- Gene ID
- tetur01g16040
- Locus
- tetur01g16040
- Functional Description
- Bm trachealess
- Gene Type
- protein-coding gene
- Contig
- scaffold_1
- Last Modified On
- 19 February 2016 0h00
- History
-
Annotator
- Name
- Cao Thi Ngoc Phuong
- Email
- phcao@psb.vib-ugent.be
- Lab
- Bioinformatics and Evolutionary Genomics
- Status
- active
Gene Actions
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Gene Function
- Short Name
- trh
- Alternative Names
- TETUR02g08590
- Definition
- Bm trachealess
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Read Counts
Gene Ontology
- Cellular Component
-
1.
nucleus
- Molecular Function
-
1.
protein binding
2.
obsolete transcription regulator activity
3.
protein dimerization activity
- Biological Process
-
1.
regulation of transcription, DNA-templated
- Comment
-
Unknown GO IDs: GO:0045449
Protein Domains
Domain ID | Description | Database |
PTHR23043 |
n/a |
PANTHER |
IPR013767 |
PAS fold |
InterPro |
TMhelix |
Region of a membrane-bound protein predicted to be embedded in the membrane. |
TMHMM |
IPR000014 |
PAS domain |
InterPro |
IPR011598 |
Myc-type, basic helix-loop-helix (bHLH) domain |
InterPro |
G3DSA:3.30.450.20 |
n/a |
Gene3D |
CYTOPLASMIC_DOMAIN |
Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. |
Phobius |
NON_CYTOPLASMIC_DOMAIN |
Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region |
Phobius |
IPR013655 |
PAS fold-3 |
InterPro |
SignalP-noTM |
n/a |
SignalP_EUK |
Coil |
n/a |
Coils |
PTHR23043:SF26 |
n/a |
PANTHER |
TRANSMEMBRANE |
Region of a membrane-bound protein predicted to be embedded in the membrane. |
Phobius |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_015789644.1 |
PREDICTED: neuronal PAS domain-containing protein 1-like isoform X2 [Tetranychus urticae]
Evalue: 0.0 | Bitscore: 1017 Identities = 771/771 (100%), Positives = 771/771 (100%), Gaps = 0/771 (0%) |
NCBI |
Show Blast
|
XP_015789636.1 |
PREDICTED: neuronal PAS domain-containing protein 1-like isoform X1 [Tetranychus urticae]
Evalue: 0.0 | Bitscore: 1009 Identities = 770/774 (99%), Positives = 771/774 (99%), Gaps = 3/774 (0%) |
NCBI |
Show Blast
|
XP_013774186.1 |
PREDICTED: protein trachealess-like [Limulus polyphemus]
Evalue: 9e-163 | Bitscore: 509 Identities = 267/429 (62%), Positives = 317/429 (74%), Gaps = 34/429 (8%) |
NCBI |
Show Blast
|
XP_014275367.1 |
PREDICTED: protein trachealess isoform X5 [Halyomorpha halys]
Evalue: 2e-159 | Bitscore: 496 Identities = 264/435 (61%), Positives = 312/435 (72%), Gaps = 41/435 (9%) |
NCBI |
Show Blast
|
XP_014275365.1 |
PREDICTED: protein trachealess isoform X3 [Halyomorpha halys]
Evalue: 3e-159 | Bitscore: 496 Identities = 269/459 (59%), Positives = 317/459 (69%), Gaps = 46/459 (10%) |
NCBI |
Show Blast
|
XP_011166209.1 |
PREDICTED: protein trachealess isoform X2 [Solenopsis invicta]
Evalue: 7e-158 | Bitscore: 495 Identities = 258/429 (60%), Positives = 315/429 (73%), Gaps = 30/429 (7%) |
NCBI |
Show Blast
|
XP_011876411.1 |
PREDICTED: protein trachealess isoform X2 [Vollenhovia emeryi]
Evalue: 4e-157 | Bitscore: 495 Identities = 258/437 (59%), Positives = 321/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
XP_012528677.1 |
PREDICTED: protein trachealess isoform X2 [Monomorium pharaonis]
Evalue: 6e-157 | Bitscore: 494 Identities = 258/437 (59%), Positives = 319/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
XP_014248928.1 |
PREDICTED: protein trachealess isoform X3 [Cimex lectularius]
Evalue: 2e-158 | Bitscore: 493 Identities = 266/469 (57%), Positives = 324/469 (69%), Gaps = 51/469 (11%) |
NCBI |
Show Blast
|
XP_015590968.1 |
PREDICTED: protein trachealess isoform X2 [Cephus cinctus]
Evalue: 1e-156 | Bitscore: 493 Identities = 260/437 (59%), Positives = 318/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_967112.2 |
PREDICTED: similar to Bm trachealess [Tribolium ca 820
Evalue: 8e-158 | Bitscore: 484 Identities = 256/465 (55%), Positives = 314/465 (68%), Gaps = 49/465 (11%) |
Insects |
Show Blast
|
XP_967112.2 |
PREDICTED: similar to Bm trachealess [Tribolium ca 820
Evalue: 8e-158 | Bitscore: 484 Identities = 256/465 (55%), Positives = 314/465 (68%), Gaps = 49/465 (11%) |
Insects |
Show Blast
|
XP_967112.2 |
PREDICTED: similar to Bm trachealess [Tribolium ca 820
Evalue: 8e-158 | Bitscore: 484 Identities = 256/465 (55%), Positives = 314/465 (68%), Gaps = 49/465 (11%) |
Insects |
Show Blast
|
XP_967112.2 |
PREDICTED: similar to Bm trachealess [Tribolium ca 820
Evalue: 8e-158 | Bitscore: 484 Identities = 256/465 (55%), Positives = 314/465 (68%), Gaps = 49/465 (11%) |
Insects |
Show Blast
|
XP_391937.2 |
PREDICTED: similar to Protein trachealess isoform 963
Evalue: 1e-155 | Bitscore: 483 Identities = 257/427 (60%), Positives = 309/427 (72%), Gaps = 39/427 (9%) |
Insects |
Show Blast
|
XP_391937.2 |
PREDICTED: similar to Protein trachealess isoform 963
Evalue: 1e-155 | Bitscore: 483 Identities = 257/427 (60%), Positives = 309/427 (72%), Gaps = 39/427 (9%) |
Insects |
Show Blast
|
XP_391937.2 |
PREDICTED: similar to Protein trachealess isoform 963
Evalue: 1e-155 | Bitscore: 483 Identities = 257/427 (60%), Positives = 309/427 (72%), Gaps = 39/427 (9%) |
Insects |
Show Blast
|
XP_391937.2 |
PREDICTED: similar to Protein trachealess isoform 963
Evalue: 1e-155 | Bitscore: 483 Identities = 257/427 (60%), Positives = 309/427 (72%), Gaps = 39/427 (9%) |
Insects |
Show Blast
|
Dappu0000012509 |
jgi|Dappu1|59022|e_gw1.77.82.1
Evalue: 5e-159 | Bitscore: 473 Identities = 249/425 (59%), Positives = 311/425 (73%), Gaps = 35/425 (8%) |
Insects |
Show Blast
|
Dappu0000012509 |
jgi|Dappu1|59022|e_gw1.77.82.1
Evalue: 5e-159 | Bitscore: 473 Identities = 249/425 (59%), Positives = 311/425 (73%), Gaps = 35/425 (8%) |
Insects |
Show Blast
|
Dappu0000012509 |
jgi|Dappu1|59022|e_gw1.77.82.1
Evalue: 5e-159 | Bitscore: 473 Identities = 249/425 (59%), Positives = 311/425 (73%), Gaps = 35/425 (8%) |
Insects |
Show Blast
|
Dappu0000012509 |
jgi|Dappu1|59022|e_gw1.77.82.1
Evalue: 5e-159 | Bitscore: 473 Identities = 249/425 (59%), Positives = 311/425 (73%), Gaps = 35/425 (8%) |
Insects |
Show Blast
|
AAM11264.1 |
RH17284p [Drosophila melanogaster] 902
Evalue: 2e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
AAM11264.1 |
RH17284p [Drosophila melanogaster] 902
Evalue: 2e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
AAM11264.1 |
RH17284p [Drosophila melanogaster] 902
Evalue: 2e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
AAM11264.1 |
RH17284p [Drosophila melanogaster] 902
Evalue: 2e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
ABX00736.1 |
IP17239p [Drosophila melanogaster] 929
