- Gene ID
- tetur11g04270
- Locus
- tetur11g04270
- Functional Description
- dorsal
- Gene Type
- protein-coding gene
- Contig
- scaffold_11
- Last Modified On
- 19 February 2016 0h00
- History
-
Annotator
- Name
- Élio Sucena
- Email
- esucena@igc.gulbenkian.pt
- Lab
- Evolution & Development - Instituto Gulbenkian de Ciência - Portugal
- Status
- active
Gene Actions
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Gene Function
- Short Name
- dl
- Alternative Names
- TETUR01g26560
- Definition
- dorsal
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Read Counts
Gene Ontology
- Cellular Component
-
1.
nucleus
2.
cytoplasm
- Molecular Function
-
1.
DNA binding
2.
DNA-binding transcription factor activity
3.
protein binding
- Biological Process
-
1.
regulation of transcription, DNA-templated
2.
regulation of transcription by RNA polymerase II
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR008967 |
p53-like transcription factor, DNA-binding |
InterPro |
|
IPR014756 |
Immunoglobulin E-set |
InterPro |
|
IPR032397 |
Rel homology dimerisation domain |
InterPro |
|
IPR030492 |
Rel homology domain, conserved site |
InterPro |
|
IPR002909 |
IPT domain |
InterPro |
|
IPR000451 |
NF-kappa-B/Dorsal |
InterPro |
|
IPR013783 |
Immunoglobulin-like fold |
InterPro |
|
IPR011539 |
Rel homology domain (RHD), DNA-binding domain |
InterPro |
|
IPR011363 |
Dorsal-related immunity factor Dif |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_015786990.1 |
PREDICTED: putative transcription factor p65 homolog [Tetranychus urticae]
Evalue: 0.0 | Bitscore: 1145
Identities = 624/624 (100%), Positives = 624/624 (100%), Gaps = 0/624 (0%) |
NCBI |
Show Blast
|
| XP_013777220.1 |
PREDICTED: embryonic polarity protein dorsal-like [Limulus polyphemus]
Evalue: 1e-160 | Bitscore: 486
Identities = 222/309 (72%), Positives = 269/309 (87%), Gaps = 2/309 (1%) |
NCBI |
Show Blast
|
| AAZ40333.1 |
NFkB [Carcinoscorpius rotundicauda]
Evalue: 1e-158 | Bitscore: 479
Identities = 224/323 (69%), Positives = 271/323 (84%), Gaps = 7/323 (2%) |
NCBI |
Show Blast
|
| KPM10359.1 |
embryonic polarity protein dorsal-like protein [Sarcoptes scabiei]
Evalue: 8e-158 | Bitscore: 479
Identities = 220/295 (75%), Positives = 254/295 (86%), Gaps = 1/295 (0%) |
NCBI |
Show Blast
|
| XP_012343274.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X3 [Apis florea]
Evalue: 7e-150 | Bitscore: 458
Identities = 233/422 (55%), Positives = 297/422 (70%), Gaps = 35/422 (8%) |
NCBI |
Show Blast
|
| XP_006567065.1 |
PREDICTED: dorsal protein isoform X6 [Apis mellifera]
Evalue: 1e-149 | Bitscore: 457
Identities = 233/422 (55%), Positives = 297/422 (70%), Gaps = 35/422 (8%) |
NCBI |
Show Blast
|
| NP_001011577.1 |
AAP23055.1 dorsal protein [Apis mellifera] 602
Evalue: 2e-151 | Bitscore: 456
Identities = 235/429 (55%), Positives = 299/429 (70%), Gaps = 34/429 (8%) |
Insects |
Show Blast
|
| NP_001011577.1 |
AAP23055.1 dorsal protein [Apis mellifera] 602
Evalue: 2e-151 | Bitscore: 456
Identities = 235/429 (55%), Positives = 299/429 (70%), Gaps = 34/429 (8%) |
Insects |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| NP_001011577.1 |
AAP23055.1 dorsal protein [Apis mellifera] 602
Evalue: 2e-151 | Bitscore: 456
Identities = 235/429 (55%), Positives = 299/429 (70%), Gaps = 34/429 (8%) |
Insects |
Show Blast
|
| NP_001011577.1 |
AAP23055.1 dorsal protein [Apis mellifera] 602
Evalue: 2e-151 | Bitscore: 456
Identities = 235/429 (55%), Positives = 299/429 (70%), Gaps = 34/429 (8%) |
Insects |
Show Blast
|
| NP_001011577.1 |
AAP23055.1 dorsal protein [Apis mellifera] 602
Evalue: 2e-151 | Bitscore: 456
Identities = 235/429 (55%), Positives = 299/429 (70%), Gaps = 34/429 (8%) |
Insects |
Show Blast
|
| NP_001011577.1 |
AAP23055.1 dorsal protein [Apis mellifera] 602
Evalue: 2e-151 | Bitscore: 456
Identities = 235/429 (55%), Positives = 299/429 (70%), Gaps = 34/429 (8%) |
Insects |
Show Blast
|
| NP_001034507.1 |
AAG22858.1 Dorsal [Tribolium castaneum] 556
Evalue: 7e-146 | Bitscore: 440
Identities = 202/307 (66%), Positives = 255/307 (83%), Gaps = 1/307 (0%) |
Insects |
Show Blast
|
| NP_001034507.1 |
AAG22858.1 Dorsal [Tribolium castaneum] 556
Evalue: 7e-146 | Bitscore: 440
Identities = 202/307 (66%), Positives = 255/307 (83%), Gaps = 1/307 (0%) |
Insects |
Show Blast
|
| NP_001034507.1 |
AAG22858.1 Dorsal [Tribolium castaneum] 556
Evalue: 7e-146 | Bitscore: 440
Identities = 202/307 (66%), Positives = 255/307 (83%), Gaps = 1/307 (0%) |
Insects |
Show Blast
|
| NP_001034507.1 |
AAG22858.1 Dorsal [Tribolium castaneum] 556
Evalue: 7e-146 | Bitscore: 440
Identities = 202/307 (66%), Positives = 255/307 (83%), Gaps = 1/307 (0%) |
Insects |
Show Blast
|
| AAP23056.1 |
dorsal protein splice variant B [Apis mellifera] 810
Evalue: 1e-140 | Bitscore: 434
