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Tetranychus urticae


Gene ID
tetur14g00700
Locus
tetur14g00700
Functional Description
Wiskott-Aldrich syndrome
Gene Type
protein-coding gene
Contig
scaffold_14
Last Modified On
19 February 2016 0h00
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
TETUR05g10200
Definition
Wiskott-Aldrich syndrome
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Read Counts 

Gene Ontology 

Cellular Component
1.
actin cortical patch

Molecular Function
1.
actin binding

Biological Process
1.
endocytosis

2.
actin filament organization

3.
positive regulation of Arp2/3 complex-mediated actin nucleation

Protein Domains 


Domain IDDescriptionDatabase
SSF50729 n/a SUPERFAMILY
IPR003124 WH2 domain InterPro
PTHR23202 n/a PANTHER
PR01217 Proline rich extensin signature PRINTS
IPR028297 Wiskott-Aldrich syndrome protein homologue, fungal InterPro
IPR000095 CRIB domain InterPro
IPR011993 PH domain-like InterPro
IPR011026 Wiscott-Aldrich syndrome protein, C-terminal InterPro
IPR000697 WH1/EVH1 domain InterPro
Coil n/a Coils

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_015788141.1 PREDICTED: neural Wiskott-Aldrich syndrome protein-like [Tetranychus urticae]
Evalue: 0.0 | Bitscore: 531
Identities = 296/296 (100%), Positives = 296/296 (100%), Gaps = 0/296 (0%)
NCBI
Show Blast
Dappu0000009760 jgi|Dappu1|102305|fgenesh1_pg.C_scaffold_21000017
Evalue: 2e-58 | Bitscore: 205
Identities = 110/284 (39%), Positives = 160/284 (56%), Gaps = 28/284 (10%)
Insects
Show Blast
Dappu0000009760 jgi|Dappu1|102305|fgenesh1_pg.C_scaffold_21000017
Evalue: 2e-58 | Bitscore: 205
Identities = 110/284 (39%), Positives = 160/284 (56%), Gaps = 28/284 (10%)
Insects
Show Blast
Dappu0000009760 jgi|Dappu1|102305|fgenesh1_pg.C_scaffold_21000017
Evalue: 2e-58 | Bitscore: 205
Identities = 110/284 (39%), Positives = 160/284 (56%), Gaps = 28/284 (10%)
Insects
Show Blast
Dappu0000009760 jgi|Dappu1|102305|fgenesh1_pg.C_scaffold_21000017
Evalue: 2e-58 | Bitscore: 205
Identities = 110/284 (39%), Positives = 160/284 (56%), Gaps = 28/284 (10%)
Insects
Show Blast
Dappu0000009818 jgi|Dappu1|50104|e_gw1.21.187.1
Evalue: 6e-56 | Bitscore: 196
Identities = 107/268 (40%), Positives = 152/268 (57%), Gaps = 16/268 (6%)
Insects
Show Blast
Dappu0000009818 jgi|Dappu1|50104|e_gw1.21.187.1
Evalue: 6e-56 | Bitscore: 196
Identities = 107/268 (40%), Positives = 152/268 (57%), Gaps = 16/268 (6%)
Insects
Show Blast
Dappu0000009818 jgi|Dappu1|50104|e_gw1.21.187.1
Evalue: 6e-56 | Bitscore: 196
Identities = 107/268 (40%), Positives = 152/268 (57%), Gaps = 16/268 (6%)
Insects
Show Blast
Dappu0000009818 jgi|Dappu1|50104|e_gw1.21.187.1
Evalue: 6e-56 | Bitscore: 196
Identities = 107/268 (40%), Positives = 152/268 (57%), Gaps = 16/268 (6%)
Insects
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

CDS  

Locus ID
tetur14g00700
Redo Blast
CDS Length
1536 nucleotides
CDS Sequence

Protein 

Locus ID
tetur14g00700
Redo Blast
Protein Length
512 aminoacids
Protein Sequence
Signal Peptide
na
Subcellular Localisation
na

