Tree Explorer: HOM03D000090  

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Species colored phylogenetic tree with associated protein domains.
Warning
The stripped multiple sequence alignment used to infer the phylogenetic tree is only 21 amino acids long

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Protein domain view



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Legend

IPR005202
    Transcription factor GRAS
IPR017921
    Zinc finger, CTCHY-type
IPR021914
    Transcriptional factor DELLA, N-terminal
IPR003653
    Peptidase C48, SUMO/Sentrin/Ubl1
IPR000270
    Phox/Bem1p
IPR004240
    Nonaspanin (TM9SF)
IPR003311
    AUX/IAA protein
IPR003245
    Plastocyanin-like
IPR008972
    Cupredoxin
Protein domains lacking coordinates are not displayed in the phylogenetic tree. This may appear to cause inconsistencies between the various pages also showing InterPro domain information.

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Multiple Sequence Alignment information

Method
muscle
Length
2085
View alignment of the entire gene family
Stripped length
21
View edited alignment used for tree construction

Outlier/stripped gene information

Gene id Status Cause
GBI00009787 removed too diverged
PTA00043051 removed too diverged
OS11G04590 removed too diverged
ATR_00137G00340 removed too diverged
PTA00015087 removed too diverged
TBA00027730 removed partial
PTA00048373 removed partial
PAB00042525 removed partial
PTA00064646 removed partial
PT00G14470 removed partial
GBI00012346 removed partial
PAB00065929 removed partial
TBA00014809 removed partial
TBA00020053 removed partial
GBI00029005 removed partial
GBI00015862 removed partial
TBA00024000 removed partial
PGL00018925 removed partial
GBI00001964 removed partial
CMI00002120 removed partial
GBI00010373 removed partial
GBI00013129 removed partial
PAB00023561 removed partial
GBI00002622 removed partial
GBI00002024 removed partial
ATR_00001G04370 removed outlier
ATR_00012G00780 removed outlier
ATR_00012G00790 removed outlier
ATR_00036G01300 removed outlier
ATR_00045G01940 removed outlier
ATR_00045G01950 removed outlier
ATR_00045G01970 removed outlier
CMI00001338 removed outlier
CMI00003679 removed outlier
CMI00004219 removed outlier
CMI00017548 removed outlier
CMI00019335 removed outlier
CMI00025025 removed outlier
GBI00000144 removed outlier
GBI00001384 removed outlier
GBI00001476 removed outlier
GBI00002999 removed outlier
GBI00005844 removed outlier
GBI00006631 removed outlier
GBI00007642 removed outlier
GBI00008820 removed outlier
GBI00008859 removed outlier
GBI00008986 removed outlier
GBI00010978 removed outlier
GBI00011221 removed outlier
GBI00013377 removed outlier
GBI00013379 removed outlier
GBI00013535 removed outlier
GBI00015481 removed outlier
GBI00017910 removed outlier
GBI00017911 removed outlier
GBI00020840 removed outlier
GMO00006078 removed outlier
GMO00016603 removed outlier
GMO00030635 removed outlier
OS02G21685 removed outlier
OS03G37900 removed outlier
OS07G16330 removed outlier
OS08G34040 removed outlier
OS12G05060 removed outlier
PAB00043886 removed outlier
PAB00045253 removed outlier
PAB00045701 removed outlier
PAB00049206 removed outlier
PAB00064520 removed outlier
PGL00009711 removed outlier
PGL00026431 removed outlier
PME00000906 removed outlier
PME00023970 removed outlier
PME00044102 removed outlier
PME00060714 removed outlier
PME00060717 removed outlier
PME00076927 removed outlier
PP00006G01610 removed outlier
PP00101G00070 removed outlier
PP00318G00020 removed outlier
PPI00000313 removed outlier
PPI00004169 removed outlier
PPI00007544 removed outlier
PPI00035185 removed outlier
PPI00035186 removed outlier
PPI00067367 removed outlier
PPI00070195 removed outlier
PPI00072102 removed outlier
PSI00000047 removed outlier
PSI00001885 removed outlier
PSI00015728 removed outlier
PSY00010824 removed outlier
PSY00012666 removed outlier
PSY00017632 removed outlier
PSY00026228 removed outlier
PSY00026958 removed outlier
PT15G09530 removed outlier
PT17G14950 removed outlier
PTA00016482 removed outlier
PTA00024453 removed outlier
PTA00024454 removed outlier
PTA00027554 removed outlier
PTA00027555 removed outlier
PTA00027692 removed outlier
PTA00028977 removed outlier
PTA00033229 removed outlier
PTA00038600 removed outlier
PTA00038601 removed outlier
PTA00043050 removed outlier
PTA00049079 removed outlier
PTA00049815 removed outlier
PTA00050595 removed outlier
PTA00054805 removed outlier
PTA00055940 removed outlier
PTA00055941 removed outlier
PTA00062874 removed outlier
PTA00066657 removed outlier
PTA00066658 removed outlier
PTA00066659 removed outlier
PTA00067361 removed outlier
PTA00073264 removed outlier
PTA00075679 removed outlier
PTA00080677 removed outlier
PTA00080678 removed outlier
PTA00081000 removed outlier
PTA00082242 removed outlier
TBA00001272 removed outlier
TBA00003023 removed outlier
TBA00017574 removed outlier
TBA00017797 removed outlier
TBA00017798 removed outlier
TBA00020027 removed outlier
TBA00020622 removed outlier
TBA00021761 removed outlier
TBA00022586 removed outlier
TBA00022615 removed outlier
TBA00026157 removed outlier
TBA00026252 removed outlier
TBA00027162 removed outlier
TBA00027725 removed outlier
TBA00029057 removed outlier