Evalue: 4e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
NP_001036575.1 |
ABI31226.1 trachealess, isoform B [Drosophila melanogaster] 929
Evalue: 4e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
ABX00736.1 |
IP17239p [Drosophila melanogaster] 929
Evalue: 4e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
NP_001036575.1 |
ABI31226.1 trachealess, isoform B [Drosophila melanogaster] 929
Evalue: 4e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
ABX00736.1 |
IP17239p [Drosophila melanogaster] 929
Evalue: 4e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
NP_001036575.1 |
ABI31226.1 trachealess, isoform B [Drosophila melanogaster] 929
Evalue: 4e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
ABX00736.1 |
IP17239p [Drosophila melanogaster] 929
Evalue: 4e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
NP_001036575.1 |
ABI31226.1 trachealess, isoform B [Drosophila melanogaster] 929
Evalue: 4e-142 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
NP_001097461.1 |
TRH_DROME ABW08426.1 trachealess, isoform C [Drosophila melanogaster] 995
Evalue: 2e-141 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
NP_001097461.1 |
TRH_DROME ABW08426.1 trachealess, isoform C [Drosophila melanogaster] 995
Evalue: 2e-141 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
NP_001097461.1 |
TRH_DROME ABW08426.1 trachealess, isoform C [Drosophila melanogaster] 995
Evalue: 2e-141 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
NP_001097461.1 |
TRH_DROME ABW08426.1 trachealess, isoform C [Drosophila melanogaster] 995
Evalue: 2e-141 | Bitscore: 447 Identities = 237/437 (54%), Positives = 301/437 (69%), Gaps = 35/437 (8%) |
Insects |
Show Blast
|
26786 |
AAEL002343-RA.1
Evalue: 4e-143 | Bitscore: 439 Identities = 225/427 (53%), Positives = 285/427 (67%), Gaps = 45/427 (11%) |
Insects |
Show Blast
|
25616 |
AAEL014740-RA.1
Evalue: 4e-143 | Bitscore: 439 Identities = 225/427 (53%), Positives = 285/427 (67%), Gaps = 45/427 (11%) |
Insects |
Show Blast
|
26786 |
AAEL002343-RA.1
Evalue: 4e-143 | Bitscore: 439 Identities = 225/427 (53%), Positives = 285/427 (67%), Gaps = 45/427 (11%) |
Insects |
Show Blast
|
25616 |
AAEL014740-RA.1
Evalue: 4e-143 | Bitscore: 439 Identities = 225/427 (53%), Positives = 285/427 (67%), Gaps = 45/427 (11%) |
Insects |
Show Blast
|
26786 |
AAEL002343-RA.1
Evalue: 4e-143 | Bitscore: 439 Identities = 225/427 (53%), Positives = 285/427 (67%), Gaps = 45/427 (11%) |
Insects |
Show Blast
|
25616 |
AAEL014740-RA.1
Evalue: 4e-143 | Bitscore: 439 Identities = 225/427 (53%), Positives = 285/427 (67%), Gaps = 45/427 (11%) |
Insects |
Show Blast
|
26786 |
AAEL002343-RA.1
Evalue: 4e-143 | Bitscore: 439 Identities = 225/427 (53%), Positives = 285/427 (67%), Gaps = 45/427 (11%) |
Insects |
Show Blast
|
25616 |
AAEL014740-RA.1
Evalue: 4e-143 | Bitscore: 439 Identities = 225/427 (53%), Positives = 285/427 (67%), Gaps = 45/427 (11%) |
Insects |
Show Blast
|
AAA96754.1 |
trachealess 924
Evalue: 5e-139 | Bitscore: 438 Identities = 238/467 (51%), Positives = 300/467 (64%), Gaps = 65/467 (14%) |
Insects |
Show Blast
|
AAA96754.1 |
trachealess 924
Evalue: 5e-139 | Bitscore: 438 Identities = 238/467 (51%), Positives = 300/467 (64%), Gaps = 65/467 (14%) |
Insects |
Show Blast
|
AAA96754.1 |
trachealess 924
Evalue: 5e-139 | Bitscore: 438 Identities = 238/467 (51%), Positives = 300/467 (64%), Gaps = 65/467 (14%) |
Insects |
Show Blast
|
AAA96754.1 |
trachealess 924
Evalue: 5e-139 | Bitscore: 438 Identities = 238/467 (51%), Positives = 300/467 (64%), Gaps = 65/467 (14%) |
Insects |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
EEC16594.1 |
single-minded, putative [Ixodes scapularis] 623
Evalue: 1e-38 | Bitscore: 150 Identities = 88/300 (29%), Positives = 148/300 (49%), Gaps = 55/300 (18%) |
Ixodes |
Show Blast
|
EEC16594.1 |
single-minded, putative [Ixodes scapularis] 623
Evalue: 1e-38 | Bitscore: 150 Identities = 88/300 (29%), Positives = 148/300 (49%), Gaps = 55/300 (18%) |
Ixodes |
Show Blast
|
EEC16594.1 |
single-minded, putative [Ixodes scapularis] 623
Evalue: 1e-38 | Bitscore: 150 Identities = 88/300 (29%), Positives = 148/300 (49%), Gaps = 55/300 (18%) |
Ixodes |
Show Blast
|
EEC16594.1 |
single-minded, putative [Ixodes scapularis] 623
Evalue: 1e-38 | Bitscore: 150 Identities = 88/300 (29%), Positives = 148/300 (49%), Gaps = 55/300 (18%) |
Ixodes |
Show Blast
|
EEC18554.1 |
hypoxia-inducible factor 1 alpha, putative [Ixodes 324
Evalue: 6e-32 | Bitscore: 126 Identities = 108/367 (29%), Positives = 161/367 (44%), Gaps = 88/367 (24%) |
Ixodes |
Show Blast
|
EEC18554.1 |
hypoxia-inducible factor 1 alpha, putative [Ixodes 324
Evalue: 6e-32 | Bitscore: 126 Identities = 108/367 (29%), Positives = 161/367 (44%), Gaps = 88/367 (24%) |
Ixodes |
Show Blast
|
EEC18554.1 |
hypoxia-inducible factor 1 alpha, putative [Ixodes 324
Evalue: 6e-32 | Bitscore: 126 Identities = 108/367 (29%), Positives = 161/367 (44%), Gaps = 88/367 (24%) |
Ixodes |
Show Blast
|
EEC18554.1 |
hypoxia-inducible factor 1 alpha, putative [Ixodes 324
Evalue: 6e-32 | Bitscore: 126 Identities = 108/367 (29%), Positives = 161/367 (44%), Gaps = 88/367 (24%) |
Ixodes |
Show Blast
|
EEC20546.1 |
aryl hydrocarbon receptor nuclear translocator, pu 382
Evalue: 4e-17 | Bitscore: 82 Identities = 84/373 (23%), Positives = 152/373 (41%), Gaps = 52/373 (14%) |
Ixodes |
Show Blast
|
EEC20546.1 |
aryl hydrocarbon receptor nuclear translocator, pu 382
Evalue: 4e-17 | Bitscore: 82 Identities = 84/373 (23%), Positives = 152/373 (41%), Gaps = 52/373 (14%) |
Ixodes |
Show Blast
|
EEC20546.1 |
aryl hydrocarbon receptor nuclear translocator, pu 382
Evalue: 4e-17 | Bitscore: 82 Identities = 84/373 (23%), Positives = 152/373 (41%), Gaps = 52/373 (14%) |
Ixodes |
Show Blast
|
EEC20546.1 |
aryl hydrocarbon receptor nuclear translocator, pu 382
Evalue: 4e-17 | Bitscore: 82 Identities = 84/373 (23%), Positives = 152/373 (41%), Gaps = 52/373 (14%) |
Ixodes |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_015789644.1 |
PREDICTED: neuronal PAS domain-containing protein 1-like isoform X2 [Tetranychus urticae]
Evalue: 0.0 | Bitscore: 1017 Identities = 771/771 (100%), Positives = 771/771 (100%), Gaps = 0/771 (0%) |
NCBI |
Show Blast
|
XP_015789636.1 |
PREDICTED: neuronal PAS domain-containing protein 1-like isoform X1 [Tetranychus urticae]
Evalue: 0.0 | Bitscore: 1009 Identities = 770/774 (99%), Positives = 771/774 (99%), Gaps = 3/774 (0%) |
NCBI |
Show Blast
|
XP_013774186.1 |
PREDICTED: protein trachealess-like [Limulus polyphemus]
Evalue: 8e-163 | Bitscore: 509 Identities = 267/429 (62%), Positives = 317/429 (74%), Gaps = 34/429 (8%) |