Identities = 197/282 (70%), Positives = 237/282 (84%), Gaps = 0/282 (0%) |
Insects |
Show Blast
|
| AAP23056.1 |
dorsal protein splice variant B [Apis mellifera] 810
Evalue: 1e-140 | Bitscore: 434
Identities = 197/282 (70%), Positives = 237/282 (84%), Gaps = 0/282 (0%) |
Insects |
Show Blast
|
| AAP23056.1 |
dorsal protein splice variant B [Apis mellifera] 810
Evalue: 1e-140 | Bitscore: 434
Identities = 197/282 (70%), Positives = 237/282 (84%), Gaps = 0/282 (0%) |
Insects |
Show Blast
|
| AAP23056.1 |
dorsal protein splice variant B [Apis mellifera] 810
Evalue: 1e-140 | Bitscore: 434
Identities = 197/282 (70%), Positives = 237/282 (84%), Gaps = 0/282 (0%) |
Insects |
Show Blast
|
| Dappu0000007961 |
jgi|Dappu1|52849|e_gw1.32.130.1
Evalue: 4e-144 | Bitscore: 426
Identities = 194/279 (70%), Positives = 237/279 (85%), Gaps = 1/279 (0%) |
Insects |
Show Blast
|
| Dappu0000007961 |
jgi|Dappu1|52849|e_gw1.32.130.1
Evalue: 4e-144 | Bitscore: 426
Identities = 194/279 (70%), Positives = 237/279 (85%), Gaps = 1/279 (0%) |
Insects |
Show Blast
|
| Dappu0000007961 |
jgi|Dappu1|52849|e_gw1.32.130.1
Evalue: 4e-144 | Bitscore: 426
Identities = 194/279 (70%), Positives = 237/279 (85%), Gaps = 1/279 (0%) |
Insects |
Show Blast
|
| Dappu0000007961 |
jgi|Dappu1|52849|e_gw1.32.130.1
Evalue: 4e-144 | Bitscore: 426
Identities = 194/279 (70%), Positives = 237/279 (85%), Gaps = 1/279 (0%) |
Insects |
Show Blast
|
| AAT94434.1 |
RE58537p [Drosophila melanogaster] 677
Evalue: 5e-138 | Bitscore: 424
Identities = 198/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| AAT94434.1 |
RE58537p [Drosophila melanogaster] 677
Evalue: 5e-138 | Bitscore: 424
Identities = 198/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| AAT94434.1 |
RE58537p [Drosophila melanogaster] 677
Evalue: 5e-138 | Bitscore: 424
Identities = 198/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| AAT94434.1 |
RE58537p [Drosophila melanogaster] 677
Evalue: 5e-138 | Bitscore: 424
Identities = 198/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| NP_724053.1 |
NP_724052.1 AAF53611.1 AAF53610.1 dorsal, isoform B [Drosophila melanogaster] 677
Evalue: 1e-137 | Bitscore: 422
Identities = 197/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| AAA28479.1 |
dorsal protein 678
Evalue: 1e-137 | Bitscore: 422
Identities = 197/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| NP_724053.1 |
NP_724052.1 AAF53611.1 AAF53610.1 dorsal, isoform B [Drosophila melanogaster] 677
Evalue: 1e-137 | Bitscore: 422
Identities = 197/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| AAA28479.1 |
dorsal protein 678
Evalue: 1e-137 | Bitscore: 422
Identities = 197/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| NP_724053.1 |
NP_724052.1 AAF53611.1 AAF53610.1 dorsal, isoform B [Drosophila melanogaster] 677
Evalue: 1e-137 | Bitscore: 422
Identities = 197/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| AAA28479.1 |
dorsal protein 678
Evalue: 1e-137 | Bitscore: 422
Identities = 197/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| NP_724053.1 |
NP_724052.1 AAF53611.1 AAF53610.1 dorsal, isoform B [Drosophila melanogaster] 677
Evalue: 1e-137 | Bitscore: 422
Identities = 197/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| AAA28479.1 |
dorsal protein 678
Evalue: 1e-137 | Bitscore: 422
Identities = 197/295 (67%), Positives = 237/295 (80%), Gaps = 0/295 (0%) |
Insects |
Show Blast
|
| 16872 |
AAEL007696-RA.1
Evalue: 3e-135 | Bitscore: 413
Identities = 192/294 (65%), Positives = 233/294 (79%), Gaps = 4/294 (1%) |
Insects |
Show Blast
|
| 16872 |
AAEL007696-RA.1
Evalue: 3e-135 | Bitscore: 413
Identities = 192/294 (65%), Positives = 233/294 (79%), Gaps = 4/294 (1%) |
Insects |
Show Blast
|
| 16872 |
AAEL007696-RA.1
Evalue: 3e-135 | Bitscore: 413
Identities = 192/294 (65%), Positives = 233/294 (79%), Gaps = 4/294 (1%) |
Insects |
Show Blast
|
| 16872 |
AAEL007696-RA.1
Evalue: 3e-135 | Bitscore: 413
Identities = 192/294 (65%), Positives = 233/294 (79%), Gaps = 4/294 (1%) |
Insects |
Show Blast
|
| AAC35296.1 |
dorsal B [Drosophila melanogaster] 994
Evalue: 2e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
Insects |
Show Blast
|
| NP_724054.1 |
AAF53612.1 DORS_DROME RecName: Full=Embryonic polarity protein dorsal 999
Evalue: 2e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
Insects |
Show Blast
|
| AAC35296.1 |
dorsal B [Drosophila melanogaster] 994
Evalue: 2e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
Insects |
Show Blast
|
| NP_724054.1 |
AAF53612.1 DORS_DROME RecName: Full=Embryonic polarity protein dorsal 999
Evalue: 2e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
Insects |
Show Blast
|
| AAC35296.1 |
dorsal B [Drosophila melanogaster] 994
Evalue: 2e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
Insects |
Show Blast
|
| NP_724054.1 |
