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Tetranychus urticae


Gene ID
tetur32g00620
Locus
tetur32g00620
Functional Description
Protease inhibitor I8; cysteine-rich trypsin inhibitor-like
Gene Type
protein-coding gene
Contig
scaffold_32
Last Modified On
19 February 2016 0h00
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
TETUR01g20250
Definition
Protease inhibitor I8; cysteine-rich trypsin inhibitor-like
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Read Counts 

Gene Ontology 

n/a
 

Protein Domains 


Domain IDDescriptionDatabase
G3DSA:2.10.25.10 n/a Gene3D
IPR002919 Trypsin Inhibitor-like, cysteine rich domain InterPro
SIGNAL_PEPTIDE Signal peptide region Phobius
SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide. Phobius
SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide. Phobius
NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region Phobius
SignalP-noTM n/a SignalP_EUK
SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide. Phobius

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_015792875.1 PREDICTED: venom peptide SjAPI-like [Tetranychus urticae]
Evalue: 3e-71 | Bitscore: 221
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
NCBI
Show Blast
XP_015127341.1 PREDICTED: chymotrypsin inhibitor-like [Diachasma alloeum]
Evalue: 1e-09 | Bitscore: 61
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 1/59 (2%)
NCBI
Show Blast
CDJ96090.1 Protease inhibitor I8 domain containing protein [Haemonchus contortus]
Evalue: 6e-09 | Bitscore: 61
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
NCBI
Show Blast
CDJ81522.1 Protease inhibitor I8 domain containing protein [Haemonchus contortus]
Evalue: 3e-07 | Bitscore: 58
Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 0/47 (0%)
NCBI
Show Blast
tetur22g00250 length:91 (mRNA) (n/a) (Protease inhibitor I8, cysteine-rich trypsin inhibitor-like)
Evalue: 9e-12 | Bitscore: 57
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (2%)
Self
Show Blast
tetur22g00250 length:91 (mRNA) (n/a) (Protease inhibitor I8, cysteine-rich trypsin inhibitor-like)
Evalue: 9e-12 | Bitscore: 57
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (2%)
Self
Show Blast
tetur22g00250 length:91 (mRNA) (n/a) (Protease inhibitor I8; cysteine-rich trypsin inhibitor-like)
Evalue: 9e-12 | Bitscore: 57
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (2%)
Self
Show Blast
tetur22g00250 length:91 (mRNA) (n/a) (Protease inhibitor I8; cysteine-rich trypsin inhibitor-like)
Evalue: 9e-12 | Bitscore: 57
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (2%)
Self
Show Blast
tetur40g00200 length:226 (mRNA) (n/a) (PREDICTED: similar to ECM 18)
Evalue: 5e-11 | Bitscore: 57
Identities = 25/48 (52%), Positives = 30/48 (63%), Gaps = 0/48 (0%)
Self
Show Blast
tetur40g00200 length:226 (mRNA) (n/a) (PREDICTED: similar to ECM 18)
Evalue: 5e-11 | Bitscore: 57
Identities = 25/48 (52%), Positives = 30/48 (63%), Gaps = 0/48 (0%)
Self
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
tetur32g00620
Redo Blast
CDS Length
372 nucleotides
CDS Sequence

Protein 

Locus ID
tetur32g00620
Redo Blast
Protein Length
124 aminoacids
Protein Sequence
Signal Peptide
na
Subcellular Localisation
na

Associated ESTs/cDNAs 

View in GenomeView|View in Artemini


EST IDJUNC00006570.bea Support ModelY More Info
EST IDJUNC00007488.nym Support ModelY More Info
EST IDJUNC00008655.ara Support ModelY More Info
EST IDJUNC00006570.bea Support ModelY More Info
EST IDJUNC00007488.nym Support ModelY More Info
EST IDJUNC00008655.ara Support ModelY More Info
 
General Comments
n/a"20160216000000