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Tetranychus urticae


Gene ID
tetur22g00250
Locus
tetur22g00250
Functional Description
Protease inhibitor I8; cysteine-rich trypsin inhibitor-like
Gene Type
protein-coding gene
Contig
scaffold_22
Last Modified On
19 February 2016 0h00
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
NA
Definition
Protease inhibitor I8; cysteine-rich trypsin inhibitor-like
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Read Counts 

Gene Ontology 

n/a
 

Protein Domains 


Domain IDDescriptionDatabase
G3DSA:2.10.25.10 n/a Gene3D
IPR002919 Trypsin Inhibitor-like, cysteine rich domain InterPro
SIGNAL_PEPTIDE Signal peptide region Phobius
SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide. Phobius
SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide. Phobius
SignalP-TM n/a SignalP_GRAM_POSITIVE
PTHR23259 n/a PANTHER
NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region Phobius
SignalP-noTM n/a SignalP_EUK
SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide. Phobius

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
tetur40g00391 length:260 (mRNA) (n/a) (n/a)
Evalue: 4e-13 | Bitscore: 62
Identities = 32/58 (55%), Positives = 36/58 (62%), Gaps = 0/58 (0%)
Self
Show Blast
tetur40g00391 length:260 (mRNA) (n/a) (n/a)
Evalue: 4e-13 | Bitscore: 62
Identities = 32/58 (55%), Positives = 36/58 (62%), Gaps = 0/58 (0%)
Self
Show Blast
tetur40g00391 length:260 (mRNA) (n/a) (n/a)
Evalue: 4e-13 | Bitscore: 62
Identities = 32/58 (55%), Positives = 36/58 (62%), Gaps = 0/58 (0%)
Self
Show Blast
tetur40g00391 length:260 (mRNA) (n/a) (n/a)
Evalue: 4e-13 | Bitscore: 62
Identities = 32/58 (55%), Positives = 36/58 (62%), Gaps = 0/58 (0%)
Self
Show Blast
XP_015793764.1 PREDICTED: zonadhesin-like [Tetranychus urticae]
Evalue: 2e-09 | Bitscore: 62
Identities = 32/58 (55%), Positives = 36/58 (62%), Gaps = 0/58 (0%)
NCBI
Show Blast
tetur40g00200 length:336 (mRNA) (n/a) (PREDICTED: similar to ECM 18)
Evalue: 2e-12 | Bitscore: 61
Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 0/49 (0%)
Self
Show Blast
tetur40g00200 length:336 (mRNA) (n/a) (PREDICTED: similar to ECM 18)
Evalue: 2e-12 | Bitscore: 61
Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 0/49 (0%)
Self
Show Blast
XP_015923897.1 PREDICTED: von Willebrand factor-like [Parasteatoda tepidariorum]
Evalue: 2e-09 | Bitscore: 61
Identities = 32/59 (54%), Positives = 37/59 (63%), Gaps = 1/59 (2%)
NCBI
Show Blast
XP_015793763.1 PREDICTED: von Willebrand factor-like [Tetranychus urticae]
Evalue: 8e-09 | Bitscore: 61
Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 0/49 (0%)
NCBI
Show Blast
tetur95g00090 length:248 (mRNA) (n/a) (PREDICTED: similar to ECM 18)
Evalue: 2e-12 | Bitscore: 60
Identities = 31/58 (53%), Positives = 36/58 (62%), Gaps = 0/58 (0%)
Self
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
tetur22g00250
Redo Blast
CDS Length
273 nucleotides
CDS Sequence

Protein 

Locus ID
tetur22g00250
Redo Blast
Protein Length
91 aminoacids
Protein Sequence
Signal Peptide
na
Subcellular Localisation
na

Associated ESTs/cDNAs 

View in GenomeView|View in Artemini


EST IDCCZA6288.b1 Support ModelY More Info
EST IDCCZA6288.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA6757.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA6288.b1 Support ModelY More Info
EST IDCCZA6288.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA6757.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
 
General Comments
n/a"20160216000000