NCBI |
Show Blast
|
XP_013774186.1 |
PREDICTED: protein trachealess-like [Limulus polyphemus]
Evalue: 9e-163 | Bitscore: 509 Identities = 267/429 (62%), Positives = 317/429 (74%), Gaps = 34/429 (8%) |
NCBI |
Show Blast
|
XP_013774186.1 |
PREDICTED: protein trachealess-like [Limulus polyphemus]
Evalue: 9e-163 | Bitscore: 509 Identities = 267/429 (62%), Positives = 317/429 (74%), Gaps = 34/429 (8%) |
NCBI |
Show Blast
|
XP_013774186.1 |
PREDICTED: protein trachealess-like [Limulus polyphemus]
Evalue: 9e-163 | Bitscore: 509 Identities = 267/429 (62%), Positives = 317/429 (74%), Gaps = 34/429 (8%) |
NCBI |
Show Blast
|
XP_014275367.1 |
PREDICTED: protein trachealess isoform X5 [Halyomorpha halys]
Evalue: 2e-159 | Bitscore: 496 Identities = 264/435 (61%), Positives = 312/435 (72%), Gaps = 41/435 (9%) |
NCBI |
Show Blast
|
XP_014275367.1 |
PREDICTED: protein trachealess isoform X5 [Halyomorpha halys]
Evalue: 2e-159 | Bitscore: 496 Identities = 264/435 (61%), Positives = 312/435 (72%), Gaps = 41/435 (9%) |
NCBI |
Show Blast
|
XP_014275367.1 |
PREDICTED: protein trachealess isoform X5 [Halyomorpha halys]
Evalue: 2e-159 | Bitscore: 496 Identities = 264/435 (61%), Positives = 312/435 (72%), Gaps = 41/435 (9%) |
NCBI |
Show Blast
|
XP_014275367.1 |
PREDICTED: protein trachealess isoform X5 [Halyomorpha halys]
Evalue: 2e-159 | Bitscore: 496 Identities = 264/435 (61%), Positives = 312/435 (72%), Gaps = 41/435 (9%) |
NCBI |
Show Blast
|
XP_014275365.1 |
PREDICTED: protein trachealess isoform X3 [Halyomorpha halys]
Evalue: 3e-159 | Bitscore: 496 Identities = 269/459 (59%), Positives = 317/459 (69%), Gaps = 46/459 (10%) |
NCBI |
Show Blast
|
XP_014275365.1 |
PREDICTED: protein trachealess isoform X3 [Halyomorpha halys]
Evalue: 3e-159 | Bitscore: 496 Identities = 269/459 (59%), Positives = 317/459 (69%), Gaps = 46/459 (10%) |
NCBI |
Show Blast
|
XP_014275365.1 |
PREDICTED: protein trachealess isoform X3 [Halyomorpha halys]
Evalue: 3e-159 | Bitscore: 496 Identities = 269/459 (59%), Positives = 317/459 (69%), Gaps = 46/459 (10%) |
NCBI |
Show Blast
|
XP_014275365.1 |
PREDICTED: protein trachealess isoform X3 [Halyomorpha halys]
Evalue: 3e-159 | Bitscore: 496 Identities = 269/459 (59%), Positives = 317/459 (69%), Gaps = 46/459 (10%) |
NCBI |
Show Blast
|
XP_011166209.1 |
PREDICTED: protein trachealess isoform X2 [Solenopsis invicta]
Evalue: 6e-158 | Bitscore: 495 Identities = 258/429 (60%), Positives = 315/429 (73%), Gaps = 30/429 (7%) |
NCBI |
Show Blast
|
XP_011166209.1 |
PREDICTED: protein trachealess isoform X2 [Solenopsis invicta]
Evalue: 7e-158 | Bitscore: 495 Identities = 258/429 (60%), Positives = 315/429 (73%), Gaps = 30/429 (7%) |
NCBI |
Show Blast
|
XP_011166209.1 |
PREDICTED: protein trachealess isoform X2 [Solenopsis invicta]
Evalue: 7e-158 | Bitscore: 495 Identities = 258/429 (60%), Positives = 315/429 (73%), Gaps = 30/429 (7%) |
NCBI |
Show Blast
|
XP_011166209.1 |
PREDICTED: protein trachealess isoform X2 [Solenopsis invicta]
Evalue: 7e-158 | Bitscore: 495 Identities = 258/429 (60%), Positives = 315/429 (73%), Gaps = 30/429 (7%) |
NCBI |
Show Blast
|
XP_011876411.1 |
PREDICTED: protein trachealess isoform X2 [Vollenhovia emeryi]
Evalue: 4e-157 | Bitscore: 495 Identities = 258/437 (59%), Positives = 321/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
XP_012528677.1 |
PREDICTED: protein trachealess isoform X2 [Monomorium pharaonis]
Evalue: 6e-157 | Bitscore: 494 Identities = 258/437 (59%), Positives = 319/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
XP_012528677.1 |
PREDICTED: protein trachealess isoform X2 [Monomorium pharaonis]
Evalue: 6e-157 | Bitscore: 494 Identities = 258/437 (59%), Positives = 319/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
XP_012528677.1 |
PREDICTED: protein trachealess isoform X2 [Monomorium pharaonis]
Evalue: 6e-157 | Bitscore: 494 Identities = 258/437 (59%), Positives = 319/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
XP_012528677.1 |
PREDICTED: protein trachealess isoform X2 [Monomorium pharaonis]
Evalue: 6e-157 | Bitscore: 494 Identities = 258/437 (59%), Positives = 319/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
XP_014248928.1 |
PREDICTED: protein trachealess isoform X3 [Cimex lectularius]
Evalue: 1e-158 | Bitscore: 493 Identities = 266/469 (57%), Positives = 324/469 (69%), Gaps = 51/469 (11%) |
NCBI |
Show Blast
|
XP_014248928.1 |
PREDICTED: protein trachealess isoform X3 [Cimex lectularius]
Evalue: 2e-158 | Bitscore: 493 Identities = 266/469 (57%), Positives = 324/469 (69%), Gaps = 51/469 (11%) |
NCBI |
Show Blast
|
XP_014248928.1 |
PREDICTED: protein trachealess isoform X3 [Cimex lectularius]
Evalue: 2e-158 | Bitscore: 493 Identities = 266/469 (57%), Positives = 324/469 (69%), Gaps = 51/469 (11%) |
NCBI |
Show Blast
|
XP_014248928.1 |
PREDICTED: protein trachealess isoform X3 [Cimex lectularius]
Evalue: 2e-158 | Bitscore: 493 Identities = 266/469 (57%), Positives = 324/469 (69%), Gaps = 51/469 (11%) |
NCBI |
Show Blast
|
XP_015590968.1 |
PREDICTED: protein trachealess isoform X2 [Cephus cinctus]
Evalue: 1e-156 | Bitscore: 493 Identities = 260/437 (59%), Positives = 318/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
XP_015590968.1 |
PREDICTED: protein trachealess isoform X2 [Cephus cinctus]
Evalue: 1e-156 | Bitscore: 493 Identities = 260/437 (59%), Positives = 318/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
XP_015590968.1 |
PREDICTED: protein trachealess isoform X2 [Cephus cinctus]
Evalue: 1e-156 | Bitscore: 493 Identities = 260/437 (59%), Positives = 318/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
XP_014248929.1 |
PREDICTED: protein trachealess isoform X4 [Cimex lectularius]
Evalue: 3e-158 | Bitscore: 491 Identities = 258/436 (59%), Positives = 315/436 (72%), Gaps = 44/436 (10%) |
NCBI |
Show Blast
|
XP_014248929.1 |
PREDICTED: protein trachealess isoform X4 [Cimex lectularius]
Evalue: 4e-158 | Bitscore: 491 Identities = 258/436 (59%), Positives = 315/436 (72%), Gaps = 44/436 (10%) |
NCBI |
Show Blast
|
XP_014248929.1 |
PREDICTED: protein trachealess isoform X4 [Cimex lectularius]
Evalue: 4e-158 | Bitscore: 491 Identities = 258/436 (59%), Positives = 315/436 (72%), Gaps = 44/436 (10%) |
NCBI |
Show Blast
|
XP_014248929.1 |
PREDICTED: protein trachealess isoform X4 [Cimex lectularius]
Evalue: 4e-158 | Bitscore: 491 Identities = 258/436 (59%), Positives = 315/436 (72%), Gaps = 44/436 (10%) |
NCBI |
Show Blast
|
XP_011639647.1 |
PREDICTED: protein trachealess isoform X1 [Pogonomyrmex barbatus]
Evalue: 3e-156 | Bitscore: 491 Identities = 257/437 (59%), Positives = 321/437 (73%), Gaps = 30/437 (7%) |