AAF53612.1 DORS_DROME RecName: Full=Embryonic polarity protein dorsal 999
Evalue: 2e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
Insects |
Show Blast
|
| AAC35296.1 |
dorsal B [Drosophila melanogaster] 994
Evalue: 2e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
Insects |
Show Blast
|
| NP_724054.1 |
AAF53612.1 DORS_DROME RecName: Full=Embryonic polarity protein dorsal 999
Evalue: 2e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
Insects |
Show Blast
|
| No hits found against database Ixodes with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_015786990.1 |
PREDICTED: putative transcription factor p65 homolog [Tetranychus urticae]
Evalue: 0.0 | Bitscore: 1145
Identities = 624/624 (100%), Positives = 624/624 (100%), Gaps = 0/624 (0%) |
NCBI |
Show Blast
|
| XP_013777220.1 |
PREDICTED: embryonic polarity protein dorsal-like [Limulus polyphemus]
Evalue: 1e-160 | Bitscore: 486
Identities = 222/309 (72%), Positives = 269/309 (87%), Gaps = 2/309 (1%) |
NCBI |
Show Blast
|
| XP_013777220.1 |
PREDICTED: embryonic polarity protein dorsal-like [Limulus polyphemus]
Evalue: 1e-160 | Bitscore: 486
Identities = 222/309 (72%), Positives = 269/309 (87%), Gaps = 2/309 (1%) |
NCBI |
Show Blast
|
| XP_013777220.1 |
PREDICTED: embryonic polarity protein dorsal-like [Limulus polyphemus]
Evalue: 1e-160 | Bitscore: 486
Identities = 222/309 (72%), Positives = 269/309 (87%), Gaps = 2/309 (1%) |
NCBI |
Show Blast
|
| XP_013777220.1 |
PREDICTED: embryonic polarity protein dorsal-like [Limulus polyphemus]
Evalue: 1e-160 | Bitscore: 486
Identities = 222/309 (72%), Positives = 269/309 (87%), Gaps = 2/309 (1%) |
NCBI |
Show Blast
|
| AAZ40333.1 |
NFkB [Carcinoscorpius rotundicauda]
Evalue: 1e-158 | Bitscore: 479
Identities = 224/323 (69%), Positives = 271/323 (84%), Gaps = 7/323 (2%) |
NCBI |
Show Blast
|
| AAZ40333.1 |
NFkB [Carcinoscorpius rotundicauda]
Evalue: 1e-158 | Bitscore: 479
Identities = 224/323 (69%), Positives = 271/323 (84%), Gaps = 7/323 (2%) |
NCBI |
Show Blast
|
| AAZ40333.1 |
NFkB [Carcinoscorpius rotundicauda]
Evalue: 1e-158 | Bitscore: 479
Identities = 224/323 (69%), Positives = 271/323 (84%), Gaps = 7/323 (2%) |
NCBI |
Show Blast
|
| AAZ40333.1 |
NFkB [Carcinoscorpius rotundicauda]
Evalue: 1e-158 | Bitscore: 479
Identities = 224/323 (69%), Positives = 271/323 (84%), Gaps = 7/323 (2%) |
NCBI |
Show Blast
|
| KPM10359.1 |
embryonic polarity protein dorsal-like protein [Sarcoptes scabiei]
Evalue: 7e-158 | Bitscore: 479
Identities = 220/295 (75%), Positives = 254/295 (86%), Gaps = 1/295 (0%) |
NCBI |
Show Blast
|
| KPM10359.1 |
embryonic polarity protein dorsal-like protein [Sarcoptes scabiei]
Evalue: 7e-158 | Bitscore: 479
Identities = 220/295 (75%), Positives = 254/295 (86%), Gaps = 1/295 (0%) |
NCBI |
Show Blast
|
| KPM10359.1 |
embryonic polarity protein dorsal-like protein [Sarcoptes scabiei]
Evalue: 8e-158 | Bitscore: 479
Identities = 220/295 (75%), Positives = 254/295 (86%), Gaps = 1/295 (0%) |
NCBI |
Show Blast
|
| KPM10359.1 |
embryonic polarity protein dorsal-like protein [Sarcoptes scabiei]
Evalue: 8e-158 | Bitscore: 479
Identities = 220/295 (75%), Positives = 254/295 (86%), Gaps = 1/295 (0%) |
NCBI |
Show Blast
|
| XP_006619742.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X5 [Apis dorsata]
Evalue: 8e-151 | Bitscore: 460
Identities = 237/425 (56%), Positives = 298/425 (70%), Gaps = 41/425 (10%) |
NCBI |
Show Blast
|
| XP_006619742.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X5 [Apis dorsata]
Evalue: 8e-151 | Bitscore: 460
Identities = 237/425 (56%), Positives = 298/425 (70%), Gaps = 41/425 (10%) |
NCBI |
Show Blast
|
| XP_006619742.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X5 [Apis dorsata]
Evalue: 9e-151 | Bitscore: 460
Identities = 237/425 (56%), Positives = 298/425 (70%), Gaps = 41/425 (10%) |
NCBI |
Show Blast
|
| XP_006619742.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X5 [Apis dorsata]
Evalue: 9e-151 | Bitscore: 460
Identities = 237/425 (56%), Positives = 298/425 (70%), Gaps = 41/425 (10%) |
NCBI |
Show Blast
|
| XP_012343274.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X3 [Apis florea]
Evalue: 6e-150 | Bitscore: 458
Identities = 233/422 (55%), Positives = 297/422 (70%), Gaps = 35/422 (8%) |
NCBI |
Show Blast
|
| XP_012343274.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X3 [Apis florea]
Evalue: 7e-150 | Bitscore: 458
Identities = 233/422 (55%), Positives = 297/422 (70%), Gaps = 35/422 (8%) |
NCBI |
Show Blast
|
| XP_012343274.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X3 [Apis florea]
Evalue: 7e-150 | Bitscore: 458
Identities = 233/422 (55%), Positives = 297/422 (70%), Gaps = 35/422 (8%) |
NCBI |
Show Blast
|
| XP_012343274.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X3 [Apis florea]
Evalue: 7e-150 | Bitscore: 458
