acc:AB010957 src: str:YM ta1:Archaea Crenarchaeota Sulfolobales Sulfolobaceae Sulfolobus chg: rem: aut:Jan R., Wu J., Tsai C., Chaw S., Tsen S. ttl:A novel species of acidothermophilic archaeon: Sulfolobus yangmingensis sp, nov. jou:Unpublished dat: vol: pgs: mty: seq:Sulfolobus yangmingensis AB010957 -------------------------------------------------------------------------------- --------------------------ooU[CC-GGU]U-----GA[U-CCU]-[G-CCGG]-A[CCC--GAU{C}-CGCU ]---A[UCG-GGG-U-AG]---CACUAA--[GC-C{A--}UGG]-G--A[GUC{-GU--}ACAC-CCCC]GG-------- -------------------------------------------------------------------------------- -GCAA--------------------------------------------------------------------------- ------------------------------------------------[GGG-GGUGU-GGC]G-GA--CGG-[C-UG]- AGUA---ACA-[C-GU--GGCU{---AA}C-C{UA--C}CCU--C-GGG]------------------------------ ---------------------------A[GG-GG{G--AUAA}C-CC-CGG]-GAAA---[CU--G-GGG{AUAAUC-}C C-CC]AUA--------------------G[GG--GAGGAG{--U}CC]-------------------------------- --------UGGAAC------------------------------------------------------------------ -------------------------------------------------------------------------------- --------[GG---UU-CCUC-CC]U------------------------------------------------------ -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- --------------------------------------------------------U-AAAG[G-GGUAU----G--GGC ]UA----------------------------------------------------------------------------- ------------------------------------UUUC---------------------------------------- -------------------------------------------------------------------CC[GCU---CAUA C-CC]G---------------------------------------------[CCCG-AGG{AU---}G-GG-GCU-GC-G ]------G[CCC-(A)------U{C-----A-}GG{CU----G}UU-GG-CG-GG(G)U]----AAC-[G(G)-CCCGCC A-----A{A}CC{-U--AUA}A-(C)GGG]U-------------A[GGGG-CCGU]-GGGA--[GCGG{-GAG}C-CC-C ^CA-G]-U[UG-GGC]-AC-UGA-GAC-AAGG-[GC-CCA]G-[GCCC]U-AC------G[G-G-GC]GC--A[CC-A-G GC]---GGGAAAC--[G{U}CCC{-C-AA}UGC-GC]G----AAA--[GCG-UG{A---}GGGC]G-[CUA-CC-CCG-A ]GU---------[GCC-C-CC]--------------------------------------------------GUAA---- ----------------------------------------[GG-GGG-C]------------------------------ -------------U[UUUCCCCG--CU]CU-------------------------------------------------- ------------------AAAAA--------------------------------------------------------- --------------------[GG-CGGGG-G-AA]--UAA[GCGG-GG]-[GG-C]-AAG---U[C-UGG]U--G-UCAG C---C[GCC]GC-GG--UAAC--A[C----CAG^C-UCC-GC]G[A-G-UGG-UCG-GG]ACGC-UUA--[CUGGG--C] CUA----AAGC[GC-C-U{GU-G}G-C-C]G--------------[GCCCA--CU{A}AGUC-GCCCCU{U-A-AAGA}C CCGGG]-------------------------------------------CUCAA-------------------------- -----------------------------[C-CCGGG{AAA-----------U-}GGGGG-CGA{U-A}C-UGGUG-G-- --GC]--------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------UAG[GGGG-CG{G--G-AGA---}GGCUA-GG]--------------[GG-U--(A)CU-CCC-A-G{A--GG -A}GGG]-----GCGAAA-----[UCC{GUA-GAUC}CU--GGGA-G(G)-ACC]ACCA-GU---G[GC]--GGAG---[ GC]G------[CCU-AGCU{AGA-A}CGC{G---}C-CC]GA-------------------------------------- -------------------------C[GGU{-GAG---}AG-GC]GA-------AA[GC-CGGGG{-CAG-}C{A-AA}U -GGG]-----AU-UA--GAUAC-----[C-CCA{-G-UA}GUCC-CG-GC]-UGU-AAAC-GAU[GCG-GGC]U-A[GGU --GUCAGGU-GGGC]----------------------------------------------------------------- ----------------------UUAG------------------------------------------------------ -------------------------------------------------------------------------------- ------------A[GCU-C-ACC-UGGU----GCC]-GCA---------[GG]-GAAG--[C-C]-G-UU-AA[GCC--- ---CGC]C-[GCCU--GG]G-[G(A)G-U{A---}CGG-UC]-GCA-A-[GACU--G{AA}AC-(C)U]AA[A------G GA]A-U[UG-GC{G}GGG--GAGC-A]---CCA-CAA--[G---G-G-GU]--GG[AA-CCU-GC-GGC]--UC-AA--- [U(U)G-G]-AGUCAA-CG-[C-C(U)-G]---GA-AUC-U-UA-[CC-GGG-GG]---A-GA-[CC--GC{-AAG-G-- --UG-AC}GGC(C)A-GG]-----------------C-UAAC--------------GA---------------------- -------------------------------------------------------------------------------- -------[CCU(U)GC-C{--UGA-CUC----}GCGG]AG-----A[GG{-A}GG{UG-}CA-UG-GCC{C}--UC-G]C C-A[GC-UC]---C-[UG-UU]--GUGA-[AAUG]U--[CCU-G]-UUAAGU-[CAGG]C--------AAC[G-AG-C]G AG------AC[CCC-C]A--[CCC--CUAG-UU(U)-G{U-A}U-C-C-CCA---------------UC]---------- -------------------------------------------------------------------------------- -----------------------------------------------------------------------UCCG----- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- --------------------------------------------------------------[GAUG------------- ----------------------GG-GGC--(C)A{C----}AC-U-AGGG-G]G--A-[CU-(G)CCG----------C- C]-------------------G-UAA-----------[G-GCG-G-(A)G--G]--A--AGGA--[G--GG-G]G-CCA[ C-GG{CA--}GG-U{C---A--G}CA-UGC-CC-C]GAA----A[C-CCC-CGG]-GCC-[GC{A-}CGCGGG-UU]AC- -AAU[G---GC-AGGG{A-CAGC---}GGG]------------------------------------------------- -----------------------------------------------------------AUU[GC{GA--C}CC-C]--G AAA-[G-GG{G-G----A}GC]----CAAU------[CCC{------CCAAA}CCCU-GC-C]G-C-AGU-UG------- -GGA-U-[CGA-GGGC]-----------------------------------------------UG--AAACC--C[G-C CCUC-G]U-----GAAC-GAGG-A[AUC-CC]UAG-UA[AC--CG----CG-GG]-U---CAACA----A-[CCC-GCGG -U]-GAAUAC-GUC-CC[U-GCUCCU-UGC{A-}CA]CACC-G--CCCG-UCG---[CU--CC-(A)C--C-C{GA--A} ---AGAGGAAG-GGG--U{GA-------}GG-UCC-CCUGC]-------------------------------------- -------------CAUG--------------------------------------------------------------- -------------------------A[GUGGG-GGA-UC{G--A}ACU--------CCU-UCC-UCU{CG--A}GGG(G) GG-AG]-AA-N-UCCU-AAC-AA-CG[UAN-CCGU-AGG]GGAA-[CCU-NCG-GCUG]GAUCACCUCoo---------- -------------------------------------------------------------------------------- -------------------------* //