- Gene ID
- Ot10g01360
- Locus
- Ot10g01360
- Functional Description
- Ubiquitin-specific protease (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom10
- Last Modified On
- 09 March 2010 8h05
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Ubiquitin-specific protease (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
cysteine-type endopeptidase activity
2.
obsolete ubiquitin thiolesterase activity
- Biological Process
-
1.
ubiquitin-dependent protein catabolic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR018200 |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site |
InterPro |
|
SSF54001 |
Cysteine proteinases |
superfamily |
|
IPR001394 |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 |
InterPro |
|
PTHR10420 |
UBIQUITIN SPECIFIC PROTEASE FAMILY C19-RELATED |
HMMPanther |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAH54520.1 |
unknown [environmental sequence]
Evalue: 1e-74 | Bitscore: 279
Identities = 166/370 (44%), Positives = 222/370 (60%), Gaps = 37/370 (10%) |
GOS |
Show Blast
|
| Q86T82 |
Ubiquitin carboxyl-terminal hydrolase 37 OS=Homo sapiens GN=USP37 PE=1 SV=1
Evalue: 2e-13 | Bitscore: 77
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 42/244 (17%) |
SwissP |
Show Blast
|
| Q8C0R0 |
Ubiquitin carboxyl-terminal hydrolase 37 OS=Mus musculus GN=Usp37 PE=1 SV=1
Evalue: 2e-13 | Bitscore: 77
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 42/231 (18%) |
SwissP |
Show Blast
|
| Q9ES63 |
Ubiquitin carboxyl-terminal hydrolase 29 OS=Mus musculus GN=Usp29 PE=2 SV=1
Evalue: 9e-12 | Bitscore: 71
Identities = 56/230 (24%), Positives = 111/230 (48%), Gaps = 36/230 (15%) |
SwissP |
Show Blast
|
| Q9BXU7 |
Ubiquitin carboxyl-terminal hydrolase 26 OS=Homo sapiens GN=USP26 PE=1 SV=1
Evalue: 2e-10 | Bitscore: 67
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 40/232 (17%) |
SwissP |
Show Blast
|
| A3AF13 |
Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp. japonica GN=UBP26 PE=2 SV=2
Evalue: 1e-09 | Bitscore: 65
Identities = 76/336 (22%), Positives = 133/336 (39%), Gaps = 74/336 (22%) |
SwissP |
Show Blast
|
| A2XDG4 |
Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp. indica GN=UBP26 PE=2 SV=1
Evalue: 1e-09 | Bitscore: 65
Identities = 76/336 (22%), Positives = 133/336 (39%), Gaps = 74/336 (22%) |
SwissP |
Show Blast
|
| Ot04g02050 |
chrom04.0001 [301541..302729,302804..304869]
Evalue: 7e-10 | Bitscore: 60
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 37/227 (16%) |
Self |
Show Blast
|
| Q9HBJ7 |
Ubiquitin carboxyl-terminal hydrolase 29 OS=Homo sapiens GN=USP29 PE=1 SV=1
Evalue: 3e-08 | Bitscore: 60
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 46/243 (18%) |
SwissP |
Show Blast
|
| Ot17g01610 |
chrom17.0001 [232902..232914,233160..234628]
Evalue: 1e-09 | Bitscore: 58
Identities = 92/373 (24%), Positives = 144/373 (38%), Gaps = 62/373 (16%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAH54520.1 |
unknown [environmental sequence]
Evalue: 1e-74 | Bitscore: 279
Identities = 166/370 (44%), Positives = 222/370 (60%), Gaps = 37/370 (10%) |
GOS |
Show Blast
|
| EAE80054.1 |
unknown [environmental sequence]
Evalue: 3e-06 | Bitscore: 52
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 25/224 (11%) |
GOS |
Show Blast
|
| No hits found against database NCBI with an e-value better than 1e-3. |
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot04g02050 |
chrom04.0001 [301541..302729,302804..304869]
Evalue: 7e-10 | Bitscore: 60
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 37/227 (16%) |
Self |
Show Blast
|
| Ot17g01610 |
chrom17.0001 [232902..232914,233160..234628]
Evalue: 1e-09 | Bitscore: 58
Identities = 92/373 (24%), Positives = 144/373 (38%), Gaps = 62/373 (16%) |