NCBI |
Show Blast
|
EFX72497.1 |
hypothetical protein DAPPUDRAFT_59022, partial [Daphnia pulex]
Evalue: 2e-156 | Bitscore: 473 Identities = 249/425 (59%), Positives = 311/425 (73%), Gaps = 35/425 (8%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
tetur06g06010 |
length:903 (mRNA) (SIM) (single-minded Transcription Factor) (sim) (single-minded) (n/a) (single-minded homolog 1)
Evalue: 6e-36 | Bitscore: 145 Identities = 75/151 (50%), Positives = 100/151 (66%), Gaps = 10/151 (7%) |
Self |
Show Blast
|
tetur06g06010 |
length:903 (mRNA) (SIM) (single-minded Transcription Factor) (sim) (single-minded) (n/a) (single-minded homolog 1)
Evalue: 6e-36 | Bitscore: 145 Identities = 75/151 (50%), Positives = 100/151 (66%), Gaps = 10/151 (7%) |
Self |
Show Blast
|
tetur06g06010 |
length:903 (mRNA) (SIM) (single-minded Transcription Factor) (sim) (single-minded) (n/a) (single-minded homolog 1)
Evalue: 6e-36 | Bitscore: 145 Identities = 75/151 (50%), Positives = 100/151 (66%), Gaps = 10/151 (7%) |
Self |
Show Blast
|
tetur06g06010 |
length:903 (mRNA) (SIM) (single-minded Transcription Factor) (sim) (single-minded) (n/a) (single-minded homolog 1)
Evalue: 6e-36 | Bitscore: 145 Identities = 75/151 (50%), Positives = 100/151 (66%), Gaps = 10/151 (7%) |
Self |
Show Blast
|
tetur02g13280 |
length:1304 (mRNA) (n/a) (hypoxia-inducible factor 1 alpha) (n/a) (hypoxia-inducible factor 1 alpha)
Evalue: 2e-29 | Bitscore: 125 Identities = 118/411 (29%), Positives = 183/411 (45%), Gaps = 90/411 (22%) |
Self |
Show Blast
|
tetur02g13280 |
length:1304 (mRNA) (n/a) (hypoxia-inducible factor 1 alpha) (n/a) (hypoxia-inducible factor 1 alpha)
Evalue: 2e-29 | Bitscore: 125 Identities = 118/411 (29%), Positives = 183/411 (45%), Gaps = 90/411 (22%) |
Self |
Show Blast
|
tetur02g13280 |
length:1304 (mRNA) (n/a) (hypoxia-inducible factor 1 alpha) (n/a) (hypoxia-inducible factor 1 alpha)
Evalue: 2e-29 | Bitscore: 125 Identities = 118/411 (29%), Positives = 183/411 (45%), Gaps = 90/411 (22%) |
Self |
Show Blast
|
tetur02g13280 |
length:1302 (mRNA) (n/a) (hypoxia-inducible factor 1 alpha) (n/a) (hypoxia-inducible factor 1 alpha)
Evalue: 2e-29 | Bitscore: 124 Identities = 118/410 (29%), Positives = 182/410 (44%), Gaps = 88/410 (21%) |
Self |
Show Blast
|
tetur03g01600 |
length:943 (mRNA) (ss) (spineless) (HLH) (Helix-loop-helix DNA-binding domain)
Evalue: 1e-27 | Bitscore: 119 Identities = 91/370 (25%), Positives = 161/370 (44%), Gaps = 40/370 (11%) |
Self |
Show Blast
|
tetur03g01600 |
length:943 (mRNA) (ss) (spineless) (HLH) (Helix-loop-helix DNA-binding domain)
Evalue: 1e-27 | Bitscore: 119 Identities = 91/370 (25%), Positives = 161/370 (44%), Gaps = 40/370 (11%) |
Self |
Show Blast
|
tetur03g01600 |
length:943 (mRNA) (ss) (spineless) (HLH) (Helix-loop-helix DNA-binding domain)
Evalue: 1e-27 | Bitscore: 119 Identities = 91/370 (25%), Positives = 161/370 (44%), Gaps = 40/370 (11%) |
Self |
Show Blast
|
tetur03g01600 |
length:943 (mRNA) (ss) (spineless) (HLH) (Helix-loop-helix DNA-binding domain)
Evalue: 1e-27 | Bitscore: 119 Identities = 91/370 (25%), Positives = 161/370 (44%), Gaps = 40/370 (11%) |
Self |
Show Blast
|
tetur01g08330 |
length:663 (mRNA) (TGO) (Tango, Aryl hydrocarbon receptor nuclear translocator, Hypoxia-inducible factor 1)
Evalue: 4e-15 | Bitscore: 78 Identities = 82/377 (22%), Positives = 157/377 (42%), Gaps = 48/377 (13%) |
Self |
Show Blast
|
tetur01g08330 |
length:663 (mRNA) (TGO) (Tango, Aryl hydrocarbon receptor nuclear translocator, Hypoxia-inducible factor 1)
Evalue: 4e-15 | Bitscore: 78 Identities = 82/377 (22%), Positives = 157/377 (42%), Gaps = 48/377 (13%) |
Self |
Show Blast
|
tetur01g08330 |
length:663 (mRNA) (TGO) (Tango, Aryl hydrocarbon receptor nuclear translocator, Hypoxia-inducible factor 1)
Evalue: 4e-15 | Bitscore: 78 Identities = 82/377 (22%), Positives = 157/377 (42%), Gaps = 48/377 (13%) |
Self |
Show Blast
|
tetur01g08330 |
length:645 (mRNA) (TGO) (Tango; Aryl hydrocarbon receptor nuclear translocator; Hypoxia-inducible factor 1;)
Evalue: 4e-15 | Bitscore: 78 Identities = 82/377 (22%), Positives = 157/377 (42%), Gaps = 48/377 (13%) |
Self |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
Q24119 |
Protein trachealess OS=Drosophila melanogaster GN=trh PE=1 SV=4
Evalue: 1e-134 | Bitscore: 431 Identities = 237/466 (51%), Positives = 301/466 (65%), Gaps = 64/466 (14%) |
SwissP |
Show Blast
|
Q24119 |
Protein trachealess OS=Drosophila melanogaster GN=trh PE=1 SV=4
Evalue: 1e-134 | Bitscore: 431 Identities = 237/466 (51%), Positives = 301/466 (65%), Gaps = 64/466 (14%) |
SwissP |
Show Blast
|
Q24119 |
Protein trachealess OS=Drosophila melanogaster GN=trh PE=1 SV=4
Evalue: 1e-134 | Bitscore: 431 Identities = 237/466 (51%), Positives = 301/466 (65%), Gaps = 64/466 (14%) |
SwissP |
Show Blast
|
Q24119 |
Protein trachealess OS=Drosophila melanogaster GN=trh PE=1 SV=4
Evalue: 1e-134 | Bitscore: 431 Identities = 237/466 (51%), Positives = 301/466 (65%), Gaps = 64/466 (14%) |
SwissP |
Show Blast
|
Q9QZQ0 |
Neuronal PAS domain-containing protein 3 OS=Mus musculus GN=Npas3 PE=2 SV=1
Evalue: 1e-119 | Bitscore: 389 Identities = 211/422 (50%), Positives = 275/422 (65%), Gaps = 39/422 (9%) |
SwissP |
Show Blast
|
Q9QZQ0 |
Neuronal PAS domain-containing protein 3 OS=Mus musculus GN=Npas3 PE=2 SV=1
Evalue: 1e-119 | Bitscore: 389 Identities = 211/422 (50%), Positives = 275/422 (65%), Gaps = 39/422 (9%) |
SwissP |
Show Blast
|
Q9QZQ0 |
Neuronal PAS domain-containing protein 3 OS=Mus musculus GN=Npas3 PE=2 SV=1
Evalue: 1e-119 | Bitscore: 389 Identities = 211/422 (50%), Positives = 275/422 (65%), Gaps = 39/422 (9%) |
SwissP |
Show Blast
|
Q9QZQ0 |
Neuronal PAS domain-containing protein 3 OS=Mus musculus GN=Npas3 PE=2 SV=1
Evalue: 1e-119 | Bitscore: 389 Identities = 211/422 (50%), Positives = 275/422 (65%), Gaps = 39/422 (9%) |
SwissP |
Show Blast
|
Q8IXF0 |
Neuronal PAS domain-containing protein 3 OS=Homo sapiens GN=NPAS3 PE=2 SV=1
Evalue: 3e-119 | Bitscore: 388 Identities = 213/421 (51%), Positives = 275/421 (65%), Gaps = 35/421 (8%) |
SwissP |
Show Blast
|
Q8IXF0 |
Neuronal PAS domain-containing protein 3 OS=Homo sapiens GN=NPAS3 PE=2 SV=1
Evalue: 3e-119 | Bitscore: 388 Identities = 213/421 (51%), Positives = 275/421 (65%), Gaps = 35/421 (8%) |
SwissP |
Show Blast
|
Q8IXF0 |
Neuronal PAS domain-containing protein 3 OS=Homo sapiens GN=NPAS3 PE=2 SV=1
Evalue: 3e-119 | Bitscore: 388 Identities = 213/421 (51%), Positives = 275/421 (65%), Gaps = 35/421 (8%) |
SwissP |
Show Blast
|
Q8IXF0 |
Neuronal PAS domain-containing protein 3 OS=Homo sapiens GN=NPAS3 PE=2 SV=1
