- Gene ID
- Ot06g04370
- Locus
- Ot06g04370
- Functional Description
- dihydrolipoamide S-succinyltransferase (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom06
- Last Modified On
- 09 March 2010 4h02
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- dihydrolipoamide S-succinyltransferase (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
| Domain ID | Description | Database |
|---|
|
PTHR23151 |
DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED |
HMMPanther |
|
G3DSA:2.40.50.100 |
no description |
Gene3D |
|
IPR006255 |
Dihydrolipoamide succinyltransferase |
InterPro |
|
IPR003016 |
2-oxo acid dehydrogenase, lipoyl-binding site |
InterPro |
|
IPR001078 |
2-oxoacid dehydrogenase acyltransferase, catalytic domain |
InterPro |
|
G3DSA:3.30.559.10 |
no description |
Gene3D |
|
IPR011053 |
Single hybrid motif |
InterPro |
|
IPR000089 |
Biotin/lipoyl attachment |
InterPro |
|
SSF52777 |
CoA-dependent acyltransferases |
superfamily |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53698.1 |
dihydrolipoamide S-succinyltransferase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 822
Identities = 449/449 (100%), Positives = 449/449 (100%), Gaps = 0/449 (0%) |
NCBI |
Show Blast
|
| XP_001416373.1 |
2-oxoglutarate dehydrogenase E2 subunit-like protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-174 | Bitscore: 617
Identities = 332/467 (71%), Positives = 361/467 (77%), Gaps = 40/467 (8%) |
NCBI |
Show Blast
|
| EEH56051.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-138 | Bitscore: 496
Identities = 273/468 (58%), Positives = 320/468 (68%), Gaps = 56/468 (11%) |
NCBI |
Show Blast
|
| XP_002504258.1 |
dihydrolipoyllysine-residue succinyltransferase [Micromonas sp. RCC299]
Evalue: 2e-112 | Bitscore: 410
Identities = 193/235 (82%), Positives = 215/235 (91%), Gaps = 2/235 (0%) |
NCBI |
Show Blast
|
| XP_002300330.1 |
predicted protein [Populus trichocarpa]
Evalue: 1e-102 | Bitscore: 377
Identities = 190/329 (57%), Positives = 236/329 (71%), Gaps = 7/329 (2%) |
NCBI |
Show Blast
|
| CBI23219.1 |
unnamed protein product [Vitis vinifera]
Evalue: 3e-100 | Bitscore: 369
Identities = 195/370 (52%), Positives = 243/370 (65%), Gaps = 46/370 (12%) |
NCBI |
Show Blast
|
| XP_001692539.1 |
dihydrolipoamide succinyltransferase, oxoglutarate dehydrogenase E2 component [Chlamydomonas reinhardtii]
Evalue: 2e-94 | Bitscore: 350
Identities = 163/234 (69%), Positives = 198/234 (84%), Gaps = 2/234 (0%) |
NCBI |
Show Blast
|
| AT4G26910.3 |
| Symbols: | 2-oxoacid dehydrogenase family protein | chr4:13520133-13522061 REVERSE
Evalue: 5e-91 | Bitscore: 331
Identities = 186/360 (51%), Positives = 233/360 (64%), Gaps = 44/360 (12%) |
Tair |
Show Blast
|
| AT4G26910.2 |
| Symbols: | 2-oxoacid dehydrogenase family protein | chr4:13520133-13522895 REVERSE
Evalue: 1e-90 | Bitscore: 330
Identities = 186/360 (51%), Positives = 233/360 (64%), Gaps = 44/360 (12%) |
Tair |
Show Blast
|
| AT4G26910.1 |
| Symbols: | 2-oxoacid dehydrogenase family protein | chr4:13520133-13522895 REVERSE
Evalue: 1e-90 | Bitscore: 330
Identities = 186/360 (51%), Positives = 233/360 (64%), Gaps = 44/360 (12%) |
Tair |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAI77936.1 |
unknown [environmental sequence]
Evalue: 1e-85 | Bitscore: 316
Identities = 175/431 (40%), Positives = 265/431 (61%), Gaps = 28/431 (6%) |
GOS |
Show Blast
|
| EAK51148.1 |
unknown [environmental sequence]
Evalue: 8e-78 | Bitscore: 290
Identities = 145/232 (62%), Positives = 180/232 (77%), Gaps = 2/232 (0%) |
GOS |
Show Blast
|
| EAB46286.1 |
unknown [environmental sequence]
Evalue: 2e-77 | Bitscore: 289
Identities = 135/232 (58%), Positives = 183/232 (78%), Gaps = 2/232 (0%) |
GOS |
Show Blast
|
| EAC21804.1 |
unknown [environmental sequence]
Evalue: 3e-77 | Bitscore: 288