Self |
Show Blast
|
| Ot13g00010 |
chrom13.0001 [652..1812]
Evalue: 0.0008 | Bitscore: 40
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 9/110 (8%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q86T82 |
Ubiquitin carboxyl-terminal hydrolase 37 OS=Homo sapiens GN=USP37 PE=1 SV=1
Evalue: 2e-13 | Bitscore: 77
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 42/244 (17%) |
SwissP |
Show Blast
|
| Q8C0R0 |
Ubiquitin carboxyl-terminal hydrolase 37 OS=Mus musculus GN=Usp37 PE=1 SV=1
Evalue: 2e-13 | Bitscore: 77
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 42/231 (18%) |
SwissP |
Show Blast
|
| Q9ES63 |
Ubiquitin carboxyl-terminal hydrolase 29 OS=Mus musculus GN=Usp29 PE=2 SV=1
Evalue: 9e-12 | Bitscore: 71
Identities = 56/230 (24%), Positives = 111/230 (48%), Gaps = 36/230 (15%) |
SwissP |
Show Blast
|
| Q9BXU7 |
Ubiquitin carboxyl-terminal hydrolase 26 OS=Homo sapiens GN=USP26 PE=1 SV=1
Evalue: 2e-10 | Bitscore: 67
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 40/232 (17%) |
SwissP |
Show Blast
|
| A3AF13 |
Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp. japonica GN=UBP26 PE=2 SV=2
Evalue: 1e-09 | Bitscore: 65
Identities = 76/336 (22%), Positives = 133/336 (39%), Gaps = 74/336 (22%) |
SwissP |
Show Blast
|
| A2XDG4 |
Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp. indica GN=UBP26 PE=2 SV=1
Evalue: 1e-09 | Bitscore: 65
Identities = 76/336 (22%), Positives = 133/336 (39%), Gaps = 74/336 (22%) |
SwissP |
Show Blast
|
| Q9HBJ7 |
Ubiquitin carboxyl-terminal hydrolase 29 OS=Homo sapiens GN=USP29 PE=1 SV=1
Evalue: 3e-08 | Bitscore: 60
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 46/243 (18%) |
SwissP |
Show Blast
|
| Q9SCJ9 |
Ubiquitin carboxyl-terminal hydrolase 26 OS=Arabidopsis thaliana GN=UBP26 PE=1 SV=2
Evalue: 1e-07 | Bitscore: 58
Identities = 92/391 (23%), Positives = 155/391 (39%), Gaps = 79/391 (20%) |
SwissP |
Show Blast
|
| Q11119 |
Ubiquitin carboxyl-terminal hydrolase 14 OS=Schizosaccharomyces pombe GN=ubp14 PE=1 SV=2
Evalue: 2e-07 | Bitscore: 57
Identities = 72/280 (25%), Positives = 109/280 (38%), Gaps = 54/280 (19%) |
SwissP |
Show Blast
|
| Q17361 |
Ubiquitin carboxyl-terminal hydrolase 14 OS=Caenorhabditis elegans GN=usp-14 PE=2 SV=2
Evalue: 2e-07 | Bitscore: 57
Identities = 81/347 (23%), Positives = 134/347 (38%), Gaps = 46/347 (13%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT3G49600.1 |
| Symbols: UBP26 | UBP26 (ubiquitin-specific protease 26); ubiquitin-specific protease | chr3:18391927-18397647
Evalue: 8e-09 | Bitscore: 58
Identities = 92/391 (23%), Positives = 155/391 (39%), Gaps = 79/391 (20%) |
Tair |
Show Blast
|
| AT4G17895.1 |
| Symbols: UBP20 | UBP20 (UBIQUITIN-SPECIFIC PROTEASE 20); ubiquitin-specific protease | chr4:9939927-9942711
Evalue: 2e-07 | Bitscore: 53
Identities = 81/379 (21%), Positives = 138/379 (36%), Gaps = 96/379 (25%) |
Tair |
Show Blast
|
| AT5G57990.1 |
| Symbols: UBP23 | UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23); ubiquitin-specific protease | chr5:23487444-23491223
Evalue: 3e-06 | Bitscore: 49
Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 30/229 (13%) |
Tair |
Show Blast
|
| AT1G32850.1 |
| Symbols: | ubiquitin carboxyl-terminal hydrolase family protein | chr1:11902609-11906880 FORWARD
Evalue: 9e-05 | Bitscore: 45
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 17/132 (12%) |
Tair |
Show Blast
|
| AT3G21280.1 |
| Symbols: UBP7 | UBP7 (UBIQUITIN-SPECIFIC PROTEASE 7); ubiquitin-specific protease | chr3:7478172-7482043
Evalue: 0.0004 | Bitscore: 42
Identities = 76/354 (21%), Positives = 143/354 (40%), Gaps = 51/354 (14%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