Identities = 233/422 (55%), Positives = 297/422 (70%), Gaps = 35/422 (8%) |
NCBI |
Show Blast
|
| XP_006619741.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X4 [Apis dorsata]
Evalue: 9e-150 | Bitscore: 458
Identities = 238/432 (55%), Positives = 301/432 (70%), Gaps = 40/432 (9%) |
NCBI |
Show Blast
|
| XP_006619741.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X4 [Apis dorsata]
Evalue: 1e-149 | Bitscore: 458
Identities = 238/432 (55%), Positives = 301/432 (70%), Gaps = 40/432 (9%) |
NCBI |
Show Blast
|
| XP_006619741.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X4 [Apis dorsata]
Evalue: 1e-149 | Bitscore: 458
Identities = 238/432 (55%), Positives = 301/432 (70%), Gaps = 40/432 (9%) |
NCBI |
Show Blast
|
| XP_006619741.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X4 [Apis dorsata]
Evalue: 1e-149 | Bitscore: 458
Identities = 238/432 (55%), Positives = 301/432 (70%), Gaps = 40/432 (9%) |
NCBI |
Show Blast
|
| XP_006567065.1 |
PREDICTED: dorsal protein isoform X6 [Apis mellifera]
Evalue: 1e-149 | Bitscore: 457
Identities = 233/422 (55%), Positives = 297/422 (70%), Gaps = 35/422 (8%) |
NCBI |
Show Blast
|
| XP_006567065.1 |
PREDICTED: dorsal protein isoform X6 [Apis mellifera]
Evalue: 1e-149 | Bitscore: 457
Identities = 233/422 (55%), Positives = 297/422 (70%), Gaps = 35/422 (8%) |
NCBI |
Show Blast
|
| XP_006567065.1 |
PREDICTED: dorsal protein isoform X6 [Apis mellifera]
Evalue: 1e-149 | Bitscore: 457
Identities = 233/422 (55%), Positives = 297/422 (70%), Gaps = 35/422 (8%) |
NCBI |
Show Blast
|
| XP_006567065.1 |
PREDICTED: dorsal protein isoform X6 [Apis mellifera]
Evalue: 1e-149 | Bitscore: 457
Identities = 233/422 (55%), Positives = 297/422 (70%), Gaps = 35/422 (8%) |
NCBI |
Show Blast
|
| XP_012283784.1 |
PREDICTED: proto-oncogene c-Rel isoform X2 [Orussus abietinus]
Evalue: 2e-149 | Bitscore: 456
Identities = 212/299 (71%), Positives = 248/299 (83%), Gaps = 1/299 (0%) |
NCBI |
Show Blast
|
| XP_012283784.1 |
PREDICTED: proto-oncogene c-Rel isoform X2 [Orussus abietinus]
Evalue: 3e-149 | Bitscore: 456
Identities = 212/299 (71%), Positives = 248/299 (83%), Gaps = 1/299 (0%) |
NCBI |
Show Blast
|
| XP_012283784.1 |
PREDICTED: proto-oncogene c-Rel isoform X2 [Orussus abietinus]
Evalue: 3e-149 | Bitscore: 456
Identities = 212/299 (71%), Positives = 248/299 (83%), Gaps = 1/299 (0%) |
NCBI |
Show Blast
|
| XP_012283784.1 |
PREDICTED: proto-oncogene c-Rel isoform X2 [Orussus abietinus]
Evalue: 3e-149 | Bitscore: 456
Identities = 212/299 (71%), Positives = 248/299 (83%), Gaps = 1/299 (0%) |
NCBI |
Show Blast
|
| XP_012343273.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X2 [Apis florea]
Evalue: 8e-149 | Bitscore: 456
Identities = 234/429 (55%), Positives = 300/429 (70%), Gaps = 34/429 (8%) |
NCBI |
Show Blast
|
| XP_012343273.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X2 [Apis florea]
Evalue: 8e-149 | Bitscore: 456
Identities = 234/429 (55%), Positives = 300/429 (70%), Gaps = 34/429 (8%) |
NCBI |
Show Blast
|
| XP_012343273.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X2 [Apis florea]
Evalue: 9e-149 | Bitscore: 456
Identities = 234/429 (55%), Positives = 300/429 (70%), Gaps = 34/429 (8%) |
NCBI |
Show Blast
|
| XP_012343273.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X2 [Apis florea]
Evalue: 9e-149 | Bitscore: 456
Identities = 234/429 (55%), Positives = 300/429 (70%), Gaps = 34/429 (8%) |
NCBI |
Show Blast
|
| XP_013790474.1 |
PREDICTED: putative transcription factor p65 homolog [Limulus polyphemus]
Evalue: 9e-149 | Bitscore: 455
Identities = 222/348 (64%), Positives = 278/348 (80%), Gaps = 2/348 (1%) |
NCBI |
Show Blast
|
| XP_013790474.1 |
PREDICTED: putative transcription factor p65 homolog [Limulus polyphemus]
Evalue: 9e-149 | Bitscore: 455
Identities = 222/348 (64%), Positives = 278/348 (80%), Gaps = 2/348 (1%) |
NCBI |
Show Blast
|
| XP_006619742.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X5 [Apis dorsata]
Evalue: 1e-119 | Bitscore: 438
Identities = 222/359 (61%), Positives = 268/359 (74%), Gaps = 14/359 (3%) |
NCBI |
Show Blast
|
| XP_012283783.1 |
PREDICTED: proto-oncogene c-Rel isoform X1 [Orussus abietinus]
Evalue: 1e-119 | Bitscore: 437
Identities = 212/299 (70%), Positives = 248/299 (82%), Gaps = 1/299 (0%) |
NCBI |
Show Blast
|
| XP_012283784.1 |
PREDICTED: proto-oncogene c-Rel isoform X2 [Orussus abietinus]
Evalue: 1e-119 | Bitscore: 437
Identities = 212/299 (70%), Positives = 248/299 (82%), Gaps = 1/299 (0%) |
NCBI |
Show Blast
|
| XP_015430648.1 |
PREDICTED: putative transcription factor p65 homolog [Dufourea novaeangliae]
Evalue: 1e-118 | Bitscore: 434
Identities = 207/299 (69%), Positives = 248/299 (82%), Gaps = 1/299 (0%) |
NCBI |
Show Blast
|
| XP_003708412.1 |
PREDICTED: putative transcription factor p65 homolog isoform X3 [Megachile rotundata]
Evalue: 1e-118 | Bitscore: 433
