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Ostreococcus tauri


Gene ID
Ot15g00410
Locus
Ot15g00410
Functional Description
OJ000223_09.4 [Oryza sativa (ISS)
Gene Type
protein-coding gene
Contig
chrom15
Last Modified On
09 March 2010 12h20
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
OJ000223_09.4 [Oryza sativa (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
catalytic activity

2.
iron ion binding

Biological Process
n/a

Protein Domains 


Domain IDDescriptionDatabase
SSF102114 Radical SAM enzymes superfamily
IPR000182 GCN5-related N-acetyltransferase InterPro
IPR006638 Elongator protein 3/MiaB/NifB InterPro
IPR005910 Histone acetyltransferase ELP3 InterPro
IPR007197 Radical SAM InterPro
IPR016181 Acyl-CoA N-acyltransferase InterPro
PTHR11135 HISTONE ACETYLTRANSFERASE-RELATED HMMPanther

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL57459.1 OJ000223_09.4 [Oryza sativa (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1106
Identities = 554/554 (100%), Positives = 554/554 (100%), Gaps = 0/554 (0%)
NCBI
Show Blast
XP_001421200.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1027
Identities = 492/517 (95%), Positives = 508/517 (98%), Gaps = 1/517 (0%)
NCBI
Show Blast
XP_002506816.1 histone acetyltransferase [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 944
Identities = 446/521 (85%), Positives = 486/521 (93%), Gaps = 0/521 (0%)
NCBI
Show Blast
EEH54705.1 histone acetyltransferase [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 910
Identities = 449/521 (86%), Positives = 485/521 (93%), Gaps = 1/521 (0%)
NCBI
Show Blast
XP_002322225.1 histone acetyltransferase [Populus trichocarpa]
Evalue: 0.0 | Bitscore: 875
Identities = 413/521 (79%), Positives = 461/521 (88%), Gaps = 2/521 (0%)
NCBI
Show Blast
XP_002318107.1 histone acetyltransferase [Populus trichocarpa]
Evalue: 0.0 | Bitscore: 870
Identities = 411/518 (79%), Positives = 458/518 (88%), Gaps = 2/518 (0%)
NCBI
Show Blast
XP_002448077.1 hypothetical protein SORBIDRAFT_06g020610 [Sorghum bicolor]
Evalue: 0.0 | Bitscore: 869
Identities = 413/524 (78%), Positives = 461/524 (87%), Gaps = 2/524 (0%)
NCBI
Show Blast
NP_001136699.1 hypothetical protein LOC100216833 [Zea mays]
Evalue: 0.0 | Bitscore: 868
Identities = 413/524 (78%), Positives = 461/524 (87%), Gaps = 2/524 (0%)
NCBI
Show Blast
ADB92637.1 putative histone acetyltransferase ELP3 [Hordeum vulgare]
Evalue: 0.0 | Bitscore: 868
Identities = 411/518 (79%), Positives = 458/518 (88%), Gaps = 2/518 (0%)
NCBI
Show Blast
XP_001775054.1 RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 867
Identities = 415/520 (79%), Positives = 459/520 (88%), Gaps = 4/520 (0%)
NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
Ot15g00410
Redo Blast
CDS Length
1665 nucleotides
CDS Sequence

Protein 

Locus ID
Ot15g00410
Redo Blast
Protein Length
555 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a