- Gene ID
- Ot18g01860
- Locus
- Ot18g01860
- Functional Description
- U4/U6-associated splicing factor PRP4 (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom18
- Last Modified On
- 09 March 2010 15h04
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- U4/U6-associated splicing factor PRP4 (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
protein serine/threonine kinase activity
- Biological Process
-
1.
protein phosphorylation
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR017441 |
Protein kinase, ATP binding site |
InterPro |
|
IPR002290 |
Serine/threonine-protein kinase domain |
InterPro |
|
G3DSA:3.30.200.20 |
no description |
Gene3D |
|
IPR017442 |
Serine/threonine-protein kinase-like domain |
InterPro |
|
PTHR11295 |
CDC2, MAP KINASE-RELATED |
HMMPanther |
|
IPR008271 |
Serine/threonine-protein kinase, active site |
InterPro |
|
IPR011009 |
Protein kinase-like domain |
InterPro |
|
IPR000719 |
Protein kinase, catalytic domain |
InterPro |
|
G3DSA:1.10.510.10 |
no description |
Gene3D |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL58633.1 |
serin/threonin-kinase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 937
Identities = 472/472 (100%), Positives = 472/472 (100%), Gaps = 0/472 (0%) |
NCBI |
Show Blast
|
| XP_001422264.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-72 | Bitscore: 278
Identities = 127/153 (83%), Positives = 137/153 (89%), Gaps = 0/153 (0%) |
NCBI |
Show Blast
|
| XP_002294916.1 |
dual-specificity tyrosine-phosphorylation regulated kinase 1a-like protein [Thalassiosira pseudonana CCMP1335]
Evalue: 3e-63 | Bitscore: 247
Identities = 146/391 (37%), Positives = 207/391 (52%), Gaps = 55/391 (14%) |
NCBI |
Show Blast
|
| XP_001898840.1 |
Protein kinase domain containing protein [Brugia malayi]
Evalue: 2e-61 | Bitscore: 241
Identities = 142/392 (36%), Positives = 203/392 (51%), Gaps = 64/392 (16%) |
NCBI |
Show Blast
|
| XP_002575139.1 |
serine/threonine protein kinase [Schistosoma mansoni]
Evalue: 1e-59 | Bitscore: 235
Identities = 144/389 (37%), Positives = 209/389 (53%), Gaps = 55/389 (14%) |
NCBI |
Show Blast
|
| XP_002597206.1 |
hypothetical protein BRAFLDRAFT_203631 [Branchiostoma floridae]
Evalue: 6e-59 | Bitscore: 233
Identities = 152/422 (36%), Positives = 217/422 (51%), Gaps = 70/422 (16%) |
NCBI |
Show Blast
|
| XP_001745521.1 |
hypothetical protein [Monosiga brevicollis MX1]
Evalue: 9e-59 | Bitscore: 232
Identities = 143/382 (37%), Positives = 203/382 (53%), Gaps = 61/382 (15%) |
NCBI |
Show Blast
|
| XP_002121838.1 |
PREDICTED: similar to dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A [Ciona intestinalis]
Evalue: 2e-58 | Bitscore: 231
Identities = 145/401 (36%), Positives = 207/401 (51%), Gaps = 65/401 (16%) |
NCBI |
Show Blast
|
| XP_002182223.1 |
predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Evalue: 3e-57 | Bitscore: 227
Identities = 136/390 (34%), Positives = 199/390 (51%), Gaps = 81/390 (20%) |
NCBI |
Show Blast
|
| XP_001656726.1 |
Dual specificity tyrosine-phosphorylation-regulated kinase [Aedes aegypti]
Evalue: 3e-57 | Bitscore: 227
Identities = 144/385 (37%), Positives = 202/385 (52%), Gaps = 70/385 (18%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAE18085.1 |
unknown [environmental sequence]
Evalue: 3e-58 | Bitscore: 225
Identities = 126/243 (51%), Positives = 156/243 (64%), Gaps = 19/243 (7%) |