Identities = 205/299 (68%), Positives = 247/299 (82%), Gaps = 1/299 (0%) |
NCBI |
Show Blast
|
| XP_006619741.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X4 [Apis dorsata]
Evalue: 1e-118 | Bitscore: 433
Identities = 208/299 (69%), Positives = 248/299 (82%), Gaps = 1/299 (0%) |
NCBI |
Show Blast
|
| XP_014250203.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X1 [Cimex lectularius]
Evalue: 1e-117 | Bitscore: 432
Identities = 208/306 (67%), Positives = 243/306 (79%) |
NCBI |
Show Blast
|
| XP_014250206.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X4 [Cimex lectularius]
Evalue: 1e-117 | Bitscore: 432
Identities = 208/306 (67%), Positives = 243/306 (79%) |
NCBI |
Show Blast
|
| XP_014250204.1 |
PREDICTED: embryonic polarity protein dorsal-like isoform X2 [Cimex lectularius]
Evalue: 1e-117 | Bitscore: 432
Identities = 208/306 (67%), Positives = 243/306 (79%) |
NCBI |
Show Blast
|
| KDR23857.1 |
Embryonic polarity protein dorsal [Zootermopsis nevadensis]
Evalue: 1e-117 | Bitscore: 431
Identities = 204/278 (73%), Positives = 236/278 (84%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| tetur07g00650 |
length:666 (mRNA) (Rel) (relish) (Rel) (protein binding)
Evalue: 1e-51 | Bitscore: 189
Identities = 114/322 (35%), Positives = 176/322 (55%), Gaps = 26/322 (8%) |
Self |
Show Blast
|
| tetur07g00650 |
length:666 (mRNA) (Rel) (relish) (Rel) (protein binding)
Evalue: 1e-51 | Bitscore: 189
Identities = 114/322 (35%), Positives = 176/322 (55%), Gaps = 26/322 (8%) |
Self |
Show Blast
|
| tetur07g00650 |
length:666 (mRNA) (Rel) (relish) (Rel) (protein binding)
Evalue: 1e-51 | Bitscore: 189
Identities = 114/322 (35%), Positives = 176/322 (55%), Gaps = 26/322 (8%) |
Self |
Show Blast
|
| tetur07g00650 |
length:666 (mRNA) (Rel) (relish) (Rel) (protein binding)
Evalue: 1e-51 | Bitscore: 189
Identities = 114/322 (35%), Positives = 176/322 (55%), Gaps = 26/322 (8%) |
Self |
Show Blast
|
| tetur07g00650 |
length:666 (mRNA) (Rel) (relish) (Rel) (protein binding)
Evalue: 1e-51 | Bitscore: 189
Identities = 114/322 (35%), Positives = 176/322 (55%), Gaps = 26/322 (8%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| P15330 |
Embryonic polarity protein dorsal OS=Drosophila melanogaster GN=dl PE=1 SV=2
Evalue: 7e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
SwissP |
Show Blast
|
| P15330 |
Embryonic polarity protein dorsal OS=Drosophila melanogaster GN=dl PE=1 SV=2
Evalue: 7e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
SwissP |
Show Blast
|
| P15330 |
Embryonic polarity protein dorsal OS=Drosophila melanogaster GN=dl PE=1 SV=2
Evalue: 7e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
SwissP |
Show Blast
|
| P15330 |
Embryonic polarity protein dorsal OS=Drosophila melanogaster GN=dl PE=1 SV=2
Evalue: 7e-130 | Bitscore: 412
Identities = 189/280 (68%), Positives = 229/280 (82%), Gaps = 0/280 (0%) |
SwissP |
Show Blast
|
| P16236 |
Proto-oncogene c-Rel OS=Gallus gallus GN=REL PE=1 SV=2
Evalue: 7e-83 | Bitscore: 278
Identities = 141/296 (48%), Positives = 194/296 (66%), Gaps = 10/296 (3%) |
SwissP |
Show Blast
|
| P16236 |
Proto-oncogene c-Rel OS=Gallus gallus GN=REL PE=1 SV=2
Evalue: 7e-83 | Bitscore: 278
Identities = 141/296 (48%), Positives = 194/296 (66%), Gaps = 10/296 (3%) |
SwissP |
Show Blast
|
| P16236 |
Proto-oncogene c-Rel OS=Gallus gallus GN=REL PE=1 SV=2
Evalue: 7e-83 | Bitscore: 278
Identities = 141/296 (48%), Positives = 194/296 (66%), Gaps = 10/296 (3%) |
SwissP |
Show Blast
|
| P16236 |
Proto-oncogene c-Rel OS=Gallus gallus GN=REL PE=1 SV=2
Evalue: 7e-83 | Bitscore: 278
Identities = 141/296 (48%), Positives = 194/296 (66%), Gaps = 10/296 (3%) |
SwissP |
Show Blast
|
| P98149 |
Dorsal-related immunity factor Dif OS=Drosophila melanogaster GN=Dif PE=2 SV=2
Evalue: 2e-82 | Bitscore: 278
Identities = 145/319 (45%), Positives = 207/319 (65%), Gaps = 17/319 (5%) |
SwissP |
Show Blast
|
| P98149 |
Dorsal-related immunity factor Dif OS=Drosophila melanogaster GN=Dif PE=2 SV=2
Evalue: 2e-82 | Bitscore: 278
Identities = 145/319 (45%), Positives = 207/319 (65%), Gaps = 17/319 (5%) |
SwissP |
Show Blast
|
| P98149 |
Dorsal-related immunity factor Dif OS=Drosophila melanogaster GN=Dif PE=2 SV=2
Evalue: 2e-82 | Bitscore: 278
Identities = 145/319 (45%), Positives = 207/319 (65%), Gaps = 17/319 (5%) |
SwissP |
Show Blast
|
| P98149 |
Dorsal-related immunity factor Dif OS=Drosophila melanogaster GN=Dif PE=2 SV=2
Evalue: 2e-82 | Bitscore: 278
Identities = 145/319 (45%), Positives = 207/319 (65%), Gaps = 17/319 (5%) |
SwissP |
Show Blast
|
| P01126 |
Transforming protein rel polyprotein OS=Avian reticuloendotheliosis virus GN=V-REL PE=4 SV=1
Evalue: 1e-82 | Bitscore: 275
Identities = 143/303 (47%), Positives = 194/303 (64%), Gaps = 10/303 (3%) |
SwissP |
Show Blast
|
| P01126 |