Evalue: 3e-119 | Bitscore: 388 Identities = 213/421 (51%), Positives = 275/421 (65%), Gaps = 35/421 (8%) |
SwissP |
Show Blast
|
Q99742 |
Neuronal PAS domain-containing protein 1 OS=Homo sapiens GN=NPAS1 PE=2 SV=2
Evalue: 3e-102 | Bitscore: 333 Identities = 196/416 (47%), Positives = 250/416 (60%), Gaps = 49/416 (12%) |
SwissP |
Show Blast
|
Q99742 |
Neuronal PAS domain-containing protein 1 OS=Homo sapiens GN=NPAS1 PE=2 SV=2
Evalue: 3e-102 | Bitscore: 333 Identities = 196/416 (47%), Positives = 250/416 (60%), Gaps = 49/416 (12%) |
SwissP |
Show Blast
|
Q99742 |
Neuronal PAS domain-containing protein 1 OS=Homo sapiens GN=NPAS1 PE=2 SV=2
Evalue: 3e-102 | Bitscore: 333 Identities = 196/416 (47%), Positives = 250/416 (60%), Gaps = 49/416 (12%) |
SwissP |
Show Blast
|
Q99742 |
Neuronal PAS domain-containing protein 1 OS=Homo sapiens GN=NPAS1 PE=2 SV=2
Evalue: 3e-102 | Bitscore: 333 Identities = 196/416 (47%), Positives = 250/416 (60%), Gaps = 49/416 (12%) |
SwissP |
Show Blast
|
P97459 |
Neuronal PAS domain-containing protein 1 OS=Mus musculus GN=Npas1 PE=1 SV=1
Evalue: 1e-99 | Bitscore: 327 Identities = 191/417 (46%), Positives = 247/417 (59%), Gaps = 44/417 (11%) |
SwissP |
Show Blast
|
P97459 |
Neuronal PAS domain-containing protein 1 OS=Mus musculus GN=Npas1 PE=1 SV=1
Evalue: 1e-99 | Bitscore: 327 Identities = 191/417 (46%), Positives = 247/417 (59%), Gaps = 44/417 (11%) |
SwissP |
Show Blast
|
P97459 |
Neuronal PAS domain-containing protein 1 OS=Mus musculus GN=Npas1 PE=1 SV=1
Evalue: 1e-99 | Bitscore: 327 Identities = 191/417 (46%), Positives = 247/417 (59%), Gaps = 44/417 (11%) |
SwissP |
Show Blast
|
P97459 |
Neuronal PAS domain-containing protein 1 OS=Mus musculus GN=Npas1 PE=1 SV=1
Evalue: 1e-99 | Bitscore: 327 Identities = 191/417 (46%), Positives = 247/417 (59%), Gaps = 44/417 (11%) |
SwissP |
Show Blast
|
P05709 |
Protein single-minded OS=Drosophila melanogaster GN=sim PE=1 SV=3
Evalue: 2e-73 | Bitscore: 258 Identities = 153/424 (36%), Positives = 230/424 (54%), Gaps = 65/424 (15%) |
SwissP |
Show Blast
|
P05709 |
Protein single-minded OS=Drosophila melanogaster GN=sim PE=1 SV=3
Evalue: 2e-73 | Bitscore: 258 Identities = 153/424 (36%), Positives = 230/424 (54%), Gaps = 65/424 (15%) |
SwissP |
Show Blast
|
P05709 |
Protein single-minded OS=Drosophila melanogaster GN=sim PE=1 SV=3
Evalue: 2e-73 | Bitscore: 258 Identities = 153/424 (36%), Positives = 230/424 (54%), Gaps = 65/424 (15%) |
SwissP |
Show Blast
|
P05709 |
Protein single-minded OS=Drosophila melanogaster GN=sim PE=1 SV=3
Evalue: 2e-73 | Bitscore: 258 Identities = 153/424 (36%), Positives = 230/424 (54%), Gaps = 65/424 (15%) |
SwissP |
Show Blast
|
Q14190 |
Single-minded homolog 2 OS=Homo sapiens GN=SIM2 PE=1 SV=2
Evalue: 3e-72 | Bitscore: 254 Identities = 147/417 (35%), Positives = 220/417 (53%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
Q14190 |
Single-minded homolog 2 OS=Homo sapiens GN=SIM2 PE=1 SV=2
Evalue: 3e-72 | Bitscore: 254 Identities = 147/417 (35%), Positives = 220/417 (53%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
Q14190 |
Single-minded homolog 2 OS=Homo sapiens GN=SIM2 PE=1 SV=2
Evalue: 3e-72 | Bitscore: 254 Identities = 147/417 (35%), Positives = 220/417 (53%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
Q14190 |
Single-minded homolog 2 OS=Homo sapiens GN=SIM2 PE=1 SV=2
Evalue: 3e-72 | Bitscore: 254 Identities = 147/417 (35%), Positives = 220/417 (53%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
Q61079 |
Single-minded homolog 2 OS=Mus musculus GN=Sim2 PE=1 SV=1
Evalue: 7e-72 | Bitscore: 253 Identities = 147/417 (35%), Positives = 219/417 (53%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
Q61079 |
Single-minded homolog 2 OS=Mus musculus GN=Sim2 PE=1 SV=1
Evalue: 7e-72 | Bitscore: 253 Identities = 147/417 (35%), Positives = 219/417 (53%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
Q61079 |
Single-minded homolog 2 OS=Mus musculus GN=Sim2 PE=1 SV=1
Evalue: 7e-72 | Bitscore: 253 Identities = 147/417 (35%), Positives = 219/417 (53%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
Q61079 |
Single-minded homolog 2 OS=Mus musculus GN=Sim2 PE=1 SV=1
Evalue: 7e-72 | Bitscore: 253 Identities = 147/417 (35%), Positives = 219/417 (53%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
P81133 |
Single-minded homolog 1 OS=Homo sapiens GN=SIM1 PE=2 SV=2
Evalue: 6e-71 | Bitscore: 253 Identities = 150/417 (36%), Positives = 217/417 (52%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
P81133 |
Single-minded homolog 1 OS=Homo sapiens GN=SIM1 PE=2 SV=2
Evalue: 6e-71 | Bitscore: 253 Identities = 150/417 (36%), Positives = 217/417 (52%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
P81133 |
Single-minded homolog 1 OS=Homo sapiens GN=SIM1 PE=2 SV=2
Evalue: 6e-71 | Bitscore: 253 Identities = 150/417 (36%), Positives = 217/417 (52%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
P81133 |
Single-minded homolog 1 OS=Homo sapiens GN=SIM1 PE=2 SV=2
Evalue: 6e-71 | Bitscore: 253 Identities = 150/417 (36%), Positives = 217/417 (52%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
A1YFY6 |
Single-minded homolog 1 OS=Pan paniscus GN=SIM1 PE=3 SV=1
Evalue: 7e-71 | Bitscore: 253 Identities = 150/417 (36%), Positives = 217/417 (52%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
A1YFY6 |
Single-minded homolog 1 OS=Pan paniscus GN=SIM1 PE=3 SV=1
Evalue: 7e-71 | Bitscore: 253 Identities = 150/417 (36%), Positives = 217/417 (52%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
A1YFY6 |
Single-minded homolog 1 OS=Pan paniscus GN=SIM1 PE=3 SV=1
Evalue: 7e-71 | Bitscore: 253 Identities = 150/417 (36%), Positives = 217/417 (52%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
A1YFY6 |
Single-minded homolog 1 OS=Pan paniscus GN=SIM1 PE=3 SV=1
Evalue: 7e-71 | Bitscore: 253 Identities = 150/417 (36%), Positives = 217/417 (52%), Gaps = 81/417 (19%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
EST ID | CCIO1147.b1 |
Support Model | Y |
More Info |
Mapping Location | 7611182..7611338,7611693..7611799,7612905..7613055,7613131..7613485 |
Strand - |
EST ID | CCIO3131.b1 |
Support Model | Y |
More Info |
Mapping Location | 7610251..7610822,7611140..7611312 |
Strand - |
EST ID | CCIO4308.b1 |
Support Model | Y |
More Info |
Mapping Location | 7611693..7611799, 7612905..7613055, 7613131..7613485, 7614120..7614250, 7616278..7616306 |
Strand - |
EST ID | JUNC00023808.adu |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7610773..7610822,7610848..7610872 |
Strand - |
EST ID | JUNC00023809.adu |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. EST is mapped on the opposite strand of the predicted model |
