- Gene ID
- Ot15g01280
- Locus
- Ot15g01280
- Functional Description
- unnamed product
- Gene Type
- protein-coding gene
- Contig
- chrom15
- Last Modified On
- 09 March 2010 12h36
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- unnamed product
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL57547.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1125
Identities = 641/641 (100%), Positives = 641/641 (100%), Gaps = 0/641 (0%) |
NCBI |
Show Blast
|
| XP_001419269.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 682
Identities = 407/660 (61%), Positives = 502/660 (76%), Gaps = 35/660 (5%) |
NCBI |
Show Blast
|
| ZP_03157793.1 |
magnesium chelatase ATPase subunit D [Cyanothece sp. PCC 7822]
Evalue: 2e-103 | Bitscore: 381
Identities = 259/681 (38%), Positives = 375/681 (55%), Gaps = 73/681 (10%) |
NCBI |
Show Blast
|
| XP_002274874.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 8e-98 | Bitscore: 362
Identities = 261/674 (38%), Positives = 377/674 (55%), Gaps = 58/674 (8%) |
NCBI |
Show Blast
|
| O22437 |
Magnesium-chelatase subunit chlD, chloroplastic OS=Pisum sativum GN=CHLD PE=2 SV=1
Evalue: 7e-97 | Bitscore: 355
Identities = 240/675 (35%), Positives = 350/675 (51%), Gaps = 56/675 (8%) |
SwissP |
Show Blast
|
| P72772 |
Magnesium-chelatase subunit chlD OS=Synechocystis sp. (strain PCC 6803) GN=chlD PE=3 SV=1
Evalue: 8e-97 | Bitscore: 355
Identities = 237/687 (34%), Positives = 344/687 (50%), Gaps = 76/687 (11%) |
SwissP |
Show Blast
|
| O07345 |
Magnesium-chelatase subunit chlD OS=Synechococcus elongatus (strain PCC 7942) GN=chlD PE=3 SV=2
Evalue: 2e-96 | Bitscore: 353
Identities = 237/693 (34%), Positives = 353/693 (50%), Gaps = 87/693 (12%) |
SwissP |
Show Blast
|
| O24133 |
Magnesium-chelatase subunit chlD, chloroplastic OS=Nicotiana tabacum GN=CHLD PE=2 SV=1
Evalue: 2e-96 | Bitscore: 353
Identities = 241/679 (35%), Positives = 349/679 (51%), Gaps = 63/679 (9%) |
SwissP |
Show Blast
|
| Ot05g05120 |
chrom05.0001 [803641..805911]
Evalue: 8e-97 | Bitscore: 349
Identities = 242/672 (36%), Positives = 338/672 (50%), Gaps = 58/672 (8%) |
Self |
Show Blast
|
| CBI17197.1 |
unnamed protein product [Vitis vinifera]
Evalue: 1e-93 | Bitscore: 348
Identities = 239/576 (41%), Positives = 343/576 (59%), Gaps = 16/576 (2%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAJ91950.1 |
unknown [environmental sequence]
Evalue: 2e-87 | Bitscore: 323
Identities = 208/565 (36%), Positives = 293/565 (51%), Gaps = 26/565 (4%) |
GOS |
Show Blast
|
| EAK13560.1 |
unknown [environmental sequence]
Evalue: 2e-86 | Bitscore: 320
Identities = 207/562 (36%), Positives = 293/562 (52%), Gaps = 28/562 (4%) |
GOS |
Show Blast
|
| EAK68478.1 |
unknown [environmental sequence]
Evalue: 8e-81 | Bitscore: 301
Identities = 192/507 (37%), Positives = 269/507 (53%), Gaps = 21/507 (4%) |
GOS |
Show Blast
|
| EAJ37553.1 |
unknown [environmental sequence]
Evalue: 2e-72 | Bitscore: 273
Identities = 189/522 (36%), Positives = 262/522 (50%), Gaps = 24/522 (4%) |
GOS |
Show Blast
|
| EAI07709.1 |
unknown [environmental sequence]
Evalue: 6e-69 | Bitscore: 261
Identities = 174/509 (34%), Positives = 258/509 (50%), Gaps = 48/509 (9%) |
GOS |
Show Blast
|
| EAI41159.1 |
unknown [environmental sequence]
Evalue: 1e-58 | Bitscore: 227
