- Gene ID
- Ot15g00410
- Locus
- Ot15g00410
- Functional Description
- OJ000223_09.4 [Oryza sativa (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom15
- Last Modified On
- 09 March 2010 12h20
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- OJ000223_09.4 [Oryza sativa (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
catalytic activity
2.
iron ion binding
- Biological Process
-
n/a
Protein Domains
Domain ID | Description | Database |
SSF102114 |
Radical SAM enzymes |
superfamily |
IPR000182 |
GCN5-related N-acetyltransferase |
InterPro |
IPR006638 |
Elongator protein 3/MiaB/NifB |
InterPro |
IPR005910 |
Histone acetyltransferase ELP3 |
InterPro |
IPR007197 |
Radical SAM |
InterPro |
IPR016181 |
Acyl-CoA N-acyltransferase |
InterPro |
PTHR11135 |
HISTONE ACETYLTRANSFERASE-RELATED |
HMMPanther |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
CAL57459.1 |
OJ000223_09.4 [Oryza sativa (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1106 Identities = 554/554 (100%), Positives = 554/554 (100%), Gaps = 0/554 (0%) |
NCBI |
Show Blast
|
XP_001421200.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1027 Identities = 492/517 (95%), Positives = 508/517 (98%), Gaps = 1/517 (0%) |
NCBI |
Show Blast
|
XP_002506816.1 |
histone acetyltransferase [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 944 Identities = 446/521 (85%), Positives = 486/521 (93%), Gaps = 0/521 (0%) |
NCBI |
Show Blast
|
EEH54705.1 |
histone acetyltransferase [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 910 Identities = 449/521 (86%), Positives = 485/521 (93%), Gaps = 1/521 (0%) |
NCBI |
Show Blast
|
XP_002322225.1 |
histone acetyltransferase [Populus trichocarpa]
Evalue: 0.0 | Bitscore: 875 Identities = 413/521 (79%), Positives = 461/521 (88%), Gaps = 2/521 (0%) |
NCBI |
Show Blast
|
XP_002318107.1 |
histone acetyltransferase [Populus trichocarpa]
Evalue: 0.0 | Bitscore: 870 Identities = 411/518 (79%), Positives = 458/518 (88%), Gaps = 2/518 (0%) |
NCBI |
Show Blast
|
XP_002448077.1 |
hypothetical protein SORBIDRAFT_06g020610 [Sorghum bicolor]
Evalue: 0.0 | Bitscore: 869 Identities = 413/524 (78%), Positives = 461/524 (87%), Gaps = 2/524 (0%) |
NCBI |
Show Blast
|
NP_001136699.1 |
hypothetical protein LOC100216833 [Zea mays]
Evalue: 0.0 | Bitscore: 868 Identities = 413/524 (78%), Positives = 461/524 (87%), Gaps = 2/524 (0%) |
NCBI |
Show Blast
|
ADB92637.1 |
putative histone acetyltransferase ELP3 [Hordeum vulgare]
Evalue: 0.0 | Bitscore: 868 Identities = 411/518 (79%), Positives = 458/518 (88%), Gaps = 2/518 (0%) |
NCBI |
Show Blast
|
XP_001775054.1 |
RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 867 Identities = 415/520 (79%), Positives = 459/520 (88%), Gaps = 4/520 (0%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
EAD52595.1 |
unknown [environmental sequence]
Evalue: 1e-176 | Bitscore: 618 Identities = 299/305 (98%), Positives = 302/305 (99%) |
GOS |
Show Blast
|
EAE15215.1 |
unknown [environmental sequence]
Evalue: 1e-134 | Bitscore: 479 Identities = 233/271 (85%), Positives = 254/271 (93%) |
