Tree Explorer: HOM03D000886  

Viewing
Species colored phylogenetic tree with associated protein domains.
Warning
The stripped multiple sequence alignment used to infer the phylogenetic tree is only 27 amino acids long

Protein domain view



Archaeopteryx/Forester requires at least Java 1.5 To determine which version of Java your web browser is using, please visit javatester

Legend

IPR011016
    Zinc finger, RING-CH-type
IPR003903
    Ubiquitin interacting motif
IPR001841
    Zinc finger, RING-type
IPR013083
    Zinc finger, RING/FYVE/PHD-type
Protein domains lacking coordinates are not displayed in the phylogenetic tree. This may appear to cause inconsistencies between the various pages also showing InterPro domain information.

Download

Download Newick Download PhyloXML

Multiple Sequence Alignment information

Method
muscle
Length
606
View alignment of the entire gene family
Stripped length
27
View edited alignment used for tree construction

Outlier/stripped gene information

Gene id Status Cause
CMI00007810 removed too diverged
CMI00024074 removed partial
GMO00021587 removed partial
CMI00014766 removed partial
GBI00026687 removed partial
OS11G05230 removed outlier
PME00125985 removed outlier
PT11G06070 removed outlier
PT11G06110 removed outlier