Associated ESTs/cDNAs 

View in GenomeView|View in Artemini


EST IDCCIN720.b1 Support ModelY More Info
EST IDCCIO1558.b1 Support ModelY More Info
EST IDCCIO1558.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO2043.b1 Support ModelY More Info
EST IDCCIO2559.b1 Support ModelY More Info
EST IDCCIO3355.b1 Support ModelY More Info
EST IDCCIO3355.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO3491.b1 Support ModelY More Info
EST IDCCIO5126.b1 Support ModelY More Info
EST IDCCIO5126.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO5366.b1 Support ModelY More Info
EST IDCCIO5366.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO5482.b1 Support ModelY More Info
EST IDCCIO5482.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO614.b1 Support ModelY More Info
EST IDCCIO614.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA11943.b1 Support ModelY More Info
EST IDCCZA11943.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZB7494.b1 Support ModelY More Info
EST IDCCZB7494.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDJUNC00006940.adu Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00006941.adu Support ModelY More Info
EST IDJUNC00006942.adu Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00006943.adu Support ModelY More Info
EST IDJUNC00006944.adu Support ModelY More Info
EST IDJUNC00006945.adu Support ModelY More Info
EST IDJUNC00006946.adu Support ModelY More Info
EST IDJUNC00008435.bea Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00008436.bea Support ModelY More Info
EST IDJUNC00008437.bea Support ModelY More Info
EST IDJUNC00008438.bea Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00008439.bea Support ModelY More Info
EST IDJUNC00008440.bea Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00008441.bea Support ModelY More Info
EST IDJUNC00008442.bea Support ModelY More Info
EST IDJUNC00009346.lar Support ModelY More Info
EST IDJUNC00009347.lar Support ModelY More Info
EST IDJUNC00009348.lar Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00009349.lar Support ModelY More Info
EST IDJUNC00009350.lar Support ModelY More Info
EST IDJUNC00009351.lar Support ModelY More Info
EST IDJUNC00009608.nym Support ModelY More Info
EST IDJUNC00009609.nym Support ModelY More Info
EST IDJUNC00009610.nym Support ModelY More Info
EST IDJUNC00009611.nym Support ModelY More Info
EST IDJUNC00009612.nym Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00009613.nym Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00009614.nym Support ModelY More Info
EST IDJUNC00009615.nym Support ModelY More Info
EST IDJUNC00010237.emb Support ModelY More Info
EST IDJUNC00010238.emb Support ModelY More Info
EST IDJUNC00010239.emb Support ModelY More Info
EST IDJUNC00010240.emb Support ModelY More Info
EST IDJUNC00010241.emb Support ModelY More Info
EST IDJUNC00010242.emb Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00010243.emb Support ModelY More Info
EST IDJUNC00011095.ara Support ModelY More Info
EST IDJUNC00011096.ara Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00011097.ara Support ModelY More Info
EST IDJUNC00011098.ara Support ModelY More Info
EST IDJUNC00011099.ara Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00011100.ara Support ModelY More Info
EST IDJUNC00011101.ara Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00011102.ara Support ModelY More Info
EST IDJUNC00011103.ara Support ModelY More Info
EST IDCCIN720.b1 Support ModelY More Info
EST IDCCIO1558.b1 Support ModelY More Info
EST IDCCIO1558.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO2043.b1 Support ModelY More Info
EST IDCCIO2559.b1 Support ModelY More Info
EST IDCCIO3355.b1 Support ModelY More Info
EST IDCCIO3355.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO3491.b1 Support ModelY More Info
EST IDCCIO5126.b1 Support ModelY More Info
EST IDCCIO5126.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO5366.b1 Support ModelY More Info
EST IDCCIO5366.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO5482.b1 Support ModelY More Info
EST IDCCIO5482.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO614.b1 Support ModelY More Info
EST IDCCIO614.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA11943.b1 Support ModelY More Info
EST IDCCZA11943.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZB7494.b1 Support ModelY More Info
EST IDCCZB7494.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDJUNC00006940.adu Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00006941.adu Support ModelY More Info
EST IDJUNC00006942.adu Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00006943.adu Support ModelY More Info
EST IDJUNC00006944.adu Support ModelY More Info
EST IDJUNC00006945.adu Support ModelY More Info
EST IDJUNC00006946.adu Support ModelY More Info
EST IDJUNC00008435.bea Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00008436.bea Support ModelY More Info
EST IDJUNC00008437.bea Support ModelY More Info
EST IDJUNC00008438.bea Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00008439.bea Support ModelY More Info
EST IDJUNC00008440.bea Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00008441.bea Support ModelY More Info
EST IDJUNC00008442.bea Support ModelY More Info
EST IDJUNC00009346.lar Support ModelY More Info
EST IDJUNC00009347.lar Support ModelY More Info
