- Gene ID
- Ot19g00200
- Locus
- Ot19g00200
- Functional Description
- Galactosyltransferases (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom19
- Last Modified On
- 09 March 2010 15h11
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Galactosyltransferases (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
catalytic activity
- Biological Process
-
n/a
Protein Domains
| Domain ID | Description | Database |
|---|
|
PTHR23033 |
BETA1,3-GALACTOSYLTRANSFERASE |
HMMPanther |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL58330.1 |
Galactosyltransferases (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 639
Identities = 313/313 (100%), Positives = 313/313 (100%), Gaps = 0/313 (0%) |
NCBI |
Show Blast
|
| CAL58375.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 7e-51 | Bitscore: 205
Identities = 106/143 (74%), Positives = 114/143 (79%), Gaps = 1/143 (0%) |
NCBI |
Show Blast
|
| Ot19g00650 |
chrom19.0001 [84573..84914,85086..85625]
Evalue: 3e-48 | Bitscore: 187
Identities = 106/143 (74%), Positives = 114/143 (79%), Gaps = 1/143 (0%) |
Self |
Show Blast
|
| XP_002155616.1 |
PREDICTED: similar to predicted protein [Hydra magnipapillata]
Evalue: 3e-27 | Bitscore: 126
Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 21/241 (8%) |
NCBI |
Show Blast
|
| Q5F3G7 |
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Gallus gallus GN=C1GALT1 PE=2 SV=1
Evalue: 3e-24 | Bitscore: 112
Identities = 78/242 (32%), Positives = 127/242 (52%), Gaps = 28/242 (11%) |
SwissP |
Show Blast
|
| XP_623076.1 |
PREDICTED: similar to CG9520-PB, isoform B [Apis mellifera]
Evalue: 4e-23 | Bitscore: 112
Identities = 84/253 (33%), Positives = 120/253 (47%), Gaps = 23/253 (9%) |
NCBI |
Show Blast
|
| NP_499293.2 |
hypothetical protein C38H2.2 [Caenorhabditis elegans] sp|Q18515.2|C1GLT_CAEEL RecName: Full=Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransf
Evalue: 1e-22 | Bitscore: 111
Identities = 80/240 (33%), Positives = 113/240 (47%), Gaps = 19/240 (7%) |
NCBI |
Show Blast
|
| XP_001996338.1 |
GH25081 [Drosophila grimshawi]
Evalue: 1e-22 | Bitscore: 110
Identities = 85/261 (32%), Positives = 120/261 (45%), Gaps = 23/261 (8%) |
NCBI |
Show Blast
|
| XP_002642393.1 |
Hypothetical protein CBG18398 [Caenorhabditis briggsae]
Evalue: 1e-22 | Bitscore: 110
Identities = 80/240 (33%), Positives = 113/240 (47%), Gaps = 19/240 (7%) |
NCBI |
Show Blast
|
| NP_001012575.1 |
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Gallus gallus]
Evalue: 2e-22 | Bitscore: 110
Identities = 79/254 (31%), Positives = 130/254 (51%), Gaps = 28/254 (11%) |
NCBI |
Show Blast
|
| No hits found against database GOS with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL58330.1 |
Galactosyltransferases (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 639
Identities = 313/313 (100%), Positives = 313/313 (100%), Gaps = 0/313 (0%) |
NCBI |
Show Blast
|
| CAL58375.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 7e-51 | Bitscore: 205
Identities = 106/143 (74%), Positives = 114/143 (79%), Gaps = 1/143 (0%) |
NCBI |
Show Blast
|
| XP_002155616.1 |
PREDICTED: similar to predicted protein [Hydra magnipapillata]
Evalue: 3e-27 | Bitscore: 126
Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 21/241 (8%) |
NCBI |
Show Blast
|
| XP_623076.1 |
PREDICTED: similar to CG9520-PB, isoform B [Apis mellifera]
Evalue: 4e-23 | Bitscore: 112
Identities = 84/253 (33%), Positives = 120/253 (47%), Gaps = 23/253 (9%) |
NCBI |
Show Blast
|
| NP_499293.2 |
hypothetical protein C38H2.2 [Caenorhabditis elegans] sp|Q18515.2|C1GLT_CAEEL RecName: Full=Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransf
Evalue: 1e-22 | Bitscore: 111
Identities = 80/240 (33%), Positives = 113/240 (47%), Gaps = 19/240 (7%) |