Transforming protein rel polyprotein OS=Avian reticuloendotheliosis virus GN=V-REL PE=4 SV=1
Evalue: 1e-82 | Bitscore: 275
Identities = 143/303 (47%), Positives = 194/303 (64%), Gaps = 10/303 (3%) |
SwissP |
Show Blast
|
| P01126 |
Transforming protein rel polyprotein OS=Avian reticuloendotheliosis virus GN=V-REL PE=4 SV=1
Evalue: 1e-82 | Bitscore: 275
Identities = 143/303 (47%), Positives = 194/303 (64%), Gaps = 10/303 (3%) |
SwissP |
Show Blast
|
| P01126 |
Transforming protein rel polyprotein OS=Avian reticuloendotheliosis virus GN=V-REL PE=4 SV=1
Evalue: 1e-82 | Bitscore: 275
Identities = 143/303 (47%), Positives = 194/303 (64%), Gaps = 10/303 (3%) |
SwissP |
Show Blast
|
| P01125 |
Proto-oncogene c-Rel (Fragment) OS=Meleagris gallopavo GN=REL PE=3 SV=3
Evalue: 6e-81 | Bitscore: 271
Identities = 141/296 (48%), Positives = 191/296 (65%), Gaps = 10/296 (3%) |
SwissP |
Show Blast
|
| P01125 |
Proto-oncogene c-Rel (Fragment) OS=Meleagris gallopavo GN=REL PE=3 SV=3
Evalue: 6e-81 | Bitscore: 271
Identities = 141/296 (48%), Positives = 191/296 (65%), Gaps = 10/296 (3%) |
SwissP |
Show Blast
|
| P01125 |
Proto-oncogene c-Rel (Fragment) OS=Meleagris gallopavo GN=REL PE=3 SV=3
Evalue: 6e-81 | Bitscore: 271
Identities = 141/296 (48%), Positives = 191/296 (65%), Gaps = 10/296 (3%) |
SwissP |
Show Blast
|
| P01125 |
Proto-oncogene c-Rel (Fragment) OS=Meleagris gallopavo GN=REL PE=3 SV=3
Evalue: 6e-81 | Bitscore: 271
Identities = 141/296 (48%), Positives = 191/296 (65%), Gaps = 10/296 (3%) |
SwissP |
Show Blast
|
| Q04864 |
Proto-oncogene c-Rel OS=Homo sapiens GN=REL PE=1 SV=1
Evalue: 2e-76 | Bitscore: 261
Identities = 138/297 (46%), Positives = 186/297 (63%), Gaps = 10/297 (3%) |
SwissP |
Show Blast
|
| Q04864 |
Proto-oncogene c-Rel OS=Homo sapiens GN=REL PE=1 SV=1
Evalue: 2e-76 | Bitscore: 261
Identities = 138/297 (46%), Positives = 186/297 (63%), Gaps = 10/297 (3%) |
SwissP |
Show Blast
|
| Q04864 |
Proto-oncogene c-Rel OS=Homo sapiens GN=REL PE=1 SV=1
Evalue: 2e-76 | Bitscore: 261
Identities = 138/297 (46%), Positives = 186/297 (63%), Gaps = 10/297 (3%) |
SwissP |
Show Blast
|
| Q04864 |
Proto-oncogene c-Rel OS=Homo sapiens GN=REL PE=1 SV=1
Evalue: 2e-76 | Bitscore: 261
Identities = 138/297 (46%), Positives = 186/297 (63%), Gaps = 10/297 (3%) |
SwissP |
Show Blast
|
| Q04206 |
Transcription factor p65 OS=Homo sapiens GN=RELA PE=1 SV=2
Evalue: 1e-76 | Bitscore: 260
Identities = 138/301 (46%), Positives = 186/301 (62%), Gaps = 12/301 (4%) |
SwissP |
Show Blast
|
| Q04206 |
Transcription factor p65 OS=Homo sapiens GN=RELA PE=1 SV=2
Evalue: 1e-76 | Bitscore: 260
Identities = 138/301 (46%), Positives = 186/301 (62%), Gaps = 12/301 (4%) |
SwissP |
Show Blast
|
| Q04206 |
Transcription factor p65 OS=Homo sapiens GN=RELA PE=1 SV=2
Evalue: 1e-76 | Bitscore: 260
Identities = 138/301 (46%), Positives = 186/301 (62%), Gaps = 12/301 (4%) |
SwissP |
Show Blast
|
| Q04206 |
Transcription factor p65 OS=Homo sapiens GN=RELA PE=1 SV=2
Evalue: 1e-76 | Bitscore: 260
Identities = 138/301 (46%), Positives = 186/301 (62%), Gaps = 12/301 (4%) |
SwissP |
Show Blast
|
| Q04207 |
Transcription factor p65 OS=Mus musculus GN=Rela PE=1 SV=1
Evalue: 2e-76 | Bitscore: 259
Identities = 140/303 (46%), Positives = 187/303 (62%), Gaps = 16/303 (5%) |
SwissP |
Show Blast
|
| Q04207 |
Transcription factor p65 OS=Mus musculus GN=Rela PE=1 SV=1
Evalue: 2e-76 | Bitscore: 259
Identities = 140/303 (46%), Positives = 187/303 (62%), Gaps = 16/303 (5%) |
SwissP |
Show Blast
|
| Q04207 |
Transcription factor p65 OS=Mus musculus GN=Rela PE=1 SV=1
Evalue: 2e-76 | Bitscore: 259
Identities = 140/303 (46%), Positives = 187/303 (62%), Gaps = 16/303 (5%) |
SwissP |
Show Blast
|
| Q04207 |
Transcription factor p65 OS=Mus musculus GN=Rela PE=1 SV=1
Evalue: 2e-76 | Bitscore: 259
Identities = 140/303 (46%), Positives = 187/303 (62%), Gaps = 16/303 (5%) |
SwissP |
Show Blast
|
| Q04865 |
Putative transcription factor p65 homolog OS=Xenopus laevis GN=rela PE=2 SV=1
Evalue: 3e-76 | Bitscore: 258
Identities = 140/310 (45%), Positives = 196/310 (63%), Gaps = 13/310 (4%) |
SwissP |
Show Blast
|
| Q04865 |
Putative transcription factor p65 homolog OS=Xenopus laevis GN=rela PE=2 SV=1
Evalue: 3e-76 | Bitscore: 258
Identities = 140/310 (45%), Positives = 196/310 (63%), Gaps = 13/310 (4%) |
SwissP |
Show Blast
|
| Q04865 |
Putative transcription factor p65 homolog OS=Xenopus laevis GN=rela PE=2 SV=1
Evalue: 3e-76 | Bitscore: 258
Identities = 140/310 (45%), Positives = 196/310 (63%), Gaps = 13/310 (4%) |
SwissP |
Show Blast
|
| Q04865 |
Putative transcription factor p65 homolog OS=Xenopus laevis GN=rela PE=2 SV=1
Evalue: 3e-76 | Bitscore: 258
Identities = 140/310 (45%), Positives = 196/310 (63%), Gaps = 13/310 (4%) |
SwissP |
Show Blast
|
| Q6F3J0 |
Nuclear factor NF-kappa-B p105 subunit OS=Canis familiaris GN=NFKB1 PE=2 SV=2