GOS |
Show Blast
|
EAD26401.1 |
unknown [environmental sequence]
Evalue: 1e-127 | Bitscore: 454 Identities = 213/237 (89%), Positives = 228/237 (96%) |
GOS |
Show Blast
|
EAI66668.1 |
unknown [environmental sequence]
Evalue: 1e-118 | Bitscore: 425 Identities = 217/513 (42%), Positives = 320/513 (62%), Gaps = 17/513 (3%) |
GOS |
Show Blast
|
EAF36860.1 |
unknown [environmental sequence]
Evalue: 6e-79 | Bitscore: 294 Identities = 137/320 (42%), Positives = 209/320 (65%), Gaps = 8/320 (2%) |
GOS |
Show Blast
|
EAB27975.1 |
unknown [environmental sequence]
Evalue: 5e-56 | Bitscore: 218 Identities = 116/291 (39%), Positives = 170/291 (58%), Gaps = 11/291 (3%) |
GOS |
Show Blast
|
EAE80163.1 |
unknown [environmental sequence]
Evalue: 3e-44 | Bitscore: 179 Identities = 87/212 (41%), Positives = 134/212 (63%), Gaps = 11/212 (5%) |
GOS |
Show Blast
|
EAI53802.1 |
unknown [environmental sequence]
Evalue: 4e-42 | Bitscore: 172 Identities = 94/221 (42%), Positives = 135/221 (61%), Gaps = 6/221 (2%) |
GOS |
Show Blast
|
EAE85080.1 |
unknown [environmental sequence]
Evalue: 2e-41 | Bitscore: 170 Identities = 95/309 (30%), Positives = 160/309 (51%), Gaps = 13/309 (4%) |
GOS |
Show Blast
|
EAH22624.1 |
unknown [environmental sequence]
Evalue: 1e-36 | Bitscore: 154 Identities = 82/242 (33%), Positives = 130/242 (53%), Gaps = 11/242 (4%) |
GOS |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
CAL57459.1 |
OJ000223_09.4 [Oryza sativa (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1106 Identities = 554/554 (100%), Positives = 554/554 (100%), Gaps = 0/554 (0%) |
NCBI |
Show Blast
|
XP_001421200.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1027 Identities = 492/517 (95%), Positives = 508/517 (98%), Gaps = 1/517 (0%) |
NCBI |
Show Blast
|
XP_002506816.1 |
histone acetyltransferase [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 944 Identities = 446/521 (85%), Positives = 486/521 (93%), Gaps = 0/521 (0%) |
NCBI |
Show Blast
|
EEH54705.1 |
histone acetyltransferase [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 910 Identities = 449/521 (86%), Positives = 485/521 (93%), Gaps = 1/521 (0%) |
NCBI |
Show Blast
|
XP_002322225.1 |
histone acetyltransferase [Populus trichocarpa]
Evalue: 0.0 | Bitscore: 875 Identities = 413/521 (79%), Positives = 461/521 (88%), Gaps = 2/521 (0%) |
NCBI |
Show Blast
|
XP_002318107.1 |
histone acetyltransferase [Populus trichocarpa]
Evalue: 0.0 | Bitscore: 870 Identities = 411/518 (79%), Positives = 458/518 (88%), Gaps = 2/518 (0%) |
NCBI |
Show Blast
|
XP_002448077.1 |
hypothetical protein SORBIDRAFT_06g020610 [Sorghum bicolor]
Evalue: 0.0 | Bitscore: 869 Identities = 413/524 (78%), Positives = 461/524 (87%), Gaps = 2/524 (0%) |
NCBI |
Show Blast
|
NP_001136699.1 |
hypothetical protein LOC100216833 [Zea mays]
Evalue: 0.0 | Bitscore: 868 Identities = 413/524 (78%), Positives = 461/524 (87%), Gaps = 2/524 (0%) |
NCBI |
Show Blast
|
ADB92637.1 |
putative histone acetyltransferase ELP3 [Hordeum vulgare]
Evalue: 0.0 | Bitscore: 868 Identities = 411/518 (79%), Positives = 458/518 (88%), Gaps = 2/518 (0%) |
