- Gene ID
- Ot10g03620
- Locus
- Ot10g03620
- Functional Description
- U4/U6-associated splicing factor PRP4 (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom10
- Last Modified On
- 09 March 2010 8h40
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- U4/U6-associated splicing factor PRP4 (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
protein serine/threonine kinase activity
- Biological Process
-
1.
protein phosphorylation
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR017441 |
Protein kinase, ATP binding site |
InterPro |
|
IPR002290 |
Serine/threonine-protein kinase domain |
InterPro |
|
IPR017442 |
Serine/threonine-protein kinase-like domain |
InterPro |
|
PTHR11295 |
CDC2, MAP KINASE-RELATED |
HMMPanther |
|
IPR008271 |
Serine/threonine-protein kinase, active site |
InterPro |
|
IPR011009 |
Protein kinase-like domain |
InterPro |
|
IPR000719 |
Protein kinase, catalytic domain |
InterPro |
|
G3DSA:1.10.510.10 |
no description |
Gene3D |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL56320.1 |
U4/U6-associated splicing factor PRP4 (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1263
Identities = 772/772 (100%), Positives = 772/772 (100%), Gaps = 0/772 (0%) |
NCBI |
Show Blast
|
| XP_001420045.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 665
Identities = 351/448 (78%), Positives = 376/448 (83%), Gaps = 35/448 (7%) |
NCBI |
Show Blast
|
| EAC78763.1 |
unknown [environmental sequence]
Evalue: 1e-117 | Bitscore: 421
Identities = 193/235 (82%), Positives = 204/235 (86%) |
GOS |
Show Blast
|
| XP_002503782.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 6e-115 | Bitscore: 419
Identities = 225/437 (51%), Positives = 284/437 (64%), Gaps = 50/437 (11%) |
NCBI |
Show Blast
|
| EEH57881.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 7e-101 | Bitscore: 372
Identities = 217/443 (48%), Positives = 278/443 (62%), Gaps = 48/443 (10%) |
NCBI |
Show Blast
|
| ACN40327.1 |
unknown [Picea sitchensis]
Evalue: 6e-92 | Bitscore: 343
Identities = 201/445 (45%), Positives = 262/445 (58%), Gaps = 46/445 (10%) |
NCBI |
Show Blast
|
| XP_762453.1 |
hypothetical protein UM06306.1 [Ustilago maydis 521]
Evalue: 2e-88 | Bitscore: 331
Identities = 190/439 (43%), Positives = 237/439 (53%), Gaps = 56/439 (12%) |
NCBI |
Show Blast
|
| XP_001211381.1 |
hypothetical protein ATEG_02203 [Aspergillus terreus NIH2624]
Evalue: 7e-87 | Bitscore: 326
Identities = 169/372 (45%), Positives = 229/372 (61%), Gaps = 21/372 (5%) |
NCBI |
Show Blast
|
| XP_746572.1 |
protein kinase Yak1 [Aspergillus fumigatus Af293]
Evalue: 7e-87 | Bitscore: 326
Identities = 169/372 (45%), Positives = 228/372 (61%), Gaps = 21/372 (5%) |
NCBI |
Show Blast
|
| XP_001262420.1 |
protein kinase Yak1, putative [Neosartorya fischeri NRRL 181]
Evalue: 8e-87 | Bitscore: 326
Identities = 169/372 (45%), Positives = 228/372 (61%), Gaps = 21/372 (5%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAC78763.1 |
unknown [environmental sequence]
Evalue: 1e-117 | Bitscore: 421
Identities = 193/235 (82%), Positives = 204/235 (86%) |
GOS |
Show Blast
|
| EAB43129.1 |
unknown [environmental sequence]
Evalue: 2e-30 | Bitscore: 134