Identities = 170/490 (34%), Positives = 235/490 (47%), Gaps = 26/490 (5%) |
GOS |
Show Blast
|
| EAI40390.1 |
unknown [environmental sequence]
Evalue: 1e-54 | Bitscore: 214
Identities = 157/445 (35%), Positives = 214/445 (48%), Gaps = 39/445 (8%) |
GOS |
Show Blast
|
| EAJ90311.1 |
unknown [environmental sequence]
Evalue: 1e-47 | Bitscore: 190
Identities = 121/267 (45%), Positives = 153/267 (57%), Gaps = 14/267 (5%) |
GOS |
Show Blast
|
| EAJ66553.1 |
unknown [environmental sequence]
Evalue: 8e-47 | Bitscore: 188
Identities = 126/273 (46%), Positives = 159/273 (58%), Gaps = 21/273 (7%) |
GOS |
Show Blast
|
| EAG57820.1 |
unknown [environmental sequence]
Evalue: 3e-46 | Bitscore: 186
Identities = 116/271 (42%), Positives = 152/271 (56%), Gaps = 12/271 (4%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL57547.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1125
Identities = 641/641 (100%), Positives = 641/641 (100%), Gaps = 0/641 (0%) |
NCBI |
Show Blast
|
| XP_001419269.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 682
Identities = 407/660 (61%), Positives = 502/660 (76%), Gaps = 35/660 (5%) |
NCBI |
Show Blast
|
| ZP_03157793.1 |
magnesium chelatase ATPase subunit D [Cyanothece sp. PCC 7822]
Evalue: 2e-103 | Bitscore: 381
Identities = 259/681 (38%), Positives = 375/681 (55%), Gaps = 73/681 (10%) |
NCBI |
Show Blast
|
| O22437 |
RecName: Full=Magnesium-chelatase subunit chlD, chloroplastic; Short=Mg-chelatase subunit D; AltName: Full=Mg-protoporphyrin
Evalue: 3e-99 | Bitscore: 367
Identities = 262/675 (38%), Positives = 391/675 (57%), Gaps = 56/675 (8%) |
NCBI |
Show Blast
|
| O24133 |
RecName: Full=Magnesium-chelatase subunit chlD, chloroplastic; Short=Mg-chelatase subunit D; AltName: Full=Mg-protoporphyrin
Evalue: 4e-99 | Bitscore: 366
Identities = 266/684 (38%), Positives = 389/684 (56%), Gaps = 73/684 (10%) |
NCBI |
Show Blast
|
| XP_002274874.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 8e-98 | Bitscore: 362
Identities = 261/674 (38%), Positives = 377/674 (55%), Gaps = 58/674 (8%) |
NCBI |
Show Blast
|
| CBI17197.1 |
unnamed protein product [Vitis vinifera]
Evalue: 1e-93 | Bitscore: 348
Identities = 239/576 (41%), Positives = 343/576 (59%), Gaps = 16/576 (2%) |
NCBI |
Show Blast
|
| XP_001700902.1 |
magnesium chelatase subunit D [Chlamydomonas reinhardtii]
Evalue: 3e-51 | Bitscore: 207
Identities = 121/269 (44%), Positives = 170/269 (63%), Gaps = 12/269 (4%) |
NCBI |
Show Blast
|
| XP_002314091.1 |
predicted protein [Populus trichocarpa]
Evalue: 4e-51 | Bitscore: 207
Identities = 130/284 (45%), Positives = 182/284 (64%), Gaps = 15/284 (5%) |
NCBI |
Show Blast
|
| YP_001514899.1 |
magnesium protoporphyrin IX chelatase, D subunit [Acaryochloris marina MBIC11017]
Evalue: 2e-50 | Bitscore: 204
Identities = 133/276 (48%), Positives = 169/276 (61%), Gaps = 17/276 (6%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot05g05120 |
chrom05.0001 [803641..805911]
Evalue: 8e-97 | Bitscore: 349
Identities = 242/672 (36%), Positives = 338/672 (50%), Gaps = 58/672 (8%) |
Self |
Show Blast
|
| Ot02g04440 |
chrom02.0001 [480712..480760,481113..482221] inframe stop codon incomplete
Evalue: 2e-35 | Bitscore: 145
Identities = 99/320 (30%), Positives = 157/320 (49%), Gaps = 40/320 (12%) |
Self |
