- Gene ID
- Ot13g00010
- Locus
- Ot13g00010
- Functional Description
- Ubiquitin C-terminal hydrolase (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom13
- Last Modified On
- 09 March 2010 10h29
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Ubiquitin C-terminal hydrolase (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
cysteine-type endopeptidase activity
2.
obsolete ubiquitin thiolesterase activity
- Biological Process
-
1.
ubiquitin-dependent protein catabolic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR018200 |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site |
InterPro |
|
SSF54001 |
Cysteine proteinases |
superfamily |
|
IPR001394 |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 |
InterPro |
|
PTHR10420 |
UBIQUITIN SPECIFIC PROTEASE FAMILY C19-RELATED |
HMMPanther |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL56329.1 |
Ubiquitin C-terminal hydrolase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 770
Identities = 386/386 (100%), Positives = 386/386 (100%), Gaps = 0/386 (0%) |
NCBI |
Show Blast
|
| XP_001420878.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 4e-94 | Bitscore: 349
Identities = 187/365 (51%), Positives = 234/365 (64%), Gaps = 52/365 (14%) |
NCBI |
Show Blast
|
| NP_062334.2 |
ubiquitin carboxyl-terminal hydrolase 27 [Mus musculus] sp|Q8CEG8.2|UBP27_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
Evalue: 1e-45 | Bitscore: 188
Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| AAI37613.1 |
Usp27x protein [Mus musculus]
Evalue: 2e-45 | Bitscore: 187
Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| EDL33892.1 |
mCG3962 [Mus musculus]
Evalue: 2e-45 | Bitscore: 187
Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| BAC26935.1 |
unnamed protein product [Mus musculus]
Evalue: 3e-45 | Bitscore: 187
Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| NP_001138545.1 |
ubiquitin carboxyl-terminal hydrolase 27 [Homo sapiens] sp|A6NNY8.3|UBP27_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
Evalue: 4e-45 | Bitscore: 186
Identities = 121/385 (31%), Positives = 177/385 (45%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| XP_228777.4 |
PREDICTED: similar to ubiquitin specific protease 27, X chromosome [Rattus norvegicus]
Evalue: 4e-45 | Bitscore: 186
Identities = 122/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| EDL83857.1 |
rCG22861 [Rattus norvegicus]
Evalue: 5e-45 | Bitscore: 186
Identities = 122/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| AAF66953.1 |
ubiquitin specific protease [Mus musculus]
Evalue: 5e-45 | Bitscore: 186
Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAD79984.1 |
unknown [environmental sequence]
Evalue: 8e-12 | Bitscore: 71
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 11/186 (5%) |
GOS |
Show Blast
|
| EAB89844.1 |
unknown [environmental sequence]
Evalue: 1e-11 | Bitscore: 70
Identities = 41/117 (35%), Positives = 69/117 (58%), Gaps = 8/117 (6%) |
GOS |
Show Blast
|
| EAJ65160.1 |
unknown [environmental sequence]
Evalue: 3e-10 | Bitscore: 65
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 7/116 (6%) |
GOS |
Show Blast
|
| EAC30009.1 |
unknown [environmental sequence]
Evalue: 1e-08 | Bitscore: 60
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 8/114 (7%) |
GOS |
Show Blast
|
| EAD19004.1 |
unknown [environmental sequence]
Evalue: 1e-08 | Bitscore: 60
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 18/197 (9%) |
GOS |
Show Blast
|
| EAE35996.1 |
unknown [environmental sequence]
Evalue: 3e-07 | Bitscore: 56
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 13/187 (6%) |
GOS |
Show Blast
|
| EAH54520.1 |
unknown [environmental sequence]
Evalue: 7e-06 | Bitscore: 51
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 33/201 (16%) |
GOS |
Show Blast
|
| EAA95295.1 |
unknown [environmental sequence]
Evalue: 7e-06 | Bitscore: 51
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 19/147 (12%) |
GOS |
Show Blast
|
| EAG82512.1 |
unknown [environmental sequence]
Evalue: 4e-05 | Bitscore: 48
