- Gene ID
- Ot16g02030
- Locus
- Ot16g02030
- Functional Description
- unnamed product
- Gene Type
- protein-coding gene
- Contig
- chrom16
- Last Modified On
- 09 March 2010 13h36
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- unnamed product
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
ATP binding
2.
kinase activity
- Biological Process
-
1.
phosphorylation
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR004424 |
4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
InterPro |
|
PTHR20861 |
HOMOSERINE/4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE |
HMMPanther |
|
IPR020568 |
Ribosomal protein S5 domain 2-type fold |
InterPro |
|
IPR006204 |
GHMP kinase |
InterPro |
|
IPR014721 |
Ribosomal protein S5 domain 2-type fold, subgroup |
InterPro |
|
IPR013750 |
GHMP kinase, C-terminal |
InterPro |
|
SSF55060 |
GHMP Kinase, C-terminal domain |
superfamily |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL58202.1 |
putative isopentenyl monophosphat (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 657
Identities = 351/351 (100%), Positives = 351/351 (100%), Gaps = 0/351 (0%) |
NCBI |
Show Blast
|
| XP_001421612.1 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, putative chloroplast precursor (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
Evalue: 6e-130 | Bitscore: 468
Identities = 247/285 (86%), Positives = 263/285 (92%), Gaps = 0/285 (0%) |
NCBI |
Show Blast
|
| EEH52454.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 9e-106 | Bitscore: 387
Identities = 208/293 (70%), Positives = 241/293 (82%), Gaps = 0/293 (0%) |
NCBI |
Show Blast
|
| XP_002506332.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 3e-105 | Bitscore: 386
Identities = 204/290 (70%), Positives = 239/290 (82%), Gaps = 1/290 (0%) |
NCBI |
Show Blast
|
| ACU20904.1 |
unknown [Glycine max]
Evalue: 3e-82 | Bitscore: 309
Identities = 168/288 (58%), Positives = 210/288 (72%), Gaps = 3/288 (1%) |
NCBI |
Show Blast
|
| NP_001044544.1 |
Os01g0802100 [Oryza sativa (japonica cultivar-group)]
Evalue: 1e-81 | Bitscore: 307
Identities = 174/302 (57%), Positives = 208/302 (68%), Gaps = 3/302 (0%) |
NCBI |
Show Blast
|
| XP_002456497.1 |
hypothetical protein SORBIDRAFT_03g037310 [Sorghum bicolor]
Evalue: 1e-81 | Bitscore: 307
Identities = 171/295 (57%), Positives = 209/295 (70%), Gaps = 3/295 (1%) |
NCBI |
Show Blast
|
| XP_001772320.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 1e-81 | Bitscore: 307
Identities = 167/295 (56%), Positives = 212/295 (71%), Gaps = 4/295 (1%) |
NCBI |
Show Blast
|
| EAY76173.1 |
hypothetical protein OsI_04105 [Oryza sativa Indica Group]
Evalue: 2e-81 | Bitscore: 306
Identities = 174/302 (57%), Positives = 207/302 (68%), Gaps = 3/302 (0%) |
NCBI |
Show Blast
|
| XP_001694876.1 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Chlamydomonas reinhardtii]
Evalue: 3e-81 | Bitscore: 305
Identities = 188/292 (64%), Positives = 223/292 (76%), Gaps = 7/292 (2%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAJ28220.1 |
unknown [environmental sequence]
Evalue: 5e-21 | Bitscore: 101
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 4/183 (2%) |
GOS |
Show Blast
|
| EAG76541.1 |
unknown [environmental sequence]
Evalue: 1e-20 | Bitscore: 100
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 4/181 (2%) |
GOS |
Show Blast
|
| EAE56207.1 |
unknown [environmental sequence]
Evalue: 1e-20 | Bitscore: 100
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 7/192 (3%) |
GOS |
Show Blast
|
| EAK32912.1 |
unknown [environmental sequence]
Evalue: 5e-20 | Bitscore: 98
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 7/192 (3%) |
GOS |
Show Blast
|
| EAI68259.1 |
unknown [environmental sequence]
Evalue: 1e-19 | Bitscore: 97
Identities = 63/184 (34%), Positives = 92/184 (50%), Gaps = 6/184 (3%) |
GOS |
Show Blast
|
| EAJ34642.1 |
unknown [environmental sequence]
Evalue: 5e-19 | Bitscore: 94
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 11/195 (5%) |
GOS |
Show Blast
|
| EAH62255.1 |
unknown [environmental sequence]
Evalue: 1e-18 | Bitscore: 93
Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 6/173 (3%) |
GOS |
Show Blast
|
| EAJ55064.1 |
unknown [environmental sequence]
Evalue: 2e-18 | Bitscore: 93
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 6/177 (3%) |
GOS |
Show Blast
|
| EAH92266.1 |
unknown [environmental sequence]
Evalue: 6e-18 | Bitscore: 91
Identities = 61/186 (32%), Positives = 95/186 (51%), Gaps = 10/186 (5%) |
GOS |
Show Blast
|
| EAJ36217.1 |
unknown [environmental sequence]
Evalue: 2e-17 | Bitscore: 89
Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 9/221 (4%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL58202.1 |
