- Gene ID
- Ot09g03970
- Locus
- Ot09g03970
- Functional Description
- OSJNBa0011F23.4 [Oryza sativa (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom09
- Last Modified On
- 09 March 2010 7h33
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- OSJNBa0011F23.4 [Oryza sativa (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
catalytic activity
2.
carbohydrate binding
- Biological Process
-
1.
carbohydrate metabolic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR008183 |
Aldose 1-epimerase |
InterPro |
|
IPR011013 |
Glycoside hydrolase-type carbohydrate-binding |
InterPro |
|
IPR014718 |
Glycoside hydrolase-type carbohydrate-binding, subgroup |
InterPro |
|
PTHR11122 |
APOSPORY-ASSOCIATED PROTEIN C-RELATED |
HMMPanther |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL55556.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 4e-160 | Bitscore: 567
Identities = 279/279 (100%), Positives = 279/279 (100%), Gaps = 0/279 (0%) |
NCBI |
Show Blast
|
| XP_001419644.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-63 | Bitscore: 247
Identities = 139/264 (52%), Positives = 164/264 (62%), Gaps = 13/264 (4%) |
NCBI |
Show Blast
|
| XP_001692444.1 |
predicted protein [Chlamydomonas reinhardtii]
Evalue: 4e-54 | Bitscore: 215
Identities = 110/276 (39%), Positives = 156/276 (56%), Gaps = 8/276 (2%) |
NCBI |
Show Blast
|
| XP_002505394.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 3e-53 | Bitscore: 212
Identities = 124/283 (43%), Positives = 161/283 (56%), Gaps = 11/283 (3%) |
NCBI |
Show Blast
|
| YP_002355684.1 |
Aldose 1-epimerase [Thauera sp. MZ1T]
Evalue: 6e-52 | Bitscore: 208
Identities = 114/278 (41%), Positives = 158/278 (56%), Gaps = 15/278 (5%) |
NCBI |
Show Blast
|
| NP_001146695.1 |
hypothetical protein LOC100280296 [Zea mays]
Evalue: 3e-51 | Bitscore: 206
Identities = 119/289 (41%), Positives = 153/289 (52%), Gaps = 24/289 (8%) |
NCBI |
Show Blast
|
| XP_002447254.1 |
hypothetical protein SORBIDRAFT_06g031360 [Sorghum bicolor]
Evalue: 3e-51 | Bitscore: 206
Identities = 119/289 (41%), Positives = 153/289 (52%), Gaps = 24/289 (8%) |
NCBI |
Show Blast
|
| NP_001054126.1 |
Os04g0658000 [Oryza sativa (japonica cultivar-group)]
Evalue: 1e-50 | Bitscore: 203
Identities = 119/292 (40%), Positives = 152/292 (52%), Gaps = 24/292 (8%) |
NCBI |
Show Blast
|
| CAH67787.1 |
OSIGBa0132E09-OSIGBa0108L24.1 [Oryza sativa (indica cultivar-group)]
Evalue: 2e-50 | Bitscore: 203
Identities = 119/292 (40%), Positives = 152/292 (52%), Gaps = 24/292 (8%) |
NCBI |
Show Blast
|
| ACU18143.1 |
unknown [Glycine max]
Evalue: 4e-49 | Bitscore: 198
Identities = 118/291 (40%), Positives = 151/291 (51%), Gaps = 21/291 (7%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAG67106.1 |
unknown [environmental sequence]
Evalue: 7e-25 | Bitscore: 114
Identities = 82/270 (30%), Positives = 129/270 (47%), Gaps = 28/270 (10%) |
GOS |
Show Blast
|
| EAI27047.1 |
unknown [environmental sequence]
Evalue: 2e-21 | Bitscore: 102
Identities = 75/235 (31%), Positives = 117/235 (49%), Gaps = 17/235 (7%) |
GOS |
Show Blast
|
| EAJ45767.1 |
unknown [environmental sequence]
Evalue: 3e-21 | Bitscore: 102