NCBI |
Show Blast
|
XP_001775054.1 |
RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 867 Identities = 415/520 (79%), Positives = 459/520 (88%), Gaps = 4/520 (0%) |
NCBI |
Show Blast
|
No hits found against database O.RCC809 with an e-value better than 1e-3. |
No hits found against database O.luci with an e-value better than 1e-3. |
No hits found against database Self with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
Q93ZR1 |
Elongator complex protein 3 OS=Arabidopsis thaliana GN=HAG3 PE=1 SV=1
Evalue: 0.0 | Bitscore: 851 Identities = 408/520 (78%), Positives = 458/520 (88%), Gaps = 3/520 (0%) |
SwissP |
Show Blast
|
Q7X7L3 |
Elongator complex protein 3 OS=Oryza sativa subsp. japonica GN=ELP3 PE=2 SV=2
Evalue: 0.0 | Bitscore: 848 Identities = 410/518 (79%), Positives = 458/518 (88%), Gaps = 2/518 (0%) |
SwissP |
Show Blast
|
Q5ZHS1 |
Elongator complex protein 3 OS=Gallus gallus GN=ELP3 PE=2 SV=1
Evalue: 0.0 | Bitscore: 815 Identities = 386/521 (74%), Positives = 450/521 (86%), Gaps = 2/521 (0%) |
SwissP |
Show Blast
|
Q5HZM6 |
Elongator complex protein 3 OS=Xenopus laevis GN=elp3 PE=2 SV=1
Evalue: 0.0 | Bitscore: 810 Identities = 382/521 (73%), Positives = 447/521 (85%), Gaps = 2/521 (0%) |
SwissP |
Show Blast
|
Q5RIC0 |
Elongator complex protein 3 OS=Danio rerio GN=elp3 PE=2 SV=3
Evalue: 0.0 | Bitscore: 808 Identities = 384/521 (73%), Positives = 448/521 (85%), Gaps = 2/521 (0%) |
SwissP |
Show Blast
|
Q1ZXC6 |
Probable elongator complex protein 3 OS=Dictyostelium discoideum GN=elp3 PE=3 SV=1
Evalue: 0.0 | Bitscore: 798 Identities = 370/521 (71%), Positives = 448/521 (85%), Gaps = 2/521 (0%) |
SwissP |
Show Blast
|
Q6NVL5 |
Elongator complex protein 3 OS=Xenopus tropicalis GN=elp3 PE=2 SV=1
Evalue: 0.0 | Bitscore: 793 Identities = 385/521 (73%), Positives = 447/521 (85%), Gaps = 2/521 (0%) |
SwissP |
Show Blast
|
O14023 |
Probable elongator complex protein 3 OS=Schizosaccharomyces pombe GN=elp3 PE=2 SV=1
Evalue: 0.0 | Bitscore: 791 Identities = 372/519 (71%), Positives = 440/519 (84%), Gaps = 11/519 (2%) |
SwissP |
Show Blast
|
Q9VQZ6 |
Probable elongator complex protein 3 OS=Drosophila melanogaster GN=Elp3 PE=2 SV=1
Evalue: 0.0 | Bitscore: 787 Identities = 375/513 (73%), Positives = 445/513 (86%), Gaps = 2/513 (0%) |
SwissP |
Show Blast
|
Q9H9T3 |
Elongator complex protein 3 OS=Homo sapiens GN=ELP3 PE=1 SV=2
Evalue: 0.0 | Bitscore: 784 Identities = 375/521 (71%), Positives = 447/521 (85%), Gaps = 2/521 (0%) |
SwissP |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
AT5G50320.1 |
| Symbols: ELO3, HAG3, HAC8 | ELO3/HAC8/HAG3 (ELONGATA 3); N-acetyltransferase/ catalytic/ iron-sulfur cluster
Evalue: 0.0 | Bitscore: 851 Identities = 408/520 (78%), Positives = 458/520 (88%), Gaps = 3/520 (0%) |
Tair |
Show Blast
|
AT5G63290.1 |
| Symbols: | coproporphyrinogen oxidase-related | chr5:25386575-25388120 REVERSE
Evalue: 0.0007 | Bitscore: 42 Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 4/120 (3%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|