EST IDJUNC00009348.lar Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00009349.lar Support ModelY More Info
EST IDJUNC00009350.lar Support ModelY More Info
EST IDJUNC00009351.lar Support ModelY More Info
EST IDJUNC00009608.nym Support ModelY More Info
EST IDJUNC00009609.nym Support ModelY More Info
EST IDJUNC00009610.nym Support ModelY More Info
EST IDJUNC00009611.nym Support ModelY More Info
EST IDJUNC00009612.nym Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00009613.nym Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00009614.nym Support ModelY More Info
EST IDJUNC00009615.nym Support ModelY More Info
EST IDJUNC00010237.emb Support ModelY More Info
EST IDJUNC00010238.emb Support ModelY More Info
EST IDJUNC00010239.emb Support ModelY More Info
EST IDJUNC00010240.emb Support ModelY More Info
EST IDJUNC00010241.emb Support ModelY More Info
EST IDJUNC00010242.emb Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00010243.emb Support ModelY More Info
EST IDJUNC00011095.ara Support ModelY More Info
EST IDJUNC00011096.ara Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00011097.ara Support ModelY More Info
EST IDJUNC00011098.ara Support ModelY More Info
EST IDJUNC00011099.ara Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00011100.ara Support ModelY More Info
EST IDJUNC00011101.ara Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00011102.ara Support ModelY More Info
EST IDJUNC00011103.ara Support ModelY More Info
EST IDCCIO2043.g2 Support ModelN More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO3491.g1 Support ModelY More Info
Comment EST is mapped on the opposite strand of the predicted model
EST IDCCZB4318.b1 Support ModelY More Info
EST IDCCIN720.b1 Support ModelY More Info
EST IDCCIO1558.b1 Support ModelY More Info
EST IDCCIO1558.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO2043.b1 Support ModelY More Info
EST IDCCIO2559.b1 Support ModelY More Info
EST IDCCIO3355.b1 Support ModelY More Info
EST IDCCIO3355.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO3491.b1 Support ModelY More Info
EST IDCCIO5126.b1 Support ModelY More Info
EST IDCCIO5126.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO5366.b1 Support ModelY More Info
EST IDCCIO5366.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO5482.b1 Support ModelY More Info
EST IDCCIO5482.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO614.b1 Support ModelY More Info
EST IDCCIO614.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZA11943.b1 Support ModelY More Info
EST IDCCZA11943.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCZB7494.b1 Support ModelY More Info
EST IDCCZB7494.g1 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDJUNC00006940.adu Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00006941.adu Support ModelY More Info
EST IDJUNC00006942.adu Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00006943.adu Support ModelY More Info
EST IDJUNC00006944.adu Support ModelY More Info
EST IDJUNC00006945.adu Support ModelY More Info
EST IDJUNC00006946.adu Support ModelY More Info
EST IDJUNC00008435.bea Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00008436.bea Support ModelY More Info
EST IDJUNC00008437.bea Support ModelY More Info
EST IDJUNC00008438.bea Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00008439.bea Support ModelY More Info
EST IDJUNC00008440.bea Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00008441.bea Support ModelY More Info
EST IDJUNC00008442.bea Support ModelY More Info
EST IDJUNC00009346.lar Support ModelY More Info
EST IDJUNC00009347.lar Support ModelY More Info
EST IDJUNC00009348.lar Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00009349.lar Support ModelY More Info
EST IDJUNC00009350.lar Support ModelY More Info
EST IDJUNC00009351.lar Support ModelY More Info
EST IDJUNC00009608.nym Support ModelY More Info
EST IDJUNC00009609.nym Support ModelY More Info
EST IDJUNC00009610.nym Support ModelY More Info
EST IDJUNC00009611.nym Support ModelY More Info
EST IDJUNC00009612.nym Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00009613.nym Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00009614.nym Support ModelY More Info
EST IDJUNC00009615.nym Support ModelY More Info
EST IDJUNC00010237.emb Support ModelY More Info
EST IDJUNC00010238.emb Support ModelY More Info
EST IDJUNC00010239.emb Support ModelY More Info
EST IDJUNC00010240.emb Support ModelY More Info
EST IDJUNC00010241.emb Support ModelY More Info
EST IDJUNC00010242.emb Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00010243.emb Support ModelY More Info
EST IDJUNC00011095.ara Support ModelY More Info
EST IDJUNC00011096.ara Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00011097.ara Support ModelY More Info
EST IDJUNC00011098.ara Support ModelY More Info
EST IDJUNC00011099.ara Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00011100.ara Support ModelY More Info
EST IDJUNC00011101.ara Support ModelN More Info
CommentEST is inconsistent with the given gene model.
EST IDJUNC00011102.ara Support ModelY More Info
EST IDJUNC00011103.ara Support ModelY More Info
EST IDCCIO2043.g2 Support ModelN More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDCCIO3491.g1 Support ModelY More Info
Comment EST is mapped on the opposite strand of the predicted model
EST IDCCZB4318.b1 Support ModelY More Info
 
General Comments
n/a"20160216000000