Identities = 79/238 (33%), Positives = 118/238 (49%), Gaps = 23/238 (9%) |
GOS |
Show Blast
|
| EAJ81100.1 |
unknown [environmental sequence]
Evalue: 1e-15 | Bitscore: 83
Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 12/145 (8%) |
GOS |
Show Blast
|
| EAD53918.1 |
unknown [environmental sequence]
Evalue: 1e-10 | Bitscore: 67
Identities = 52/165 (31%), Positives = 72/165 (43%), Gaps = 14/165 (8%) |
GOS |
Show Blast
|
| EAG14193.1 |
unknown [environmental sequence]
Evalue: 1e-08 | Bitscore: 60
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 8/123 (6%) |
GOS |
Show Blast
|
| EAH88910.1 |
unknown [environmental sequence]
Evalue: 5e-08 | Bitscore: 57
Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 18/187 (9%) |
GOS |
Show Blast
|
| EAC85208.1 |
unknown [environmental sequence]
Evalue: 7e-08 | Bitscore: 57
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 45/250 (18%) |
GOS |
Show Blast
|
| EAE75285.1 |
unknown [environmental sequence]
Evalue: 4e-07 | Bitscore: 55
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 6/97 (6%) |
GOS |
Show Blast
|
| EAC11375.1 |
unknown [environmental sequence]
Evalue: 1e-06 | Bitscore: 53
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 23/159 (14%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL55556.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 4e-160 | Bitscore: 567
Identities = 279/279 (100%), Positives = 279/279 (100%), Gaps = 0/279 (0%) |
NCBI |
Show Blast
|
| XP_001419644.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-63 | Bitscore: 247
Identities = 139/264 (52%), Positives = 164/264 (62%), Gaps = 13/264 (4%) |
NCBI |
Show Blast
|
| XP_001692444.1 |
predicted protein [Chlamydomonas reinhardtii]
Evalue: 4e-54 | Bitscore: 215
Identities = 110/276 (39%), Positives = 156/276 (56%), Gaps = 8/276 (2%) |
NCBI |
Show Blast
|
| XP_002505394.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 3e-53 | Bitscore: 212
Identities = 124/283 (43%), Positives = 161/283 (56%), Gaps = 11/283 (3%) |
NCBI |
Show Blast
|
| YP_002355684.1 |
Aldose 1-epimerase [Thauera sp. MZ1T]
Evalue: 6e-52 | Bitscore: 208
Identities = 114/278 (41%), Positives = 158/278 (56%), Gaps = 15/278 (5%) |
NCBI |
Show Blast
|
| NP_001146695.1 |
hypothetical protein LOC100280296 [Zea mays]
Evalue: 3e-51 | Bitscore: 206
Identities = 119/289 (41%), Positives = 153/289 (52%), Gaps = 24/289 (8%) |
NCBI |
Show Blast
|
| XP_002447254.1 |
hypothetical protein SORBIDRAFT_06g031360 [Sorghum bicolor]
Evalue: 3e-51 | Bitscore: 206
Identities = 119/289 (41%), Positives = 153/289 (52%), Gaps = 24/289 (8%) |
NCBI |
Show Blast
|
| NP_001054126.1 |
Os04g0658000 [Oryza sativa (japonica cultivar-group)]
Evalue: 1e-50 | Bitscore: 203
Identities = 119/292 (40%), Positives = 152/292 (52%), Gaps = 24/292 (8%) |
NCBI |
Show Blast
|
| CAH67787.1 |
OSIGBa0132E09-OSIGBa0108L24.1 [Oryza sativa (indica cultivar-group)]
Evalue: 2e-50 | Bitscore: 203
Identities = 119/292 (40%), Positives = 152/292 (52%), Gaps = 24/292 (8%) |
NCBI |
Show Blast
|
| ACU18143.1 |
unknown [Glycine max]
Evalue: 4e-49 | Bitscore: 198