putative isopentenyl monophosphat (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 657
Identities = 351/351 (100%), Positives = 351/351 (100%), Gaps = 0/351 (0%) |
NCBI |
Show Blast
|
| XP_001421612.1 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, putative chloroplast precursor (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
Evalue: 6e-130 | Bitscore: 468
Identities = 247/285 (86%), Positives = 263/285 (92%), Gaps = 0/285 (0%) |
NCBI |
Show Blast
|
| EEH52454.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 9e-106 | Bitscore: 387
Identities = 208/293 (70%), Positives = 241/293 (82%), Gaps = 0/293 (0%) |
NCBI |
Show Blast
|
| XP_002506332.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 3e-105 | Bitscore: 386
Identities = 204/290 (70%), Positives = 239/290 (82%), Gaps = 1/290 (0%) |
NCBI |
Show Blast
|
| ACU20904.1 |
unknown [Glycine max]
Evalue: 3e-82 | Bitscore: 309
Identities = 168/288 (58%), Positives = 210/288 (72%), Gaps = 3/288 (1%) |
NCBI |
Show Blast
|
| NP_001044544.1 |
Os01g0802100 [Oryza sativa (japonica cultivar-group)]
Evalue: 1e-81 | Bitscore: 307
Identities = 174/302 (57%), Positives = 208/302 (68%), Gaps = 3/302 (0%) |
NCBI |
Show Blast
|
| XP_002456497.1 |
hypothetical protein SORBIDRAFT_03g037310 [Sorghum bicolor]
Evalue: 1e-81 | Bitscore: 307
Identities = 171/295 (57%), Positives = 209/295 (70%), Gaps = 3/295 (1%) |
NCBI |
Show Blast
|
| XP_001772320.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 1e-81 | Bitscore: 307
Identities = 167/295 (56%), Positives = 212/295 (71%), Gaps = 4/295 (1%) |
NCBI |
Show Blast
|
| EAY76173.1 |
hypothetical protein OsI_04105 [Oryza sativa Indica Group]
Evalue: 2e-81 | Bitscore: 306
Identities = 174/302 (57%), Positives = 207/302 (68%), Gaps = 3/302 (0%) |
NCBI |
Show Blast
|
| XP_001694876.1 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Chlamydomonas reinhardtii]
Evalue: 3e-81 | Bitscore: 305
Identities = 188/292 (64%), Positives = 223/292 (76%), Gaps = 7/292 (2%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| P93841 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic (Fragment) OS=Solanum
Evalue: 5e-80 | Bitscore: 298
Identities = 151/295 (51%), Positives = 191/295 (64%), Gaps = 3/295 (1%) |
SwissP |
Show Blast
|
| P56848 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Mentha piperita GN=ISPE PE=1 SV=1
Evalue: 6e-76 | Bitscore: 284
Identities = 147/299 (49%), Positives = 191/299 (63%), Gaps = 3/299 (1%) |
SwissP |
Show Blast
|
| O81014 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Arabidopsis thaliana GN=ISPE PE=2 SV=1
Evalue: 4e-73 | Bitscore: 275
Identities = 146/288 (50%), Positives = 187/288 (64%), Gaps = 3/288 (1%) |
SwissP |
Show Blast
|
| Q6MAT6 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Protochlamydia amoebophila (strain UWE25) GN=ispE PE=3 SV=1
Evalue: 2e-53 | Bitscore: 210
Identities = 120/286 (41%), Positives = 159/286 (55%), Gaps = 21/286 (7%) |
SwissP |
Show Blast
|
| Q5QV06 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Idiomarina loihiensis GN=ispE PE=3 SV=1
Evalue: 7e-22 | Bitscore: 105
Identities = 72/198 (36%), Positives = 102/198 (51%), Gaps = 13/198 (6%) |
SwissP |
Show Blast
|
| A4SK61 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Aeromonas salmonicida (strain A449) GN=ispE PE=3 SV=1
Evalue: 2e-21 | Bitscore: 103
Identities = 66/183 (36%), Positives = 95/183 (51%), Gaps = 4/183 (2%) |
SwissP |
Show Blast
|
| Q5WLV8 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus clausii (strain KSM-K16) GN=ispE PE=3 SV=1
Evalue: 4e-21 | Bitscore: 102
Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 8/252 (3%) |
SwissP |
Show Blast
|
| A0KN01 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
Evalue: 4e-21 | Bitscore: 102
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 4/183 (2%) |
SwissP |
Show Blast
|
| A7GJV7 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=ispE PE=3
Evalue: 4e-21 | Bitscore: 102
Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 10/253 (3%) |
SwissP |
Show Blast
|
| Q9KGK0 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus halodurans GN=ispE PE=3 SV=1
Evalue: 7e-21 | Bitscore: 101
Identities = 79/256 (30%), Positives = 117/256 (45%), Gaps = 16/256 (6%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT2G26930.1 |
| Symbols: PDE277, ISPE, ATCDPMEK | ATCDPMEK (PIGMENT DEFECTIVE 277); 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
Evalue: 3e-74 | Bitscore: 275
Identities = 146/288 (50%), Positives = 187/288 (64%), Gaps = 3/288 (1%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
