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Ostreococcus tauri


Gene ID
Ot16g01770
Locus
Ot16g01770
Functional Description
6-phosphogluconolactonase - like protein (ISS)
Gene Type
protein-coding gene
Contig
chrom16
Last Modified On
09 March 2010 13h32
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
6-phosphogluconolactonase - like protein (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
6-phosphogluconolactonase activity

Biological Process
1.
pentose-phosphate shunt

Protein Domains 


Domain IDDescriptionDatabase
SSF100950 NagB/RpiA/CoA transferase-like superfamily
G3DSA:3.40.50.1360 no description Gene3D
IPR005900 6-phosphogluconolactonase InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL58176.1 6-phosphogluconolactonase-like protein (ISS) [Ostreococcus tauri]
Evalue: 4e-140 | Bitscore: 501
Identities = 255/255 (100%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
NCBI
Show Blast
XP_001421751.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 5e-103 | Bitscore: 377
Identities = 183/244 (75%), Positives = 204/244 (83%), Gaps = 0/244 (0%)
NCBI
Show Blast
EEH57644.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-77 | Bitscore: 292
Identities = 142/243 (58%), Positives = 183/243 (75%), Gaps = 2/243 (0%)
NCBI
Show Blast
XP_002508195.1 predicted protein [Micromonas sp. RCC299]
Evalue: 5e-74 | Bitscore: 281
Identities = 137/233 (58%), Positives = 174/233 (74%), Gaps = 2/233 (0%)
NCBI
Show Blast
EAD21131.1 unknown [environmental sequence]
Evalue: 4e-52 | Bitscore: 204
Identities = 100/171 (58%), Positives = 128/171 (74%), Gaps = 2/171 (1%)
GOS
Show Blast
XP_001751464.1 predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-50 | Bitscore: 202
Identities = 111/246 (45%), Positives = 150/246 (60%), Gaps = 11/246 (4%)
NCBI
Show Blast
ACO09969.1 6-phosphogluconolactonase [Osmerus mordax]
Evalue: 3e-46 | Bitscore: 189
Identities = 106/237 (44%), Positives = 145/237 (61%), Gaps = 20/237 (8%)
NCBI
Show Blast
XP_002173062.1 6-phosphogluconolactonase [Schizosaccharomyces japonicus yFS275]
Evalue: 3e-44 | Bitscore: 182
Identities = 100/245 (40%), Positives = 140/245 (57%), Gaps = 9/245 (3%)
NCBI
Show Blast
CAG12169.1 unnamed protein product [Tetraodon nigroviridis]
Evalue: 8e-43 | Bitscore: 177
Identities = 99/236 (41%), Positives = 138/236 (58%), Gaps = 16/236 (6%)
NCBI
Show Blast
ACO13366.1 6-phosphogluconolactonase [Esox lucius]
Evalue: 3e-42 | Bitscore: 176
Identities = 97/237 (40%), Positives = 141/237 (59%), Gaps = 20/237 (8%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

CDS  

Locus ID
Ot16g01770
Redo Blast
CDS Length
768 nucleotides
CDS Sequence

Protein 

Locus ID
Ot16g01770
Redo Blast
Protein Length
256 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

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EST IDAAH06594.1 Support ModelY More Info
EST IDOtEST03246 Support ModelY More Info