Identities = 118/291 (40%), Positives = 151/291 (51%), Gaps = 21/291 (7%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot04g01000 |
chrom04.0001 [146943..147986]
Evalue: 6e-24 | Bitscore: 106
Identities = 92/281 (32%), Positives = 127/281 (45%), Gaps = 37/281 (13%) |
Self |
Show Blast
|
| Ot01g05180 |
chrom01.0001 [850947..852182,852290..852784]
Evalue: 9e-18 | Bitscore: 85
Identities = 57/162 (35%), Positives = 79/162 (48%), Gaps = 17/162 (10%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q40784 |
Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1
Evalue: 1e-45 | Bitscore: 183
Identities = 111/288 (38%), Positives = 145/288 (50%), Gaps = 21/288 (7%) |
SwissP |
Show Blast
|
| Q03161 |
Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae GN=YMR099C PE=1 SV=1
Evalue: 4e-27 | Bitscore: 122
Identities = 95/281 (33%), Positives = 136/281 (48%), Gaps = 34/281 (12%) |
SwissP |
Show Blast
|
| P39173 |
Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli (strain K12) GN=yeaD PE=1 SV=2
Evalue: 4e-20 | Bitscore: 99
Identities = 83/252 (32%), Positives = 111/252 (44%), Gaps = 26/252 (10%) |
SwissP |
Show Blast
|
| P44160 |
Putative glucose-6-phosphate 1-epimerase OS=Haemophilus influenzae GN=HI1317 PE=3 SV=1
Evalue: 5e-11 | Bitscore: 68
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 45/221 (20%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT3G61610.1 |
| Symbols: | aldose 1-epimerase family protein | chr3:22810455-22812004 FORWARD
Evalue: 9e-47 | Bitscore: 183
Identities = 103/289 (35%), Positives = 149/289 (51%), Gaps = 20/289 (6%) |
Tair |
Show Blast
|
| AT5G57330.1 |
| Symbols: | aldose 1-epimerase family protein | chr5:23235618-23237890 FORWARD
Evalue: 7e-46 | Bitscore: 180
Identities = 110/285 (38%), Positives = 152/285 (53%), Gaps = 21/285 (7%) |
Tair |
Show Blast
|
| AT4G23730.1 |
| Symbols: | aldose 1-epimerase family protein | chr4:12362965-12364802 FORWARD
Evalue: 2e-45 | Bitscore: 179
Identities = 103/286 (36%), Positives = 147/286 (51%), Gaps = 21/286 (7%) |
Tair |
Show Blast
|
| AT3G01590.2 |
| Symbols: | aldose 1-epimerase family protein | chr3:226654-228353 FORWARD
Evalue: 1e-41 | Bitscore: 166
Identities = 96/282 (34%), Positives = 144/282 (51%), Gaps = 17/282 (6%) |
Tair |
Show Blast
|
| AT3G01590.1 |
| Symbols: | aldose 1-epimerase family protein | chr3:226654-228353 FORWARD
Evalue: 1e-41 | Bitscore: 166
Identities = 96/282 (34%), Positives = 144/282 (51%), Gaps = 17/282 (6%) |
Tair |
Show Blast
|
| AT5G14500.1 |
| Symbols: | aldose 1-epimerase family protein | chr5:4674506-4676371 REVERSE
Evalue: 1e-38 | Bitscore: 156
Identities = 95/282 (33%), Positives = 140/282 (49%), Gaps = 17/282 (6%) |
Tair |
Show Blast
|
| AT4G25900.1 |
| Symbols: | aldose 1-epimerase family protein | chr4:13161496-13163406 FORWARD
Evalue: 4e-38 | Bitscore: 155
Identities = 102/282 (36%), Positives = 139/282 (49%), Gaps = 20/282 (7%) |
Tair |
Show Blast
|
| AT5G66530.1 |
| Symbols: | aldose 1-epimerase family protein | chr5:26571047-26572801 REVERSE
Evalue: 3e-24 | Bitscore: 108
Identities = 85/298 (28%), Positives = 135/298 (45%), Gaps = 39/298 (13%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