NCBI |
Show Blast
|
| XP_001996338.1 |
GH25081 [Drosophila grimshawi]
Evalue: 1e-22 | Bitscore: 110
Identities = 85/261 (32%), Positives = 120/261 (45%), Gaps = 23/261 (8%) |
NCBI |
Show Blast
|
| XP_002642393.1 |
Hypothetical protein CBG18398 [Caenorhabditis briggsae]
Evalue: 1e-22 | Bitscore: 110
Identities = 80/240 (33%), Positives = 113/240 (47%), Gaps = 19/240 (7%) |
NCBI |
Show Blast
|
| NP_001012575.1 |
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Gallus gallus]
Evalue: 2e-22 | Bitscore: 110
Identities = 79/254 (31%), Positives = 130/254 (51%), Gaps = 28/254 (11%) |
NCBI |
Show Blast
|
| XP_001638469.1 |
predicted protein [Nematostella vectensis]
Evalue: 2e-22 | Bitscore: 110
Identities = 79/252 (31%), Positives = 121/252 (48%), Gaps = 24/252 (9%) |
NCBI |
Show Blast
|
| XP_002002559.1 |
GI12045 [Drosophila mojavensis]
Evalue: 2e-22 | Bitscore: 110
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 21/243 (8%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot19g00650 |
chrom19.0001 [84573..84914,85086..85625]
Evalue: 3e-48 | Bitscore: 187
Identities = 106/143 (74%), Positives = 114/143 (79%), Gaps = 1/143 (0%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q5F3G7 |
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Gallus gallus GN=C1GALT1 PE=2 SV=1
Evalue: 3e-24 | Bitscore: 112
Identities = 78/242 (32%), Positives = 127/242 (52%), Gaps = 28/242 (11%) |
SwissP |
Show Blast
|
| Q7K237 |
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Drosophila melanogaster GN=C1GalTA PE=2 SV=1
Evalue: 6e-23 | Bitscore: 108
Identities = 79/243 (32%), Positives = 117/243 (48%), Gaps = 21/243 (8%) |
SwissP |
Show Blast
|
| Q18515 |
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Caenorhabditis elegans GN=C38H2.2 PE=2 SV=2
Evalue: 6e-23 | Bitscore: 108
Identities = 80/240 (33%), Positives = 113/240 (47%), Gaps = 19/240 (7%) |
SwissP |
Show Blast
|
| Q9NS00 |
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Homo sapiens GN=C1GALT1 PE=1 SV=1
Evalue: 2e-22 | Bitscore: 106
Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 30/255 (11%) |
SwissP |
Show Blast
|
| Q0VC84 |
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Bos taurus GN=C1GALT1 PE=2 SV=1
Evalue: 7e-22 | Bitscore: 104
Identities = 76/241 (31%), Positives = 121/241 (50%), Gaps = 30/241 (12%) |
SwissP |
Show Blast
|
| Q9JJ05 |
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Rattus norvegicus GN=C1galt1 PE=1 SV=1
Evalue: 9e-22 | Bitscore: 104
Identities = 75/254 (29%), Positives = 127/254 (50%), Gaps = 28/254 (11%) |
SwissP |
Show Blast
|
| Q6GNL1 |
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Xenopus laevis GN=c1galt1 PE=2 SV=1
Evalue: 3e-21 | Bitscore: 102
Identities = 81/245 (33%), Positives = 117/245 (47%), Gaps = 27/245 (11%) |
SwissP |
Show Blast
|
| Q7SYI5 |
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B OS=Danio rerio GN=c1galt1b PE=2 SV=1
Evalue: 3e-21 | Bitscore: 102
Identities = 79/243 (32%), Positives = 115/243 (47%), Gaps = 25/243 (10%) |
SwissP |
Show Blast
|
| Q9JJ06 |
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Mus musculus GN=C1galt1 PE=1 SV=1
Evalue: 7e-21 | Bitscore: 101
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 28/240 (11%) |
SwissP |
Show Blast
|
| Q08BL3 |
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A OS=Danio rerio GN=c1galt1a PE=2 SV=1
Evalue: 7e-18 | Bitscore: 91
Identities = 72/238 (30%), Positives = 111/238 (46%), Gaps = 25/238 (10%) |
SwissP |
Show Blast
|
| No hits found against database Tair with an e-value better than 1e-3. |
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | SPTREMBL:Q9NS00 |
Support Model | Y |
More Info |
| Mapping Location | 33369..34307 |
Strand + |
|