Show Blast
|
| Ot01g05570 |
chrom01.0001 [913378..914493] incomplete
Evalue: 1e-32 | Bitscore: 136
Identities = 89/319 (27%), Positives = 147/319 (46%), Gaps = 40/319 (12%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| O22437 |
Magnesium-chelatase subunit chlD, chloroplastic OS=Pisum sativum GN=CHLD PE=2 SV=1
Evalue: 7e-97 | Bitscore: 355
Identities = 240/675 (35%), Positives = 350/675 (51%), Gaps = 56/675 (8%) |
SwissP |
Show Blast
|
| P72772 |
Magnesium-chelatase subunit chlD OS=Synechocystis sp. (strain PCC 6803) GN=chlD PE=3 SV=1
Evalue: 8e-97 | Bitscore: 355
Identities = 237/687 (34%), Positives = 344/687 (50%), Gaps = 76/687 (11%) |
SwissP |
Show Blast
|
| O07345 |
Magnesium-chelatase subunit chlD OS=Synechococcus elongatus (strain PCC 7942) GN=chlD PE=3 SV=2
Evalue: 2e-96 | Bitscore: 353
Identities = 237/693 (34%), Positives = 353/693 (50%), Gaps = 87/693 (12%) |
SwissP |
Show Blast
|
| O24133 |
Magnesium-chelatase subunit chlD, chloroplastic OS=Nicotiana tabacum GN=CHLD PE=2 SV=1
Evalue: 2e-96 | Bitscore: 353
Identities = 241/679 (35%), Positives = 349/679 (51%), Gaps = 63/679 (9%) |
SwissP |
Show Blast
|
| Q9SJE1 |
Magnesium-chelatase subunit chlD, chloroplastic OS=Arabidopsis thaliana GN=CHLD PE=2 SV=3
Evalue: 2e-94 | Bitscore: 347
Identities = 238/678 (35%), Positives = 344/678 (50%), Gaps = 62/678 (9%) |
SwissP |
Show Blast
|
| Q9ZGE6 |
Magnesium-chelatase 67 kDa subunit OS=Heliobacillus mobilis GN=bchD PE=3 SV=1
Evalue: 5e-78 | Bitscore: 292
Identities = 212/682 (31%), Positives = 313/682 (45%), Gaps = 73/682 (10%) |
SwissP |
Show Blast
|
| O50313 |
Magnesium-chelatase 67 kDa subunit OS=Chlorobaculum parvum (strain NCIB 8327) GN=bchD PE=3 SV=1
Evalue: 1e-69 | Bitscore: 264
Identities = 204/638 (31%), Positives = 306/638 (47%), Gaps = 37/638 (5%) |
SwissP |
Show Blast
|
| Q93SW0 |
Magnesium-chelatase 67 kDa subunit OS=Chlorobium tepidum GN=bchD PE=3 SV=1
Evalue: 6e-69 | Bitscore: 262
Identities = 203/640 (31%), Positives = 311/640 (48%), Gaps = 40/640 (6%) |
SwissP |
Show Blast
|
| Q32742 |
Magnesium-chelatase subunit chlI OS=Olisthodiscus luteus GN=chlI PE=3 SV=1
Evalue: 8e-37 | Bitscore: 155
Identities = 93/309 (30%), Positives = 157/309 (50%), Gaps = 26/309 (8%) |
SwissP |
Show Blast
|
| P51394 |
Magnesium-chelatase subunit chlI OS=Porphyra purpurea GN=chlI PE=3 SV=1
Evalue: 1e-34 | Bitscore: 148
Identities = 96/320 (30%), Positives = 154/320 (48%), Gaps = 40/320 (12%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT1G08520.1 |
| Symbols: PDE166, CHLD | CHLD/PDE166 (PIGMENT DEFECTIVE 166); magnesium chelatase/ nucleoside-triphosphatase/
Evalue: 2e-95 | Bitscore: 347
Identities = 238/678 (35%), Positives = 344/678 (50%), Gaps = 62/678 (9%) |
Tair |
Show Blast
|
| AT5G45930.1 |
| Symbols: CHL I2, CHLI-2, CHLI2 | CHLI2; magnesium chelatase | chr5:18645322-18646792 FORWARD
Evalue: 2e-32 | Bitscore: 137
Identities = 88/282 (31%), Positives = 142/282 (50%), Gaps = 40/282 (14%) |
Tair |
Show Blast
|
| AT4G18480.1 |
| Symbols: CH42, CH-42, CHL11, CHLI-1, CHLI1 | CHLI1 (CHLORINA 42); magnesium chelatase | chr4:10201908-10203372 REVERSE
Evalue: 2e-31 | Bitscore: 134
Identities = 89/282 (31%), Positives = 138/282 (48%), Gaps = 40/282 (14%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