Mapping Location | 7611490..7611517,7611572..7611629 |
Strand + |
EST ID | JUNC00023810.adu |
Support Model | Y |
More Info |
Mapping Location | 7620897..7620932,7635067..7635110 |
Strand - |
EST ID | JUNC00028833.bea |
Support Model | Y |
More Info |
Mapping Location | 7610788..7610822,7611140..7611198 |
Strand - |
EST ID | JUNC00028834.bea |
Support Model | Y |
More Info |
Mapping Location | 7611281..7611338,7611693..7611709 |
Strand - |
EST ID | JUNC00028835.bea |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7611468..7611521,7611576..7611596 |
Strand - |
EST ID | JUNC00028836.bea |
Support Model | Y |
More Info |
Mapping Location | 7611742..7611799,7612905..7612974 |
Strand - |
EST ID | JUNC00028837.bea |
Support Model | Y |
More Info |
Mapping Location | 7612999..7613055,7613131..7613197 |
Strand - |
EST ID | JUNC00028838.bea |
Support Model | Y |
More Info |
Mapping Location | 7613421..7613485,7614120..7614164 |
Strand - |
EST ID | JUNC00028840.bea |
Support Model | Y |
More Info |
Mapping Location | 7620883..7620932,7635067..7635105 |
Strand - |
EST ID | JUNC00031880.lar |
Support Model | Y |
More Info |
Mapping Location | 7610755..7610822,7611140..7611206 |
Strand - |
EST ID | JUNC00031881.lar |
Support Model | Y |
More Info |
Mapping Location | 7611314..7611338,7611693..7611742 |
Strand - |
EST ID | JUNC00031882.lar |
Support Model | Y |
More Info |
Mapping Location | 7611739..7611799,7612905..7612968 |
Strand - |
EST ID | JUNC00031883.lar |
Support Model | Y |
More Info |
Mapping Location | 7612988..7613055,7613131..7613169 |
Strand - |
EST ID | JUNC00031884.lar |
Support Model | Y |
More Info |
Mapping Location | 7613419..7613485,7614120..7614188 |
Strand - |
EST ID | JUNC00031885.lar |
Support Model | Y |
More Info |
Mapping Location | 7614182..7614250,7616278..7616333 |
Strand - |
EST ID | JUNC00031886.lar |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7620883..7620932,7620958..7620982 |
Strand - |
EST ID | JUNC00031887.lar |
Support Model | Y |
More Info |
Mapping Location | 7620868..7620932,7635067..7635115 |
Strand - |
EST ID | JUNC00031888.lar |
Support Model | Y |
More Info |
Mapping Location | 7635102..7635162,7642683..7642753 |
Strand - |
EST ID | JUNC00032728.nym |
Support Model | Y |
More Info |
Mapping Location | 7610756..7610822,7611140..7611179 |
Strand - |
EST ID | JUNC00032729.nym |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7611493..7611521,7611576..7611621 |
Strand - |
EST ID | JUNC00032730.nym |
Support Model | Y |
More Info |
Mapping Location | 7612993..7613055,7613131..7613199 |
Strand - |
EST ID | JUNC00032731.nym |
Support Model | Y |
More Info |
Mapping Location | 7613420..7613485,7614120..7614155 |
Strand - |
EST ID | JUNC00032732.nym |
Support Model | Y |
More Info |
Mapping Location | 7614193..7614250,7616278..7616326 |
Strand - |
EST ID | JUNC00032733.nym |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7616367..7616403,7620799..7620836 |
Strand - |
EST ID | JUNC00032734.nym |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7620883..7620932,7620958..7620982 |
Strand - |
EST ID | JUNC00032735.nym |
Support Model | Y |
More Info |
Mapping Location | 7620876..7620932,7635067..7635108 |
Strand - |
EST ID | JUNC00032736.nym |
Support Model | Y |
More Info |
Mapping Location | 7635102..7635162,7642683..7642753 |
Strand - |
EST ID | JUNC00034581.emb |
Support Model | Y |
More Info |
Mapping Location | 7610755..7610822,7611140..7611206 |
Strand - |
EST ID | JUNC00034582.emb |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. EST is mapped on the opposite strand of the predicted model |
Mapping Location | 7611492..7611517,7611572..7611620 |
Strand + |
EST ID | JUNC00034583.emb |
Support Model | Y |
More Info |
Mapping Location | 7611733..7611799,7612905..7612971 |
Strand - |
EST ID | JUNC00034584.emb |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7613031..7613055,7613081..7613130 |
Strand - |
EST ID | JUNC00034585.emb |
Support Model | Y |
More Info |
Mapping Location | 7612989..7613055,7613131..7613197 |
Strand - |
EST ID | JUNC00034586.emb |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7613436..7613485,7613511..7613535 |
Strand - |
EST ID | JUNC00034587.emb |
Support Model | Y |
More Info |
Mapping Location | 7613420..7613485,7614120..7614188 |
Strand - |
EST ID | JUNC00034588.emb |
Support Model | Y |
More Info |
Mapping Location | 7614189..7614250,7616278..7616335 |
Strand - |
EST ID | JUNC00034589.emb |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7616345..7616403,7620799..7620867 |
Strand - |
EST ID | JUNC00034590.emb |
Support Model | Y |
More Info |
Mapping Location | 7616337..7616403,7620808..7620876 |
Strand - |
EST ID | JUNC00034591.emb |
Support Model | Y |
More Info |
Mapping Location | 7620876..7620932,7635067..7635127 |
Strand - |
EST ID | JUNC00034592.emb |
Support Model | Y |
More Info |
Mapping Location | 7635102..7635162,7642683..7642751 |
Strand - |
EST ID | JUNC00038036.ara |
Support Model | Y |
More Info |
Mapping Location | 7610764..7610822,7611140..7611203 |
Strand - |
EST ID | JUNC00038037.ara |
Support Model | Y |
More Info |
Mapping Location | 7611281..7611338,7611693..7611759 |
Strand - |
EST ID | JUNC00038038.ara |
Support Model | Y |
More Info |
Mapping Location | 7611734..7611799,7612905..7612969 |
Strand - |
EST ID | JUNC00038039.ara |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7613006..7613055,7613081..7613130 |
Strand - |
EST ID | JUNC00038040.ara |
Support Model | Y |
More Info |
Mapping Location | 7612989..7613055,7613131..7613197 |
Strand - |
EST ID | JUNC00038041.ara |
Support Model | Y |
More Info |
Mapping Location | 7613420..7613485,7614120..7614190 |
Strand - |
EST ID | JUNC00038042.ara |
Support Model | Y |
More Info |
Mapping Location | 7614184..7614250,7616278..7616343 |
Strand - |
EST ID | JUNC00038043.ara |
Support Model | Y |
More Info |
Mapping Location | 7620904..7620932,7635067..7635112 |
Strand - |
EST ID | JUNC00038044.ara |
Support Model | Y |
More Info |
Mapping Location | 7635127..7635162,7642683..7642751 |
Strand - |
EST ID | CCIO1147.b1 |
Support Model | Y |
More Info |
Mapping Location | 7611182..7611338,7611693..7611799,7612905..7613055,7613131..7613485 |
Strand - |
EST ID | CCIO3131.b1 |
Support Model | Y |
More Info |
Mapping Location | 7610251..7610822,7611140..7611312 |
Strand - |
EST ID | CCIO4308.b1 |
Support Model | Y |
More Info |
Mapping Location | 7611693..7611799, 7612905..7613055, 7613131..7613485, 7614120..7614250, 7616278..7616306 |
Strand - |
