear to cause inconsistencies between the various pages also showing InterPro domain information.

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Multiple Sequence Alignment information

Method
muscle
Length
1158
View alignment of the entire gene family
Stripped length
80
View edited alignment used for tree construction

Outlier/stripped gene information

Gene id Status Cause
TBA00026308 removed too diverged
PPI00026428 removed too diverged
PME00104691 removed too diverged
PME00101461 removed too diverged
PAB00048852 removed too diverged
PPI00063726 removed too diverged
PSI00015396 removed too diverged
ATR_00008G00910 removed too diverged
PPI00073927 removed too diverged
PPI00019902 removed too diverged
ATR_00002G01890 removed too diverged
PPI00003887 removed too diverged
PSI00008893 removed too diverged
ATR_00009G00800 removed too diverged
PME00053329 removed too diverged
ATR_00012G03660 removed too diverged
TBA00029380 removed too diverged
PGL00018588 removed too diverged
AT5G65390 removed too diverged
PGL00028541 removed too diverged
PTA00003762 removed too diverged
PME00003953 removed too diverged
PPI00003375 removed too diverged
PPI00027941 removed partial
PPI00003280 removed partial
AT5G10430 removed outlier