Identities = 53/118 (44%), Positives = 84/118 (71%) |
GOS |
Show Blast
|
| EAH47049.1 |
unknown [environmental sequence]
Evalue: 6e-30 | Bitscore: 132
Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 6/198 (3%) |
GOS |
Show Blast
|
| EAC10431.1 |
unknown [environmental sequence]
Evalue: 7e-30 | Bitscore: 132
Identities = 62/121 (51%), Positives = 78/121 (64%), Gaps = 2/121 (1%) |
GOS |
Show Blast
|
| EAK03129.1 |
unknown [environmental sequence]
Evalue: 8e-29 | Bitscore: 128
Identities = 103/354 (29%), Positives = 157/354 (44%), Gaps = 56/354 (15%) |
GOS |
Show Blast
|
| EAD21667.1 |
unknown [environmental sequence]
Evalue: 8e-27 | Bitscore: 122
Identities = 101/230 (43%), Positives = 124/230 (53%), Gaps = 23/230 (10%) |
GOS |
Show Blast
|
| EAH55747.1 |
unknown [environmental sequence]
Evalue: 5e-26 | Bitscore: 119
Identities = 81/220 (36%), Positives = 112/220 (50%), Gaps = 15/220 (6%) |
GOS |
Show Blast
|
| EAD66175.1 |
unknown [environmental sequence]
Evalue: 2e-24 | Bitscore: 114
Identities = 76/192 (39%), Positives = 107/192 (55%), Gaps = 20/192 (10%) |
GOS |
Show Blast
|
| EAD48550.1 |
unknown [environmental sequence]
Evalue: 2e-23 | Bitscore: 110
Identities = 60/136 (44%), Positives = 76/136 (55%), Gaps = 12/136 (8%) |
GOS |
Show Blast
|
| EAB60778.1 |
unknown [environmental sequence]
Evalue: 8e-23 | Bitscore: 108
Identities = 63/172 (36%), Positives = 97/172 (56%), Gaps = 19/172 (11%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL56320.1 |
U4/U6-associated splicing factor PRP4 (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1263
Identities = 772/772 (100%), Positives = 772/772 (100%), Gaps = 0/772 (0%) |
NCBI |
Show Blast
|
| XP_001420045.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 665
Identities = 351/448 (78%), Positives = 376/448 (83%), Gaps = 35/448 (7%) |
NCBI |
Show Blast
|
| XP_002503782.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 6e-115 | Bitscore: 419
Identities = 225/437 (51%), Positives = 284/437 (64%), Gaps = 50/437 (11%) |
NCBI |
Show Blast
|
| EEH57881.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 7e-101 | Bitscore: 372
Identities = 217/443 (48%), Positives = 278/443 (62%), Gaps = 48/443 (10%) |
NCBI |
Show Blast
|
| ACN40327.1 |
unknown [Picea sitchensis]
Evalue: 6e-92 | Bitscore: 343
Identities = 201/445 (45%), Positives = 262/445 (58%), Gaps = 46/445 (10%) |
NCBI |
Show Blast
|
| XP_762453.1 |
hypothetical protein UM06306.1 [Ustilago maydis 521]
Evalue: 2e-88 | Bitscore: 331
Identities = 190/439 (43%), Positives = 237/439 (53%), Gaps = 56/439 (12%) |
NCBI |
Show Blast
|
| XP_001211381.1 |
hypothetical protein ATEG_02203 [Aspergillus terreus NIH2624]
Evalue: 7e-87 | Bitscore: 326
Identities = 169/372 (45%), Positives = 229/372 (61%), Gaps = 21/372 (5%) |
NCBI |
Show Blast
|
| XP_746572.1 |
protein kinase Yak1 [Aspergillus fumigatus Af293]
Evalue: 7e-87 | Bitscore: 326
Identities = 169/372 (45%), Positives = 228/372 (61%), Gaps = 21/372 (5%) |
NCBI |
Show Blast
|
| XP_001262420.1 |
protein kinase Yak1, putative [Neosartorya fischeri NRRL 181]
Evalue: 8e-87 | Bitscore: 326
Identities = 169/372 (45%), Positives = 228/372 (61%), Gaps = 21/372 (5%) |
NCBI |
Show Blast
|
| XP_001274838.1 |