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 13/171 (7%) |
GOS |
Show Blast
|
| EAE58290.1 |
unknown [environmental sequence]
Evalue: 7e-05 | Bitscore: 48
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 28/194 (14%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL56329.1 |
Ubiquitin C-terminal hydrolase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 770
Identities = 386/386 (100%), Positives = 386/386 (100%), Gaps = 0/386 (0%) |
NCBI |
Show Blast
|
| XP_001420878.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 4e-94 | Bitscore: 349
Identities = 187/365 (51%), Positives = 234/365 (64%), Gaps = 52/365 (14%) |
NCBI |
Show Blast
|
| NP_062334.2 |
ubiquitin carboxyl-terminal hydrolase 27 [Mus musculus] sp|Q8CEG8.2|UBP27_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
Evalue: 1e-45 | Bitscore: 188
Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| AAI37613.1 |
Usp27x protein [Mus musculus]
Evalue: 2e-45 | Bitscore: 187
Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| EDL33892.1 |
mCG3962 [Mus musculus]
Evalue: 2e-45 | Bitscore: 187
Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| BAC26935.1 |
unnamed protein product [Mus musculus]
Evalue: 3e-45 | Bitscore: 187
Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| NP_001138545.1 |
ubiquitin carboxyl-terminal hydrolase 27 [Homo sapiens] sp|A6NNY8.3|UBP27_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
Evalue: 4e-45 | Bitscore: 186
Identities = 121/385 (31%), Positives = 177/385 (45%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| XP_228777.4 |
PREDICTED: similar to ubiquitin specific protease 27, X chromosome [Rattus norvegicus]
Evalue: 4e-45 | Bitscore: 186
Identities = 122/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| EDL83857.1 |
rCG22861 [Rattus norvegicus]
Evalue: 5e-45 | Bitscore: 186
Identities = 122/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| AAF66953.1 |
ubiquitin specific protease [Mus musculus]
Evalue: 5e-45 | Bitscore: 186
Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot11g00020 |
chrom11.0001 [3388..5454]
Evalue: 1e-22 | Bitscore: 102
Identities = 98/359 (27%), Positives = 148/359 (41%), Gaps = 55/359 (15%) |
Self |
Show Blast
|
| Ot11g02170 |
chrom11.0001 [369884..371626]
Evalue: 4e-15 | Bitscore: 77
Identities = 85/361 (23%), Positives = 141/361 (39%), Gaps = 58/361 (16%) |
Self |
Show Blast
|
| Ot01g03000 |
chrom01.0001 [467503..467517,467759..468093,468128..468481, 468545..468857,468912..471874,471914..473171,
Evalue: 2e-14 | Bitscore: 74
Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 9/149 (6%) |
Self |
Show Blast
|
| Ot04g02050 |
chrom04.0001 [301541..302729,302804..304869]
Evalue: 5e-13 | Bitscore: 70
Identities = 94/371 (25%), Positives = 142/371 (38%), Gaps = 68/371 (18%) |
Self |
Show Blast
|
| Ot02g05640 |
chrom02.0001 [669326..672838] inframe stop codon incomplete
Evalue: 4e-11 | Bitscore: 63
Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 10/103 (9%) |
Self |
Show Blast
|
| Ot01g01550 |
chrom01.0001 [228044..228293,228626..229940,229978..229993, 230036..230085,230127..230316,230384..232249]
Evalue: 6e-07 | Bitscore: 50
Identities = 67/247 (27%), Positives = 90/247 (36%), Gaps = 71/247 (28%) |
Self |
Show Blast
|
| Ot10g01360 |
chrom10.0001 [213719..214924]
Evalue: 0.0001 | Bitscore: 42
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 13/130 (10%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q8CEG8 |
Ubiquitin carboxyl-terminal hydrolase 27 OS=Mus musculus GN=Usp27 PE=2 SV=2
Evalue: 1e-45 | Bitscore: 184
Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 79/385 (20%) |
SwissP |
Show Blast
|
| A6NNY8 |
Ubiquitin carboxyl-terminal hydrolase 27 OS=Homo sapiens GN=USP27X PE=2 SV=3
Evalue: 3e-45 | Bitscore: 182
Identities = 121/385 (31%), Positives = 177/385 (45%), Gaps = 79/385 (20%) |
SwissP |
Show Blast
|
| Q5DU02 |
Ubiquitin carboxyl-terminal hydrolase 22 OS=Mus musculus GN=Usp22 PE=2 SV=2
Evalue: 1e-44 | Bitscore: 181
Identities = 119/386 (30%), Positives = 177/386 (45%), Gaps = 80/386 (20%) |