GOS |
Show Blast
|
| EAC78763.1 |
unknown [environmental sequence]
Evalue: 3e-42 | Bitscore: 172
Identities = 103/257 (40%), Positives = 136/257 (52%), Gaps = 29/257 (11%) |
GOS |
Show Blast
|
| EAK03129.1 |
unknown [environmental sequence]
Evalue: 7e-37 | Bitscore: 154
Identities = 113/389 (29%), Positives = 172/389 (44%), Gaps = 78/389 (20%) |
GOS |
Show Blast
|
| EAC10431.1 |
unknown [environmental sequence]
Evalue: 5e-31 | Bitscore: 135
Identities = 79/226 (34%), Positives = 121/226 (53%), Gaps = 14/226 (6%) |
GOS |
Show Blast
|
| EAB43129.1 |
unknown [environmental sequence]
Evalue: 7e-31 | Bitscore: 134
Identities = 59/119 (49%), Positives = 81/119 (68%) |
GOS |
Show Blast
|
| EAD99531.1 |
unknown [environmental sequence]
Evalue: 2e-25 | Bitscore: 116
Identities = 57/138 (41%), Positives = 87/138 (63%), Gaps = 1/138 (0%) |
GOS |
Show Blast
|
| EAH55747.1 |
unknown [environmental sequence]
Evalue: 5e-25 | Bitscore: 115
Identities = 88/271 (32%), Positives = 130/271 (47%), Gaps = 32/271 (11%) |
GOS |
Show Blast
|
| EAH47049.1 |
unknown [environmental sequence]
Evalue: 6e-25 | Bitscore: 115
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 29/260 (11%) |
GOS |
Show Blast
|
| EAD73988.1 |
unknown [environmental sequence]
Evalue: 1e-22 | Bitscore: 107
Identities = 64/128 (50%), Positives = 76/128 (59%), Gaps = 12/128 (9%) |
GOS |
Show Blast
|
| EAD05008.1 |
unknown [environmental sequence]
Evalue: 8e-22 | Bitscore: 104
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 19/182 (10%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL58633.1 |
serin/threonin-kinase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 937
Identities = 472/472 (100%), Positives = 472/472 (100%), Gaps = 0/472 (0%) |
NCBI |
Show Blast
|
| XP_001422264.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-72 | Bitscore: 278
Identities = 127/153 (83%), Positives = 137/153 (89%), Gaps = 0/153 (0%) |
NCBI |
Show Blast
|
| XP_002294916.1 |
dual-specificity tyrosine-phosphorylation regulated kinase 1a-like protein [Thalassiosira pseudonana CCMP1335]
Evalue: 3e-63 | Bitscore: 247
Identities = 146/391 (37%), Positives = 207/391 (52%), Gaps = 55/391 (14%) |
NCBI |
Show Blast
|
| XP_001898840.1 |
Protein kinase domain containing protein [Brugia malayi]
Evalue: 2e-61 | Bitscore: 241
Identities = 142/392 (36%), Positives = 203/392 (51%), Gaps = 64/392 (16%) |
NCBI |
Show Blast
|
| XP_002575139.1 |
serine/threonine protein kinase [Schistosoma mansoni]
Evalue: 1e-59 | Bitscore: 235
Identities = 144/389 (37%), Positives = 209/389 (53%), Gaps = 55/389 (14%) |
NCBI |
Show Blast
|
| XP_002597206.1 |
hypothetical protein BRAFLDRAFT_203631 [Branchiostoma floridae]
Evalue: 6e-59 | Bitscore: 233
Identities = 152/422 (36%), Positives = 217/422 (51%), Gaps = 70/422 (16%) |
NCBI |
Show Blast
|
| XP_001745521.1 |
hypothetical protein [Monosiga brevicollis MX1]
Evalue: 9e-59 | Bitscore: 232
Identities = 143/382 (37%), Positives = 203/382 (53%), Gaps = 61/382 (15%) |
NCBI |
Show Blast
|
| XP_002121838.1 |
PREDICTED: similar to dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A [Ciona intestinalis]
Evalue: 2e-58 | Bitscore: 231
Identities = 145/401 (36%), Positives = 207/401 (51%), Gaps = 65/401 (16%) |
NCBI |
Show Blast
|
| XP_002182223.1 |
predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Evalue: 3e-57 | Bitscore: 227
Identities = 136/390 (34%), Positives = 199/390 (51%), Gaps = 81/390 (20%) |
NCBI |
Show Blast
|
| XP_001656726.1 |
Dual specificity tyrosine-phosphorylation-regulated kinase [Aedes aegypti]
Evalue: 3e-57 | Bitscore: 227
Identities = 144/385 (37%), Positives = 202/385 (52%), Gaps = 70/385 (18%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot10g03620 |
chrom10.0001 [561335..561995,562046..562197,562256..563761]
Evalue: 4e-44 | Bitscore: 174
Identities = 131/399 (32%), Positives = 182/399 (45%), Gaps = 71/399 (17%) |
Self |
Show Blast
|
| Ot05g02500 |
chrom05.0001 [374232..375581,375623..376425,376466..376826]
Evalue: 1e-42 | Bitscore: 169
Identities = 129/433 (29%), Positives = 191/433 (44%), Gaps = 72/433 (16%) |
Self |
Show Blast
|
| Ot04g01790 |
chrom04.0001 [252908..253118,253227..254974]
Evalue: 2e-31 | Bitscore: 131
Identities = 103/395 (26%), Positives = 176/395 (44%), Gaps = 81/395 (20%) |
Self |
Show Blast
|
| Ot01g05560 |
chrom01.0001 [912324..913361] incomplete
Evalue: 2e-28 | Bitscore: 122
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 31/275 (11%) |
Self |
Show Blast
|
| Ot09g00650 |
chrom09.0001 [90832..91570,91901..91920]
Evalue: 3e-23 | Bitscore: 104
Identities = 71/254 (27%), Positives = 106/254 (41%), Gaps = 56/254 (22%) |
Self |
Show Blast
|
| Ot04g00510 |
chrom04.0001 [63389..63448,63633..64709]
Evalue: 4e-19 | Bitscore: 91
Identities = 77/244 (31%), Positives = 117/244 (47%), Gaps = 35/244 (14%) |
Self |
Show Blast
|
| Ot15g00120 |
chrom15.0001 [21005..22279]
Evalue: 2e-18 | Bitscore: 88
Identities = 82/277 (29%), Positives = 128/277 (46%), Gaps = 42/277 (15%) |
Self |
Show Blast
|
| Ot01g04200 |
chrom01.0001 [683639..685036,685086..685558,685616..685623, 685663..686313,686453..689046,689097..689846]
Evalue: 5e-17 | Bitscore: 84
Identities = 84/304 (27%), Positives = 124/304 (40%), Gaps = 76/304 (25%) |
Self |
Show Blast
|
| Ot04g00130 |
chrom04.0001 [14277..15227,15327..15429,15497..16839]
Evalue: 3e-16 | Bitscore: 81
Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 45/281 (16%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| P49657 |
Serine/threonine-protein kinase minibrain OS=Drosophila melanogaster GN=mnb PE=1 SV=2
Evalue: 1e-57 | Bitscore: 224
Identities = 142/385 (36%), Positives = 201/385 (52%), Gaps = 69/385 (17%) |
SwissP |
Show Blast
|
| Q13627 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Homo sapiens GN=DYRK1A PE=1 SV=2
Evalue: 8e-56 | Bitscore: 218
Identities = 138/384 (35%), Positives = 196/384 (51%), Gaps = 59/384 (15%) |
SwissP |
Show Blast
|
| Q63470 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Rattus norvegicus GN=Dyrk1a PE=1 SV=2
Evalue: 9e-56 | Bitscore: 218
Identities = 138/384 (35%), Positives = 196/384 (51%), Gaps = 59/384 (15%) |
SwissP |
Show Blast
|
| Q61214 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Mus musculus GN=Dyrk1a PE=1 SV=1
Evalue: 1e-55 | Bitscore: 218
Identities = 138/384 (35%), Positives = 196/384 (51%), Gaps = 59/384 (15%) |
SwissP |
Show Blast
|
| Q2TAE3 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus laevis GN=dyrk1a PE=2 SV=1
Evalue: 5e-55 | Bitscore: 215
Identities = 138/387 (35%), Positives = 197/387 (50%), Gaps = 65/387 (16%) |
SwissP |
Show Blast
|
| Q0IJ08 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus tropicalis GN=dyrk1a PE=2 SV=1