Evalue: 3e-72 | Bitscore: 256
Identities = 140/328 (43%), Positives = 191/328 (58%), Gaps = 34/328 (10%) |
SwissP |
Show Blast
|
| Q6F3J0 |
Nuclear factor NF-kappa-B p105 subunit OS=Canis familiaris GN=NFKB1 PE=2 SV=2
Evalue: 3e-72 | Bitscore: 256
Identities = 140/328 (43%), Positives = 191/328 (58%), Gaps = 34/328 (10%) |
SwissP |
Show Blast
|
| Q6F3J0 |
Nuclear factor NF-kappa-B p105 subunit OS=Canis familiaris GN=NFKB1 PE=2 SV=2
Evalue: 3e-72 | Bitscore: 256
Identities = 140/328 (43%), Positives = 191/328 (58%), Gaps = 34/328 (10%) |
SwissP |
Show Blast
|
| Q6F3J0 |
Nuclear factor NF-kappa-B p105 subunit OS=Canis familiaris GN=NFKB1 PE=2 SV=2
Evalue: 3e-72 | Bitscore: 256
Identities = 140/328 (43%), Positives = 191/328 (58%), Gaps = 34/328 (10%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | CCIN2920.b1 |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 1846027..1846301,1847899..1848401 |
Strand + |
| EST ID | CCIN2920.g1 |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 1846116..1846301,1847899..1848466 |
Strand + |
| EST ID | CCZA6738.b1 |
Support Model | Y |
More Info |
| Mapping Location | 1849577..1850311 |
Strand + |
| EST ID | CCZA6738.g1 |
Support Model | Y |
More Info |
| Comment | EST is mapped on the opposite strand of the predicted model |
| Mapping Location | 1849847..1850592 |
Strand - |
| EST ID | CCZB15699.b1 |
Support Model | Y |
More Info |
| Mapping Location | 1848913..1849706 |
Strand + |
| EST ID | CCZB15699.g1 |
Support Model | Y |
More Info |
| Comment | EST is mapped on the opposite strand of the predicted model |
| Mapping Location | 1849852..1850576 |
Strand - |
| EST ID | JUNC00009012.adu |
Support Model | Y |
More Info |
| Mapping Location | 1848334..1848400,1848526..1848580 |
Strand + |
| EST ID | JUNC00009013.adu |
Support Model | Y |
More Info |
| Mapping Location | 1848610..1848669,1848802..1848871 |
Strand + |
| EST ID | JUNC00011012.bea |
Support Model | Y |
More Info |
| Mapping Location | 1848335..1848400,1848526..1848595 |
Strand + |
| EST ID | JUNC00011013.bea |
Support Model | Y |
More Info |
| Mapping Location | 1848606..1848669,1848802..1848866 |
Strand + |
| EST ID | JUNC00012227.lar |
Support Model | Y |
More Info |
| Mapping Location | 1848339..1848400,1848526..1848596 |
Strand + |
| EST ID | JUNC00012228.lar |
Support Model | Y |
More Info |
| Mapping Location | 1848605..1848669,1848802..1848866 |
Strand + |
| EST ID | JUNC00012539.nym |
Support Model | N |
More Info |
| Comment | EST is inconsistent with the given gene model. |
| Mapping Location | 1848191..1848244,1848309..1848329 |
Strand + |
| EST ID | JUNC00012540.nym |
Support Model | Y |
More Info |
| Mapping Location | 1848335..1848400,1848526..1848596 |
Strand + |
| EST ID | JUNC00012541.nym |
Support Model | Y |
More Info |
| Mapping Location | 1848606..1848669,1848802..1848864 |
Strand + |
| EST ID | JUNC00013299.emb |
Support Model | N |
More Info |
| Comment | EST has one or more non canonical splice site(s) |
| Mapping Location | 1848376..1848400,1848426..1848475 |
Strand + |
| EST ID | JUNC00013300.emb |
Support Model | Y |
More Info |
| Mapping Location | 1848332..1848400,1848526..1848596 |
Strand + |
| EST ID | JUNC00013301.emb |
Support Model | Y |
More Info |
| Mapping Location | 1848606..1848669,1848802..1848869 |
Strand + |
| EST ID | JUNC00014466.ara |
Support Model | Y |
More Info |
| Mapping Location | 1848332..1848400,1848526..1848590 |
Strand + |
| EST ID | JUNC00014467.ara |
Support Model | Y |
More Info |
| Mapping Location | 1848599..1848669,1848802..1848869 |
Strand + |
| EST ID | Tetur11g05190 |
Support Model | Y |
More Info |
| Mapping Location | 1847974..1848400,1848526..1848669,1848802..1850105 |
Strand + |
| EST ID | CCIN2920.b1 |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 1846027..1846301,1847899..1848401 |
Strand + |
| EST ID | CCIN2920.g1 |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 1846116..1846301,1847899..1848466 |
Strand + |
| EST ID | CCZA6738.b1 |
Support Model | Y |
More Info |
| Mapping Location | 1849577..1850311 |
Strand + |
| EST ID | CCZA6738.g1 |
Support Model | Y |
More Info |
| Comment | EST is mapped on the opposite strand of the predicted model |
| Mapping Location | 1849847..1850592 |
Strand - |
| EST ID | CCZB15699.b1 |
Support Model | Y |
More Info |
| Mapping Location | 1848913..1849706 |
Strand + |
| EST ID | CCZB15699.g1 |
Support Model | Y |
More Info |
| Comment | EST is mapped on the opposite strand of the predicted model |
| Mapping Location | 1849852..1850576 |
Strand - |
| EST ID | JUNC00009012.adu |
Support Model | Y |
More Info |
| Mapping Location | 1848334..1848400,1848526..1848580 |
Strand + |
| EST ID | JUNC00009013.adu |
Support Model | Y |
More Info |
| Mapping Location | 1848610..1848669,1848802..1848871 |