SwissP |
Show Blast
|
| Q6GNI6 |
Ubiquitin carboxyl-terminal hydrolase 22-A OS=Xenopus laevis GN=usp22-A PE=2 SV=1
Evalue: 1e-44 | Bitscore: 181
Identities = 119/386 (30%), Positives = 175/386 (45%), Gaps = 80/386 (20%) |
SwissP |
Show Blast
|
| Q9UPT9 |
Ubiquitin carboxyl-terminal hydrolase 22 OS=Homo sapiens GN=USP22 PE=1 SV=2
Evalue: 1e-44 | Bitscore: 180
Identities = 119/386 (30%), Positives = 177/386 (45%), Gaps = 80/386 (20%) |
SwissP |
Show Blast
|
| P0C8Z3 |
Ubiquitin carboxyl-terminal hydrolase 22 OS=Bos taurus GN=USP22 PE=2 SV=1
Evalue: 1e-44 | Bitscore: 180
Identities = 119/386 (30%), Positives = 178/386 (46%), Gaps = 80/386 (20%) |
SwissP |
Show Blast
|
| Q6DCJ1 |
Ubiquitin carboxyl-terminal hydrolase 22-B OS=Xenopus laevis GN=usp22-B PE=2 SV=2
Evalue: 3e-44 | Bitscore: 179
Identities = 119/386 (30%), Positives = 174/386 (45%), Gaps = 80/386 (20%) |
SwissP |
Show Blast
|
| A6H8I0 |
Ubiquitin carboxyl-terminal hydrolase 22 OS=Danio rerio GN=usp22 PE=2 SV=1
Evalue: 9e-44 | Bitscore: 177
Identities = 123/386 (31%), Positives = 177/386 (45%), Gaps = 82/386 (21%) |
SwissP |
Show Blast
|
| Q70EK9 |
Ubiquitin carboxyl-terminal hydrolase 51 OS=Homo sapiens GN=USP51 PE=2 SV=1
Evalue: 2e-39 | Bitscore: 163
Identities = 114/386 (29%), Positives = 175/386 (45%), Gaps = 81/386 (20%) |
SwissP |
Show Blast
|
| Q9VVR1 |
Ubiquitin carboxyl-terminal hydrolase nonstop OS=Drosophila melanogaster GN=not PE=1 SV=3
Evalue: 1e-38 | Bitscore: 160
Identities = 116/363 (31%), Positives = 173/363 (47%), Gaps = 45/363 (12%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT5G10790.1 |
| Symbols: UBP22 | UBP22 (UBIQUITIN-SPECIFIC PROTEASE 22); ubiquitin-specific protease | chr5:3410639-3412560
Evalue: 3e-39 | Bitscore: 159
Identities = 124/398 (31%), Positives = 180/398 (45%), Gaps = 90/398 (22%) |
Tair |
Show Blast
|
| AT4G24560.1 |
| Symbols: UBP16 | UBP16 (UBIQUITIN-SPECIFIC PROTEASE 16); ubiquitin-specific protease | chr4:12679503-12684538
Evalue: 5e-30 | Bitscore: 128
Identities = 102/352 (28%), Positives = 154/352 (43%), Gaps = 59/352 (16%) |
Tair |
Show Blast
|
| AT5G57990.1 |
| Symbols: UBP23 | UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23); ubiquitin-specific protease | chr5:23487444-23491223
Evalue: 6e-25 | Bitscore: 111
Identities = 100/350 (28%), Positives = 144/350 (41%), Gaps = 57/350 (16%) |
Tair |
Show Blast
|
| AT5G46740.1 |
| Symbols: UBP21 | UBP21 (UBIQUITIN-SPECIFIC PROTEASE 21); ubiquitin-specific protease | chr5:18982637-18985719
Evalue: 8e-23 | Bitscore: 104
Identities = 106/367 (28%), Positives = 156/367 (42%), Gaps = 69/367 (18%) |
Tair |
Show Blast
|
| AT4G31670.1 |
| Symbols: | ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein |
Evalue: 2e-22 | Bitscore: 103
Identities = 98/365 (26%), Positives = 152/365 (41%), Gaps = 57/365 (15%) |
Tair |
Show Blast
|
| AT1G17110.1 |
| Symbols: UBP15 | UBP15 (UBIQUITIN-SPECIFIC PROTEASE 15); ubiquitin-specific protease | chr1:5845809-5849882
Evalue: 4e-22 | Bitscore: 102
Identities = 100/357 (28%), Positives = 147/357 (41%), Gaps = 55/357 (15%) |
Tair |
Show Blast
|
| AT5G65450.1 |
| Symbols: | ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein |
Evalue: 1e-21 | Bitscore: 100
Identities = 94/352 (26%), Positives = 146/352 (41%), Gaps = 60/352 (17%) |
Tair |
Show Blast
|
| AT4G17895.1 |
| Symbols: UBP20 | UBP20 (UBIQUITIN-SPECIFIC PROTEASE 20); ubiquitin-specific protease | chr4:9939927-9942711
Evalue: 1e-20 | Bitscore: 97
Identities = 96/356 (26%), Positives = 147/356 (41%), Gaps = 72/356 (20%) |
Tair |
Show Blast
|
| AT3G14400.1 |
| Symbols: UBP25 | UBP25 (UBIQUITIN-SPECIFIC PROTEASE 25); ubiquitin-specific protease | chr3:4811960-4815217
Evalue: 1e-20 | Bitscore: 97
Identities = 97/364 (26%), Positives = 150/364 (41%), Gaps = 64/364 (17%) |
Tair |
Show Blast
|
| AT2G24640.1 |
| Symbols: | ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein |
Evalue: 3e-20 | Bitscore: 96
Identities = 95/356 (26%), Positives = 144/356 (40%), Gaps = 58/356 (16%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
