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Tetranychus urticae


Gene ID
tetur37g00680
Locus
tetur37g00680
Functional Description
Serine proteases, trypsin family, serine active site
Gene Type
protein-coding gene
Contig
scaffold_37
Last Modified On
19 February 2016 0h00
History

Annotator  

Name
Pedro Hernandez Crespo
Email
pedro@cib.csic.es
Lab
Lab Interaccion Planta Insecto (Felix Ortego)
Status
active

Gene Actions  

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Gene Function 

Short Name
SP49/M
Alternative Names
TETUR02g16670
Definition
Serine proteases, trypsin family, serine active site
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Read Counts 

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
serine-type endopeptidase activity

Biological Process
1.
proteolysis

Protein Domains 


Domain IDDescriptionDatabase
IPR009003 Peptidase S1, PA clan InterPro
IPR033116 Serine proteases, trypsin family, serine active site InterPro
IPR001314 Peptidase S1A, chymotrypsin family InterPro
IPR001254 Serine proteases, trypsin domain InterPro
PTHR24256 n/a PANTHER
G3DSA:2.40.10.10 n/a Gene3D
IPR018114 Peptidase S1, trypsin family, active site InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_015793591.1 PREDICTED: chymotrypsin-like elastase family member 2A [Tetranychus urticae]
Evalue: 3e-133 | Bitscore: 394
Identities = 189/189 (100%), Positives = 189/189 (100%), Gaps = 0/189 (0%)
NCBI
Show Blast
XP_015903778.1 PREDICTED: plasminogen-like [Parasteatoda tepidariorum]
Evalue: 1e-33 | Bitscore: 135
Identities = 76/186 (41%), Positives = 109/186 (59%), Gaps = 10/186 (5%)
NCBI
Show Blast
XP_013776192.1 PREDICTED: serine protease 30-like [Limulus polyphemus]
Evalue: 4e-31 | Bitscore: 125
Identities = 76/186 (41%), Positives = 103/186 (55%), Gaps = 11/186 (6%)
NCBI
Show Blast
XP_005511986.1 PREDICTED: transmembrane protease serine 11E [Columba livia]
Evalue: 2e-28 | Bitscore: 120
Identities = 64/176 (36%), Positives = 101/176 (57%), Gaps = 16/176 (9%)
NCBI
Show Blast
XP_002593216.1 hypothetical protein BRAFLDRAFT_209883 [Branchiostoma floridae]
Evalue: 2e-29 | Bitscore: 119
Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 14/173 (8%)
NCBI
Show Blast
EMC80894.1 Transmembrane protease, serine 11E2, partial [Columba livia]
Evalue: 3e-29 | Bitscore: 119
Identities = 64/176 (36%), Positives = 101/176 (57%), Gaps = 16/176 (9%)
NCBI
Show Blast
XP_002601488.1 hypothetical protein BRAFLDRAFT_241809 [Branchiostoma floridae]
Evalue: 4e-29 | Bitscore: 118
Identities = 66/182 (36%), Positives = 94/182 (52%), Gaps = 14/182 (8%)
NCBI
Show Blast
XP_010129257.1 PREDICTED: LOW QUALITY PROTEIN: transmembrane protease serine 11B-like protein [Buceros rhinoceros silvestris]
Evalue: 7e-28 | Bitscore: 118
Identities = 59/148 (40%), Positives = 94/148 (64%), Gaps = 4/148 (3%)
NCBI
Show Blast
KFQ25561.1 Transmembrane protease serine 11E [Mesitornis unicolor]
Evalue: 9e-28 | Bitscore: 118
Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 4/147 (3%)
NCBI
Show Blast
XP_010190053.1 PREDICTED: transmembrane protease serine 11E-like, partial [Mesitornis unicolor]
Evalue: 9e-28 | Bitscore: 118
Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 4/147 (3%)
NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
tetur37g00680
Redo Blast
CDS Length
570 nucleotides
CDS Sequence

Protein 

Locus ID
tetur37g00680
Redo Blast
Protein Length
190 aminoacids
Protein Sequence
Signal Peptide
na
Subcellular Localisation
na

Associated ESTs/cDNAs 

View in GenomeView|View in Artemini


EST IDCCIO5810.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA10978.b1 Support ModelY More Info
EST IDCCZA10978.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA12503.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA12780.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA3594.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZB13658.b1 Support ModelY More Info
EST IDCCZB13658.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZB2810.b1 Support ModelY More Info
EST IDCCZB2810.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZB9890.b1 Support ModelY More Info
EST IDCCZB9890.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDEXTA5881.b0 Support ModelY More Info
EST IDTetur37g00940 Support ModelY More Info
EST IDCCIO5810.b1 Support ModelY More Info
EST IDCCZA12503.b1 Support ModelY More Info
EST IDCCZA12780.b1 Support ModelY More Info
EST IDCCZA3594.b1 Support ModelY More Info
EST IDJUNC00004604.adu Support ModelY More Info
EST IDJUNC00005551.bea Support ModelY More Info
EST IDJUNC00006220.lar Support ModelY More Info
EST IDJUNC00006352.nym Support ModelY More Info
EST IDJUNC00006744.emb Support ModelY More Info
EST IDJUNC00007354.ara Support ModelY More Info
EST IDCCIO5810.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA10978.b1 Support ModelY More Info
EST IDCCZA10978.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA12503.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA12780.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA3594.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZB13658.b1 Support ModelY More Info
EST IDCCZB13658.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZB2810.b1 Support ModelY More Info
EST IDCCZB2810.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZB9890.b1 Support ModelY More Info
EST IDCCZB9890.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDEXTA5881.b0 Support ModelY More Info
EST IDTetur37g00940 Support ModelY More Info
EST IDCCIO5810.b1 Support ModelY More Info
EST IDCCZA12503.b1 Support ModelY More Info
EST IDCCZA12780.b1 Support ModelY More Info
EST IDCCZA3594.b1 Support ModelY More Info
EST IDJUNC00004604.adu Support ModelY More Info
EST IDJUNC00005551.bea Support ModelY More Info
EST IDJUNC00006220.lar Support ModelY More Info
EST IDJUNC00006352.nym Support ModelY More Info
EST IDJUNC00006744.emb Support ModelY More Info
EST IDJUNC00007354.ara Support ModelY More Info
 
General Comments
n/a"20160216000000