Strand + |
| EST ID | JUNC00011012.bea |
Support Model | Y |
More Info |
| Mapping Location | 1848335..1848400,1848526..1848595 |
Strand + |
| EST ID | JUNC00011013.bea |
Support Model | Y |
More Info |
| Mapping Location | 1848606..1848669,1848802..1848866 |
Strand + |
| EST ID | JUNC00012227.lar |
Support Model | Y |
More Info |
| Mapping Location | 1848339..1848400,1848526..1848596 |
Strand + |
| EST ID | JUNC00012228.lar |
Support Model | Y |
More Info |
| Mapping Location | 1848605..1848669,1848802..1848866 |
Strand + |
| EST ID | JUNC00012539.nym |
Support Model | N |
More Info |
| Comment | EST is inconsistent with the given gene model. |
| Mapping Location | 1848191..1848244,1848309..1848329 |
Strand + |
| EST ID | JUNC00012540.nym |
Support Model | Y |
More Info |
| Mapping Location | 1848335..1848400,1848526..1848596 |
Strand + |
| EST ID | JUNC00012541.nym |
Support Model | Y |
More Info |
| Mapping Location | 1848606..1848669,1848802..1848864 |
Strand + |
| EST ID | JUNC00013299.emb |
Support Model | N |
More Info |
| Comment | EST has one or more non canonical splice site(s) |
| Mapping Location | 1848376..1848400,1848426..1848475 |
Strand + |
| EST ID | JUNC00013300.emb |
Support Model | Y |
More Info |
| Mapping Location | 1848332..1848400,1848526..1848596 |
Strand + |
| EST ID | JUNC00013301.emb |
Support Model | Y |
More Info |
| Mapping Location | 1848606..1848669,1848802..1848869 |
Strand + |
| EST ID | JUNC00014466.ara |
Support Model | Y |
More Info |
| Mapping Location | 1848332..1848400,1848526..1848590 |
Strand + |
| EST ID | JUNC00014467.ara |
Support Model | Y |
More Info |
| Mapping Location | 1848599..1848669,1848802..1848869 |
Strand + |
| EST ID | Tetur11g05190 |
Support Model | Y |
More Info |
| Mapping Location | 1847974..1848400,1848526..1848669,1848802..1850105 |
Strand + |
| EST ID | CCIN2920.b1 |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 1846027..1846301,1847899..1848401 |
Strand + |
| EST ID | CCIN2920.g1 |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 1846116..1846301,1847899..1848466 |
Strand + |
| EST ID | CCZA6738.b1 |
Support Model | Y |
More Info |
| Mapping Location | 1849577..1850311 |
Strand + |
| EST ID | CCZA6738.g1 |
Support Model | Y |
More Info |
| Comment | EST is mapped on the opposite strand of the predicted model |
| Mapping Location | 1849847..1850592 |
Strand - |
| EST ID | CCZB15699.b1 |
Support Model | Y |
More Info |
| Mapping Location | 1848913..1849706 |
Strand + |
| EST ID | CCZB15699.g1 |
Support Model | Y |
More Info |
| Comment | EST is mapped on the opposite strand of the predicted model |
| Mapping Location | 1849852..1850576 |
Strand - |
| EST ID | JUNC00009012.adu |
Support Model | Y |
More Info |
| Mapping Location | 1848334..1848400,1848526..1848580 |
Strand + |
| EST ID | JUNC00009013.adu |
Support Model | Y |
More Info |
| Mapping Location | 1848610..1848669,1848802..1848871 |
Strand + |
| EST ID | JUNC00011012.bea |
Support Model | Y |
More Info |
| Mapping Location | 1848335..1848400,1848526..1848595 |
Strand + |
| EST ID | JUNC00011013.bea |
Support Model | Y |
More Info |
| Mapping Location | 1848606..1848669,1848802..1848866 |
Strand + |
| EST ID | JUNC00012227.lar |
Support Model | Y |
More Info |
| Mapping Location | 1848339..1848400,1848526..1848596 |
Strand + |
| EST ID | JUNC00012228.lar |
Support Model | Y |
More Info |
| Mapping Location | 1848605..1848669,1848802..1848866 |
Strand + |
| EST ID | JUNC00012539.nym |
Support Model | N |
More Info |
| Comment | EST is inconsistent with the given gene model. |
| Mapping Location | 1848191..1848244,1848309..1848329 |
Strand + |
| EST ID | JUNC00012540.nym |
Support Model | Y |
More Info |
| Mapping Location | 1848335..1848400,1848526..1848596 |
Strand + |
| EST ID | JUNC00012541.nym |
Support Model | Y |
More Info |
| Mapping Location | 1848606..1848669,1848802..1848864 |
Strand + |
| EST ID | JUNC00013299.emb |
Support Model | N |
More Info |
| Comment | EST has one or more non canonical splice site(s) |
| Mapping Location | 1848376..1848400,1848426..1848475 |
Strand + |
| EST ID | JUNC00013300.emb |
Support Model | Y |
More Info |
| Mapping Location | 1848332..1848400,1848526..1848596 |
Strand + |
| EST ID | JUNC00013301.emb |
Support Model | Y |
More Info |
| Mapping Location | 1848606..1848669,1848802..1848869 |
Strand + |
| EST ID | JUNC00014466.ara |
Support Model | Y |
More Info |
| Mapping Location | 1848332..1848400,1848526..1848590 |
Strand + |
| EST ID | JUNC00014467.ara |
Support Model | Y |
More Info |
| Mapping Location | 1848599..1848669,1848802..1848869 |
Strand + |
| EST ID | Tetur11g05190 |
Support Model | Y |
More Info |
| Mapping Location | 1847974..1848400,1848526..1848669,1848802..1850105 |
Strand + |
- General Comments
- n/a"20160216000000
|