Evalue: 7e-55 | Bitscore: 215
Identities = 138/387 (35%), Positives = 196/387 (50%), Gaps = 65/387 (16%) |
SwissP |
Show Blast
|
| Q9Z188 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Mus musculus GN=Dyrk1b PE=1 SV=3
Evalue: 4e-54 | Bitscore: 212
Identities = 140/388 (36%), Positives = 202/388 (52%), Gaps = 67/388 (17%) |
SwissP |
Show Blast
|
| Q9Y463 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Homo sapiens GN=DYRK1B PE=1 SV=1
Evalue: 6e-54 | Bitscore: 211
Identities = 140/388 (36%), Positives = 202/388 (52%), Gaps = 67/388 (17%) |
SwissP |
Show Blast
|
| P14680 |
Dual specificity protein kinase YAK1 OS=Saccharomyces cerevisiae GN=YAK1 PE=1 SV=1
Evalue: 1e-48 | Bitscore: 194
Identities = 118/384 (30%), Positives = 197/384 (51%), Gaps = 52/384 (13%) |
SwissP |
Show Blast
|
| Q9V3D5 |
Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1
Evalue: 2e-47 | Bitscore: 190
Identities = 119/382 (31%), Positives = 182/382 (47%), Gaps = 81/382 (21%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT5G35980.2 |
| Symbols: | protein kinase family protein | chr5:14145781-14151584 FORWARD
Evalue: 2e-46 | Bitscore: 183
Identities = 123/394 (31%), Positives = 186/394 (47%), Gaps = 63/394 (15%) |
Tair |
Show Blast
|
| AT5G35980.1 |
| Symbols: | protein kinase family protein | chr5:14145781-14153214 FORWARD
Evalue: 9e-46 | Bitscore: 181
Identities = 123/394 (31%), Positives = 186/394 (47%), Gaps = 63/394 (15%) |
Tair |
Show Blast
|
| AT4G24740.1 |
| Symbols: AME1, AFC2 | AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); kinase | chr4:12754739-12757663 REVERSE
Evalue: 2e-35 | Bitscore: 147
Identities = 110/400 (27%), Positives = 170/400 (42%), Gaps = 96/400 (24%) |
Tair |
Show Blast
|
| AT4G24740.2 |
| Symbols: AME1, AFC2 | AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); kinase | chr4:12754739-12756559 REVERSE
Evalue: 4e-35 | Bitscore: 145
Identities = 108/393 (27%), Positives = 167/393 (42%), Gaps = 96/393 (24%) |
Tair |
Show Blast
|
| AT4G32660.1 |
| Symbols: AME3 | AME3; kinase | chr4:15756401-15759112 FORWARD
Evalue: 7e-34 | Bitscore: 141
Identities = 120/440 (27%), Positives = 186/440 (42%), Gaps = 100/440 (22%) |
Tair |
Show Blast
|
| AT4G32660.3 |
| Symbols: AME3 | AME3; kinase | chr4:15756425-15759112 FORWARD
Evalue: 9e-34 | Bitscore: 141
Identities = 120/440 (27%), Positives = 186/440 (42%), Gaps = 100/440 (22%) |
Tair |
Show Blast
|
| AT3G25840.2 |
| Symbols: | protein kinase family protein | chr3:9454230-9457559 REVERSE
Evalue: 3e-33 | Bitscore: 139
Identities = 116/390 (29%), Positives = 177/390 (45%), Gaps = 78/390 (20%) |
Tair |
Show Blast
|
| AT3G53640.1 |
| Symbols: | protein kinase family protein | chr3:19897985-19899913 REVERSE
Evalue: 7e-33 | Bitscore: 138
Identities = 117/393 (29%), Positives = 182/393 (46%), Gaps = 83/393 (21%) |
Tair |
Show Blast
|
| AT1G13350.1 |
| Symbols: | protein kinase family protein | chr1:4572499-4576544 REVERSE
Evalue: 1e-32 | Bitscore: 137
Identities = 120/393 (30%), Positives = 184/393 (46%), Gaps = 83/393 (21%) |
Tair |
Show Blast
|
| AT3G25840.1 |
| Symbols: | protein kinase family protein | chr3:9454230-9458683 REVERSE
Evalue: 3e-32 | Bitscore: 136
Identities = 116/390 (29%), Positives = 177/390 (45%), Gaps = 78/390 (20%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
