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Ostreococcus tauri


Gene ID
Ot15g00340
Locus
Ot15g00340
Functional Description
Serine/threonine specific protein phosphatase PP1, catalytic subunit (ISS)
Gene Type
protein-coding gene
Contig
chrom15
Last Modified On
09 March 2010 12h20
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
Serine/threonine specific protein phosphatase PP1, catalytic subunit (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
hydrolase activity

Biological Process
n/a

Protein Domains 


Domain IDDescriptionDatabase
IPR004843 Metallophosphoesterase InterPro
SSF56300 Metallo-dependent phosphatases superfamily
G3DSA:3.60.21.10 no description Gene3D
IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL57452.1 Serine/threonine specific protein phosphatase PP1, catalytic subunit (ISS) [Ostreococcus tauri]
Evalue: 1e-166 | Bitscore: 589
Identities = 285/285 (100%), Positives = 285/285 (100%), Gaps = 0/285 (0%)
NCBI
Show Blast
XP_002503390.1 Serine/threonine specific protein phosphatase PP1 catalytic subunit [Micromonas sp. RCC299]
Evalue: 2e-163 | Bitscore: 578
Identities = 276/282 (97%), Positives = 279/282 (98%), Gaps = 0/282 (0%)
NCBI
Show Blast
XP_001421196.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-163 | Bitscore: 578
Identities = 277/281 (98%), Positives = 277/281 (98%), Gaps = 0/281 (0%)
NCBI
Show Blast
EEH56809.1 Serine/threonine protein phosphatase [Micromonas pusilla CCMP1545]
Evalue: 5e-163 | Bitscore: 577
Identities = 276/282 (97%), Positives = 278/282 (98%), Gaps = 0/282 (0%)
NCBI
Show Blast
P62142 Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus GN=Ppp1cb PE=1 SV=3
Evalue: 1e-137 | Bitscore: 487
Identities = 217/279 (77%), Positives = 243/279 (87%)
SwissP
Show Blast
Q3SWW9 Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Bos taurus GN=PPP1CB PE=2 SV=1
Evalue: 1e-137 | Bitscore: 487
Identities = 217/279 (77%), Positives = 243/279 (87%)
SwissP
Show Blast
P62141 Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus GN=Ppp1cb PE=1 SV=3
Evalue: 1e-137 | Bitscore: 487
Identities = 217/279 (77%), Positives = 243/279 (87%)
SwissP
Show Blast
P62207 Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Gallus gallus GN=PPP1CB PE=1 SV=3
Evalue: 1e-137 | Bitscore: 487
Identities = 217/279 (77%), Positives = 243/279 (87%)
SwissP
Show Blast
P62140 Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Homo sapiens GN=PPP1CB PE=1 SV=3
Evalue: 1e-137 | Bitscore: 487
Identities = 217/279 (77%), Positives = 243/279 (87%)
SwissP
Show Blast
Q5R740 Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Pongo abelii GN=PPP1CB PE=2 SV=1
Evalue: 1e-137 | Bitscore: 487
Identities = 217/279 (77%), Positives = 243/279 (87%)
SwissP
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
Ot15g00340
Redo Blast
CDS Length
858 nucleotides
CDS Sequence

Protein 

Locus ID
Ot15g00340
Redo Blast
Protein Length
286 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

View in GenomeView|View in Artemini


EST IDOtEST02423 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDOtEST03145 Support ModelY More Info
CommentEST is mapped on the opposite strand of the predicted model
EST IDvio.99 Support ModelN More Info
CommentEST is not matching the given gene model.