protein kinase Yak1, putative [Aspergillus clavatus NRRL 1]
Evalue: 8e-87 | Bitscore: 326
Identities = 169/372 (45%), Positives = 228/372 (61%), Gaps = 21/372 (5%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot05g02500 |
chrom05.0001 [374232..375581,375623..376425,376466..376826]
Evalue: 5e-47 | Bitscore: 184
Identities = 100/215 (46%), Positives = 133/215 (61%), Gaps = 9/215 (4%) |
Self |
Show Blast
|
| Ot18g01860 |
chrom18.0001 [285137..286498,286554..286628] incomplete
Evalue: 8e-41 | Bitscore: 164
Identities = 101/287 (35%), Positives = 150/287 (52%), Gaps = 26/287 (9%) |
Self |
Show Blast
|
| Ot04g01790 |
chrom04.0001 [252908..253118,253227..254974]
Evalue: 7e-35 | Bitscore: 144
Identities = 82/217 (37%), Positives = 120/217 (55%), Gaps = 6/217 (2%) |
Self |
Show Blast
|
| Ot01g05560 |
chrom01.0001 [912324..913361] incomplete
Evalue: 1e-32 | Bitscore: 136
Identities = 82/207 (39%), Positives = 120/207 (57%), Gaps = 7/207 (3%) |
Self |
Show Blast
|
| Ot07g01260 |
chrom07.0001 [184577..184656,184735..185848]
Evalue: 8e-20 | Bitscore: 94
Identities = 59/162 (36%), Positives = 92/162 (56%), Gaps = 7/162 (4%) |
Self |
Show Blast
|
| Ot04g00510 |
chrom04.0001 [63389..63448,63633..64709]
Evalue: 9e-20 | Bitscore: 94
Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 4/119 (3%) |
Self |
Show Blast
|
| Ot04g00130 |
chrom04.0001 [14277..15227,15327..15429,15497..16839]
Evalue: 1e-19 | Bitscore: 93
Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 5/170 (2%) |
Self |
Show Blast
|
| Ot15g00120 |
chrom15.0001 [21005..22279]
Evalue: 2e-17 | Bitscore: 86
Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 8/147 (5%) |
Self |
Show Blast
|
| Ot09g00650 |
chrom09.0001 [90832..91570,91901..91920]
Evalue: 5e-17 | Bitscore: 84
Identities = 66/266 (24%), Positives = 105/266 (39%), Gaps = 72/266 (27%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q9P6P3 |
Serine/threonine-protein kinase ppk15 OS=Schizosaccharomyces pombe GN=ppk15 PE=1 SV=1
Evalue: 2e-77 | Bitscore: 290
Identities = 155/363 (42%), Positives = 210/363 (57%), Gaps = 28/363 (7%) |
SwissP |
Show Blast
|
| Q54QV3 |
Probable serine/threonine-protein kinase yakA OS=Dictyostelium discoideum GN=yakA PE=1 SV=1
Evalue: 1e-73 | Bitscore: 278
Identities = 166/436 (38%), Positives = 235/436 (53%), Gaps = 43/436 (9%) |
SwissP |
Show Blast
|
| P14680 |
Dual specificity protein kinase YAK1 OS=Saccharomyces cerevisiae GN=YAK1 PE=1 SV=1
Evalue: 2e-72 | Bitscore: 273
Identities = 164/437 (37%), Positives = 225/437 (51%), Gaps = 52/437 (11%) |
SwissP |
Show Blast
|
| Q13627 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Homo sapiens GN=DYRK1A PE=1 SV=2
Evalue: 2e-56 | Bitscore: 221
Identities = 129/339 (38%), Positives = 180/339 (53%), Gaps = 36/339 (10%) |
SwissP |
Show Blast
|
| Q63470 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Rattus norvegicus GN=Dyrk1a PE=1 SV=2
Evalue: 2e-56 | Bitscore: 220
Identities = 129/339 (38%), Positives = 180/339 (53%), Gaps = 36/339 (10%) |
SwissP |
Show Blast
|
| Q61214 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Mus musculus GN=Dyrk1a PE=1 SV=1
Evalue: 3e-56 | Bitscore: 220
