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Ostreococcus tauri


Gene ID
Ot12g01990
Locus
Ot12g01990
Functional Description
Guanylate kinase (IC)
Gene Type
protein-coding gene
Contig
chrom12
Last Modified On
09 March 2010 10h07
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
Guanylate kinase (IC)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
guanylate kinase activity

Biological Process
1.
purine nucleotide metabolic process

Protein Domains 


Domain IDDescriptionDatabase
G3DSA:3.40.50.300 no description Gene3D
PTHR23117 GUANYLATE KINASE-RELATED HMMPanther
IPR008144 Guanylate kinase InterPro
IPR008145 Guanylate kinase/L-type calcium channel InterPro
SSF52540 P-loop containing nucleoside triphosphate hydrolases superfamily
IPR020590 Guanylate kinase, conserved site InterPro
IPR017665 Guanylate kinase, sub-group InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL57290.1 Guanylate kinase (IC) [Ostreococcus tauri]
Evalue: 4e-119 | Bitscore: 430
Identities = 225/225 (100%), Positives = 225/225 (100%), Gaps = 0/225 (0%)
NCBI
Show Blast
XP_001420656.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-93 | Bitscore: 345
Identities = 184/225 (81%), Positives = 203/225 (90%), Gaps = 3/225 (1%)
NCBI
Show Blast
XP_002504870.1 predicted protein [Micromonas sp. RCC299]
Evalue: 2e-70 | Bitscore: 269
Identities = 128/181 (70%), Positives = 151/181 (83%), Gaps = 0/181 (0%)
NCBI
Show Blast
EEH55502.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-70 | Bitscore: 267
Identities = 129/182 (70%), Positives = 147/182 (80%), Gaps = 0/182 (0%)
NCBI
Show Blast
XP_002308036.1 predicted protein [Populus trichocarpa]
Evalue: 3e-63 | Bitscore: 245
Identities = 111/182 (60%), Positives = 142/182 (78%), Gaps = 0/182 (0%)
NCBI
Show Blast
EEE53309.1 hypothetical protein OsJ_36285 [Oryza sativa Japonica Group]
Evalue: 4e-63 | Bitscore: 244
Identities = 107/182 (58%), Positives = 145/182 (79%), Gaps = 0/182 (0%)
NCBI
Show Blast
NP_001066887.1 Os12g0515600 [Oryza sativa (japonica cultivar-group)]
Evalue: 4e-63 | Bitscore: 244
Identities = 107/182 (58%), Positives = 145/182 (79%), Gaps = 0/182 (0%)
NCBI
Show Blast
ABK93319.1 unknown [Populus trichocarpa]
Evalue: 8e-63 | Bitscore: 243
Identities = 110/182 (60%), Positives = 142/182 (78%), Gaps = 0/182 (0%)
NCBI
Show Blast
NP_001150648.1 guanylate kinase [Zea mays]
Evalue: 2e-61 | Bitscore: 239
Identities = 103/182 (56%), Positives = 144/182 (79%), Gaps = 0/182 (0%)
NCBI
Show Blast
XP_002288328.1 predicted protein [Thalassiosira pseudonana CCMP1335]
Evalue: 2e-61 | Bitscore: 239
Identities = 113/178 (63%), Positives = 138/178 (77%), Gaps = 0/178 (0%)
NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
Ot12g01990
Redo Blast
CDS Length
675 nucleotides
CDS Sequence

Protein 

Locus ID
Ot12g01990
Redo Blast
Protein Length
225 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a