EST ID | JUNC00023808.adu |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7610773..7610822,7610848..7610872 |
Strand - |
EST ID | JUNC00023809.adu |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. EST is mapped on the opposite strand of the predicted model |
Mapping Location | 7611490..7611517,7611572..7611629 |
Strand + |
EST ID | JUNC00023810.adu |
Support Model | Y |
More Info |
Mapping Location | 7620897..7620932,7635067..7635110 |
Strand - |
EST ID | JUNC00028833.bea |
Support Model | Y |
More Info |
Mapping Location | 7610788..7610822,7611140..7611198 |
Strand - |
EST ID | JUNC00028834.bea |
Support Model | Y |
More Info |
Mapping Location | 7611281..7611338,7611693..7611709 |
Strand - |
EST ID | JUNC00028835.bea |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7611468..7611521,7611576..7611596 |
Strand - |
EST ID | JUNC00028836.bea |
Support Model | Y |
More Info |
Mapping Location | 7611742..7611799,7612905..7612974 |
Strand - |
EST ID | JUNC00028837.bea |
Support Model | Y |
More Info |
Mapping Location | 7612999..7613055,7613131..7613197 |
Strand - |
EST ID | JUNC00028838.bea |
Support Model | Y |
More Info |
Mapping Location | 7613421..7613485,7614120..7614164 |
Strand - |
EST ID | JUNC00028840.bea |
Support Model | Y |
More Info |
Mapping Location | 7620883..7620932,7635067..7635105 |
Strand - |
EST ID | JUNC00031880.lar |
Support Model | Y |
More Info |
Mapping Location | 7610755..7610822,7611140..7611206 |
Strand - |
EST ID | JUNC00031881.lar |
Support Model | Y |
More Info |
Mapping Location | 7611314..7611338,7611693..7611742 |
Strand - |
EST ID | JUNC00031882.lar |
Support Model | Y |
More Info |
Mapping Location | 7611739..7611799,7612905..7612968 |
Strand - |
EST ID | JUNC00031883.lar |
Support Model | Y |
More Info |
Mapping Location | 7612988..7613055,7613131..7613169 |
Strand - |
EST ID | JUNC00031884.lar |
Support Model | Y |
More Info |
Mapping Location | 7613419..7613485,7614120..7614188 |
Strand - |
EST ID | JUNC00031885.lar |
Support Model | Y |
More Info |
Mapping Location | 7614182..7614250,7616278..7616333 |
Strand - |
EST ID | JUNC00031886.lar |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7620883..7620932,7620958..7620982 |
Strand - |
EST ID | JUNC00031887.lar |
Support Model | Y |
More Info |
Mapping Location | 7620868..7620932,7635067..7635115 |
Strand - |
EST ID | JUNC00031888.lar |
Support Model | Y |
More Info |
Mapping Location | 7635102..7635162,7642683..7642753 |
Strand - |
EST ID | JUNC00032728.nym |
Support Model | Y |
More Info |
Mapping Location | 7610756..7610822,7611140..7611179 |
Strand - |
EST ID | JUNC00032729.nym |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7611493..7611521,7611576..7611621 |
Strand - |
EST ID | JUNC00032730.nym |
Support Model | Y |
More Info |
Mapping Location | 7612993..7613055,7613131..7613199 |
Strand - |
EST ID | JUNC00032731.nym |
Support Model | Y |
More Info |
Mapping Location | 7613420..7613485,7614120..7614155 |
Strand - |
EST ID | JUNC00032732.nym |
Support Model | Y |
More Info |
Mapping Location | 7614193..7614250,7616278..7616326 |
Strand - |
EST ID | JUNC00032733.nym |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7616367..7616403,7620799..7620836 |
Strand - |
EST ID | JUNC00032734.nym |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7620883..7620932,7620958..7620982 |
Strand - |
EST ID | JUNC00032735.nym |
Support Model | Y |
More Info |
Mapping Location | 7620876..7620932,7635067..7635108 |
Strand - |
EST ID | JUNC00032736.nym |
Support Model | Y |
More Info |
Mapping Location | 7635102..7635162,7642683..7642753 |
Strand - |
EST ID | JUNC00034581.emb |
Support Model | Y |
More Info |
Mapping Location | 7610755..7610822,7611140..7611206 |
Strand - |
EST ID | JUNC00034582.emb |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. EST is mapped on the opposite strand of the predicted model |
Mapping Location | 7611492..7611517,7611572..7611620 |
Strand + |
EST ID | JUNC00034583.emb |
Support Model | Y |
More Info |
Mapping Location | 7611733..7611799,7612905..7612971 |
Strand - |
EST ID | JUNC00034584.emb |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7613031..7613055,7613081..7613130 |
Strand - |
EST ID | JUNC00034585.emb |
Support Model | Y |
More Info |
Mapping Location | 7612989..7613055,7613131..7613197 |
Strand - |
EST ID | JUNC00034586.emb |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7613436..7613485,7613511..7613535 |
Strand - |
EST ID | JUNC00034587.emb |
Support Model | Y |
More Info |
Mapping Location | 7613420..7613485,7614120..7614188 |
Strand - |
EST ID | JUNC00034588.emb |
Support Model | Y |
More Info |
Mapping Location | 7614189..7614250,7616278..7616335 |
Strand - |
EST ID | JUNC00034589.emb |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7616345..7616403,7620799..7620867 |
Strand - |
EST ID | JUNC00034590.emb |
Support Model | Y |
More Info |
Mapping Location | 7616337..7616403,7620808..7620876 |
Strand - |
EST ID | JUNC00034591.emb |
Support Model | Y |
More Info |
Mapping Location | 7620876..7620932,7635067..7635127 |
Strand - |
EST ID | JUNC00034592.emb |
Support Model | Y |
More Info |
Mapping Location | 7635102..7635162,7642683..7642751 |
Strand - |
EST ID | JUNC00038036.ara |
Support Model | Y |
More Info |
Mapping Location | 7610764..7610822,7611140..7611203 |
Strand - |
EST ID | JUNC00038037.ara |
Support Model | Y |
More Info |
Mapping Location | 7611281..7611338,7611693..7611759 |
Strand - |
EST ID | JUNC00038038.ara |
Support Model | Y |
More Info |
Mapping Location | 7611734..7611799,7612905..7612969 |
Strand - |
EST ID | JUNC00038039.ara |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7613006..7613055,7613081..7613130 |
Strand - |
EST ID | JUNC00038040.ara |
Support Model | Y |
More Info |
Mapping Location | 7612989..7613055,7613131..7613197 |
Strand - |
EST ID | JUNC00038041.ara |
Support Model | Y |
More Info |
Mapping Location | 7613420..7613485,7614120..7614190 |
Strand - |
EST ID | JUNC00038042.ara |
Support Model | Y |
More Info |
Mapping Location | 7614184..7614250,7616278..7616343 |
Strand - |
EST ID | JUNC00038043.ara |
Support Model | Y |
More Info |
Mapping Location | 7620904..7620932,7635067..7635112 |
Strand - |
EST ID | JUNC00038044.ara |
Support Model | Y |
More Info |
Mapping Location | 7635127..7635162,7642683..7642751 |
Strand - |
EST ID | CCIO1147.b1 |
Support Model | Y |
More Info |
Mapping Location | 7611182..7611338,7611693..7611799,7612905..7613055,7613131..7613485 |
Strand - |
EST ID | CCIO3131.b1 |
Support Model | Y |
More Info |
Mapping Location | 7610251..7610822,7611140..7611312 |
Strand - |
EST ID | CCIO4308.b1 |