Identities = 129/339 (38%), Positives = 180/339 (53%), Gaps = 36/339 (10%) |
SwissP |
Show Blast
|
| Q9Z188 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Mus musculus GN=Dyrk1b PE=1 SV=3
Evalue: 1e-55 | Bitscore: 218
Identities = 131/341 (38%), Positives = 181/341 (53%), Gaps = 36/341 (10%) |
SwissP |
Show Blast
|
| Q8BI55 |
Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Mus musculus GN=Dyrk4 PE=1 SV=1
Evalue: 2e-55 | Bitscore: 218
Identities = 128/360 (35%), Positives = 179/360 (49%), Gaps = 56/360 (15%) |
SwissP |
Show Blast
|
| Q0IJ08 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus tropicalis GN=dyrk1a PE=2 SV=1
Evalue: 5e-55 | Bitscore: 216
Identities = 127/342 (37%), Positives = 182/342 (53%), Gaps = 42/342 (12%) |
SwissP |
Show Blast
|
| Q9Y463 |
Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Homo sapiens GN=DYRK1B PE=1 SV=1
Evalue: 5e-55 | Bitscore: 216
Identities = 131/341 (38%), Positives = 181/341 (53%), Gaps = 36/341 (10%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT5G35980.2 |
| Symbols: | protein kinase family protein | chr5:14145781-14151584 FORWARD
Evalue: 7e-83 | Bitscore: 305
Identities = 163/345 (47%), Positives = 221/345 (64%), Gaps = 22/345 (6%) |
Tair |
Show Blast
|
| AT5G35980.1 |
| Symbols: | protein kinase family protein | chr5:14145781-14153214 FORWARD
Evalue: 5e-81 | Bitscore: 299
Identities = 163/345 (47%), Positives = 221/345 (64%), Gaps = 22/345 (6%) |
Tair |
Show Blast
|
| AT2G40120.1 |
| Symbols: | protein kinase family protein | chr2:16762215-16764336 REVERSE
Evalue: 2e-41 | Bitscore: 167
Identities = 111/335 (33%), Positives = 167/335 (49%), Gaps = 58/335 (17%) |
Tair |
Show Blast
|
| AT3G25840.2 |
| Symbols: | protein kinase family protein | chr3:9454230-9457559 REVERSE
Evalue: 5e-40 | Bitscore: 162
Identities = 113/331 (34%), Positives = 160/331 (48%), Gaps = 45/331 (13%) |
Tair |
Show Blast
|
| AT3G17750.1 |
| Symbols: | protein kinase family protein | chr3:6074234-6078434 FORWARD
Evalue: 1e-39 | Bitscore: 161
Identities = 111/336 (33%), Positives = 167/336 (49%), Gaps = 66/336 (19%) |
Tair |
Show Blast
|
| AT3G25840.1 |
| Symbols: | protein kinase family protein | chr3:9454230-9458683 REVERSE
Evalue: 3e-39 | Bitscore: 160
Identities = 113/331 (34%), Positives = 160/331 (48%), Gaps = 45/331 (13%) |
Tair |
Show Blast
|
| AT3G53640.1 |
| Symbols: | protein kinase family protein | chr3:19897985-19899913 REVERSE
Evalue: 2e-38 | Bitscore: 157
Identities = 111/333 (33%), Positives = 159/333 (47%), Gaps = 48/333 (14%) |
Tair |
Show Blast
|
| AT1G73450.1 |
| Symbols: | protein kinase, putative | chr1:27617517-27622296 FORWARD
Evalue: 8e-38 | Bitscore: 155
Identities = 85/218 (38%), Positives = 129/218 (59%), Gaps = 8/218 (3%) |
Tair |
Show Blast
|
| AT1G73460.1 |
| Symbols: | protein kinase family protein | chr1:27623783-27628560 FORWARD
Evalue: 1e-37 | Bitscore: 155
Identities = 85/218 (38%), Positives = 129/218 (59%), Gaps = 8/218 (3%) |
Tair |
Show Blast
|
| AT1G13350.1 |
| Symbols: | protein kinase family protein | chr1:4572499-4576544 REVERSE
Evalue: 1e-37 | Bitscore: 155
Identities = 109/334 (32%), Positives = 160/334 (47%), Gaps = 50/334 (14%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
