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Ostreococcus tauri


Gene ID
Ot08g01240
Locus
Ot08g01240
Functional Description
Phosphoinositide-specific phospholipase C (ISS)
Gene Type
protein-coding gene
Contig
chrom08
Last Modified On
09 March 2010 5h45
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
Phosphoinositide-specific phospholipase C (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
phosphatidylinositol phospholipase C activity

Biological Process
1.
lipid metabolic process

2.
signal transduction

 
Comment
Unknown GO IDs: GO:0007242

Protein Domains 


Domain IDDescriptionDatabase
IPR000909 Phospholipase C, phosphatidylinositol-specific , X domain InterPro
PTHR10336 PHOSPHOLIPASE C HMMPanther
IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain InterPro
IPR008973 C2 calcium/lipid-binding domain, CaLB InterPro
IPR001192 Phospholipase C, phosphoinositol-specific, C-terminal (PLC) InterPro
IPR000008 C2 calcium-dependent membrane targeting InterPro
IPR001711 Phospholipase C, phosphatidylinositol-specific, Y domain InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL54863.1 phosphoinositide-specific phospholipase C (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1117
Identities = 616/616 (100%), Positives = 616/616 (100%), Gaps = 0/616 (0%)
NCBI
Show Blast
XP_001419309.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-150 | Bitscore: 536
Identities = 290/501 (57%), Positives = 357/501 (71%), Gaps = 49/501 (9%)
NCBI
Show Blast
EEH59920.1 phospholipase [Micromonas pusilla CCMP1545]
Evalue: 3e-85 | Bitscore: 320
Identities = 192/474 (40%), Positives = 265/474 (55%), Gaps = 22/474 (4%)
NCBI
Show Blast
XP_002507225.1 predicted protein [Micromonas sp. RCC299]
Evalue: 3e-78 | Bitscore: 297
Identities = 185/480 (38%), Positives = 260/480 (54%), Gaps = 22/480 (4%)
NCBI
Show Blast
P21671 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Bos taurus GN=PLCD4 PE=1 SV=2
Evalue: 6e-45 | Bitscore: 182
Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 39/494 (7%)
SwissP
Show Blast
XP_002299804.1 predicted protein [Populus trichocarpa]
Evalue: 1e-32 | Bitscore: 145
Identities = 82/220 (37%), Positives = 124/220 (56%), Gaps = 30/220 (13%)
NCBI
Show Blast
ABW81002.1 PI-phospholipase C PLC2 [Solanum lycopersicum]
Evalue: 3e-32 | Bitscore: 144
Identities = 89/229 (38%), Positives = 116/229 (50%), Gaps = 27/229 (11%)
NCBI
Show Blast
CAA63893.1 phosphoinositide-specific phospholipase C [Solanum tuberosum]
Evalue: 2e-31 | Bitscore: 142
Identities = 88/230 (38%), Positives = 116/230 (50%), Gaps = 27/230 (11%)
NCBI
Show Blast
ACF93733.1 phospholipase C [Spinacia oleracea]
Evalue: 4e-31 | Bitscore: 140
Identities = 86/231 (37%), Positives = 121/231 (52%), Gaps = 29/231 (12%)
NCBI
Show Blast
XP_002278527.1 PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 6e-31 | Bitscore: 140
Identities = 81/230 (35%), Positives = 115/230 (50%), Gaps = 27/230 (11%)
NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

CDS  

Locus ID
Ot08g01240
Redo Blast
CDS Length
1851 nucleotides
CDS Sequence

Protein 

Locus ID
Ot08g01240
Redo Blast
Protein Length
617 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a