Support Model | Y |
More Info |
Mapping Location | 7611693..7611799, 7612905..7613055, 7613131..7613485, 7614120..7614250, 7616278..7616306 |
Strand - |
EST ID | JUNC00023808.adu |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7610773..7610822,7610848..7610872 |
Strand - |
EST ID | JUNC00023809.adu |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. EST is mapped on the opposite strand of the predicted model |
Mapping Location | 7611490..7611517,7611572..7611629 |
Strand + |
EST ID | JUNC00023810.adu |
Support Model | Y |
More Info |
Mapping Location | 7620897..7620932,7635067..7635110 |
Strand - |
EST ID | JUNC00028833.bea |
Support Model | Y |
More Info |
Mapping Location | 7610788..7610822,7611140..7611198 |
Strand - |
EST ID | JUNC00028834.bea |
Support Model | Y |
More Info |
Mapping Location | 7611281..7611338,7611693..7611709 |
Strand - |
EST ID | JUNC00028835.bea |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7611468..7611521,7611576..7611596 |
Strand - |
EST ID | JUNC00028836.bea |
Support Model | Y |
More Info |
Mapping Location | 7611742..7611799,7612905..7612974 |
Strand - |
EST ID | JUNC00028837.bea |
Support Model | Y |
More Info |
Mapping Location | 7612999..7613055,7613131..7613197 |
Strand - |
EST ID | JUNC00028838.bea |
Support Model | Y |
More Info |
Mapping Location | 7613421..7613485,7614120..7614164 |
Strand - |
EST ID | JUNC00028840.bea |
Support Model | Y |
More Info |
Mapping Location | 7620883..7620932,7635067..7635105 |
Strand - |
EST ID | JUNC00031880.lar |
Support Model | Y |
More Info |
Mapping Location | 7610755..7610822,7611140..7611206 |
Strand - |
EST ID | JUNC00031881.lar |
Support Model | Y |
More Info |
Mapping Location | 7611314..7611338,7611693..7611742 |
Strand - |
EST ID | JUNC00031882.lar |
Support Model | Y |
More Info |
Mapping Location | 7611739..7611799,7612905..7612968 |
Strand - |
EST ID | JUNC00031883.lar |
Support Model | Y |
More Info |
Mapping Location | 7612988..7613055,7613131..7613169 |
Strand - |
EST ID | JUNC00031884.lar |
Support Model | Y |
More Info |
Mapping Location | 7613419..7613485,7614120..7614188 |
Strand - |
EST ID | JUNC00031885.lar |
Support Model | Y |
More Info |
Mapping Location | 7614182..7614250,7616278..7616333 |
Strand - |
EST ID | JUNC00031886.lar |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7620883..7620932,7620958..7620982 |
Strand - |
EST ID | JUNC00031887.lar |
Support Model | Y |
More Info |
Mapping Location | 7620868..7620932,7635067..7635115 |
Strand - |
EST ID | JUNC00031888.lar |
Support Model | Y |
More Info |
Mapping Location | 7635102..7635162,7642683..7642753 |
Strand - |
EST ID | JUNC00032728.nym |
Support Model | Y |
More Info |
Mapping Location | 7610756..7610822,7611140..7611179 |
Strand - |
EST ID | JUNC00032729.nym |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7611493..7611521,7611576..7611621 |
Strand - |
EST ID | JUNC00032730.nym |
Support Model | Y |
More Info |
Mapping Location | 7612993..7613055,7613131..7613199 |
Strand - |
EST ID | JUNC00032731.nym |
Support Model | Y |
More Info |
Mapping Location | 7613420..7613485,7614120..7614155 |
Strand - |
EST ID | JUNC00032732.nym |
Support Model | Y |
More Info |
Mapping Location | 7614193..7614250,7616278..7616326 |
Strand - |
EST ID | JUNC00032733.nym |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7616367..7616403,7620799..7620836 |
Strand - |
EST ID | JUNC00032734.nym |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7620883..7620932,7620958..7620982 |
Strand - |
EST ID | JUNC00032735.nym |
Support Model | Y |
More Info |
Mapping Location | 7620876..7620932,7635067..7635108 |
Strand - |
EST ID | JUNC00032736.nym |
Support Model | Y |
More Info |
Mapping Location | 7635102..7635162,7642683..7642753 |
Strand - |
EST ID | JUNC00034581.emb |
Support Model | Y |
More Info |
Mapping Location | 7610755..7610822,7611140..7611206 |
Strand - |
EST ID | JUNC00034582.emb |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. EST is mapped on the opposite strand of the predicted model |
Mapping Location | 7611492..7611517,7611572..7611620 |
Strand + |
EST ID | JUNC00034583.emb |
Support Model | Y |
More Info |
Mapping Location | 7611733..7611799,7612905..7612971 |
Strand - |
EST ID | JUNC00034584.emb |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7613031..7613055,7613081..7613130 |
Strand - |
EST ID | JUNC00034585.emb |
Support Model | Y |
More Info |
Mapping Location | 7612989..7613055,7613131..7613197 |
Strand - |
EST ID | JUNC00034586.emb |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7613436..7613485,7613511..7613535 |
Strand - |
EST ID | JUNC00034587.emb |
Support Model | Y |
More Info |
Mapping Location | 7613420..7613485,7614120..7614188 |
Strand - |
EST ID | JUNC00034588.emb |
Support Model | Y |
More Info |
Mapping Location | 7614189..7614250,7616278..7616335 |
Strand - |
EST ID | JUNC00034589.emb |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 7616345..7616403,7620799..7620867 |
Strand - |
EST ID | JUNC00034590.emb |
Support Model | Y |
More Info |
Mapping Location | 7616337..7616403,7620808..7620876 |
Strand - |
EST ID | JUNC00034591.emb |
Support Model | Y |
More Info |
Mapping Location | 7620876..7620932,7635067..7635127 |
Strand - |
EST ID | JUNC00034592.emb |
Support Model | Y |
More Info |
Mapping Location | 7635102..7635162,7642683..7642751 |
Strand - |
EST ID | JUNC00038036.ara |
Support Model | Y |
More Info |
Mapping Location | 7610764..7610822,7611140..7611203 |
Strand - |
EST ID | JUNC00038037.ara |
Support Model | Y |
More Info |
Mapping Location | 7611281..7611338,7611693..7611759 |
Strand - |
EST ID | JUNC00038038.ara |
Support Model | Y |
More Info |
Mapping Location | 7611734..7611799,7612905..7612969 |
Strand - |
EST ID | JUNC00038039.ara |
Support Model | N |
More Info |
Comment | EST has one or more non canonical splice site(s) |
Mapping Location | 7613006..7613055,7613081..7613130 |
Strand - |
EST ID | JUNC00038040.ara |
Support Model | Y |
More Info |
Mapping Location | 7612989..7613055,7613131..7613197 |
Strand - |
EST ID | JUNC00038041.ara |
Support Model | Y |
More Info |
Mapping Location | 7613420..7613485,7614120..7614190 |
Strand - |
EST ID | JUNC00038042.ara |
Support Model | Y |
More Info |
Mapping Location | 7614184..7614250,7616278..7616343 |
Strand - |
EST ID | JUNC00038043.ara |
Support Model | Y |
More Info |
Mapping Location | 7620904..7620932,7635067..7635112 |
Strand - |
EST ID | JUNC00038044.ara |
Support Model | Y |
More Info |
Mapping Location | 7635127..7635162,7642683..7642751 |
Strand - |
- General Comments
- n/a"20160216000000
|