Identities = 133/232 (57%), Positives = 182/232 (78%), Gaps = 2/232 (0%) |
GOS |
Show Blast
|
| EAF75608.1 |
unknown [environmental sequence]
Evalue: 1e-76 | Bitscore: 286
Identities = 132/232 (56%), Positives = 183/232 (78%), Gaps = 2/232 (0%) |
GOS |
Show Blast
|
| EAJ14065.1 |
unknown [environmental sequence]
Evalue: 1e-75 | Bitscore: 283
Identities = 143/232 (61%), Positives = 181/232 (78%), Gaps = 2/232 (0%) |
GOS |
Show Blast
|
| EAB28156.1 |
unknown [environmental sequence]
Evalue: 1e-75 | Bitscore: 283
Identities = 131/232 (56%), Positives = 179/232 (77%), Gaps = 2/232 (0%) |
GOS |
Show Blast
|
| EAC61461.1 |
unknown [environmental sequence]
Evalue: 2e-75 | Bitscore: 282
Identities = 131/233 (56%), Positives = 183/233 (78%), Gaps = 2/233 (0%) |
GOS |
Show Blast
|
| EAD14572.1 |
unknown [environmental sequence]
Evalue: 4e-75 | Bitscore: 281
Identities = 130/232 (56%), Positives = 183/232 (78%), Gaps = 2/232 (0%) |
GOS |
Show Blast
|
| EAF35484.1 |
unknown [environmental sequence]
Evalue: 6e-75 | Bitscore: 281
Identities = 128/232 (55%), Positives = 179/232 (77%), Gaps = 2/232 (0%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53698.1 |
dihydrolipoamide S-succinyltransferase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 822
Identities = 449/449 (100%), Positives = 449/449 (100%), Gaps = 0/449 (0%) |
NCBI |
Show Blast
|
| XP_001416373.1 |
2-oxoglutarate dehydrogenase E2 subunit-like protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-174 | Bitscore: 617
Identities = 332/467 (71%), Positives = 361/467 (77%), Gaps = 40/467 (8%) |
NCBI |
Show Blast
|
| EEH56051.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-138 | Bitscore: 496
Identities = 273/468 (58%), Positives = 320/468 (68%), Gaps = 56/468 (11%) |
NCBI |
Show Blast
|
| XP_002504258.1 |
dihydrolipoyllysine-residue succinyltransferase [Micromonas sp. RCC299]
Evalue: 2e-112 | Bitscore: 410
Identities = 193/235 (82%), Positives = 215/235 (91%), Gaps = 2/235 (0%) |
NCBI |
Show Blast
|
| XP_002300330.1 |
predicted protein [Populus trichocarpa]
Evalue: 1e-102 | Bitscore: 377
Identities = 190/329 (57%), Positives = 236/329 (71%), Gaps = 7/329 (2%) |
NCBI |
Show Blast
|
| CBI23219.1 |
unnamed protein product [Vitis vinifera]
Evalue: 3e-100 | Bitscore: 369
Identities = 195/370 (52%), Positives = 243/370 (65%), Gaps = 46/370 (12%) |
NCBI |
Show Blast
|
| XP_001692539.1 |
dihydrolipoamide succinyltransferase, oxoglutarate dehydrogenase E2 component [Chlamydomonas reinhardtii]
Evalue: 2e-94 | Bitscore: 350
Identities = 163/234 (69%), Positives = 198/234 (84%), Gaps = 2/234 (0%) |
NCBI |
Show Blast
|
| YP_003449761.1 |
2-oxoglutarate dehydrogenase E2 component [Azospirillum sp. B510]
Evalue: 3e-83 | Bitscore: 313
Identities = 148/231 (64%), Positives = 183/231 (79%), Gaps = 2/231 (0%) |
NCBI |
Show Blast
|
| YP_001119318.1 |
dihydrolipoamide acetyltransferase [Burkholderia vietnamiensis G4]
Evalue: 1e-80 | Bitscore: 304
Identities = 143/234 (61%), Positives = 183/234 (78%), Gaps = 2/234 (0%) |
NCBI |
Show Blast
|
| YP_423325.1 |
pyruvate/2-oxoglutarate dehydrogenase complex [Magnetospirillum magneticum AMB-1]
Evalue: 2e-80 | Bitscore: 303
Identities = 139/233 (59%), Positives = 182/233 (78%), Gaps = 1/233 (0%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot05g03030 |
chrom05.0001 [469305..470816]
Evalue: 9e-25 | Bitscore: 109
Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 10/233 (4%) |
Self |
Show Blast
|
| Ot03g01020 |
chrom03.0001 [172407..173048]
Evalue: 2e-16 | Bitscore: 82
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 5/182 (2%) |
Self |
Show Blast
|
| Ot10g00760 |
chrom10.0001 [126699..126707,126748..127500]
Evalue: 1e-09 | Bitscore: 59
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 6/145 (4%) |
Self |
Show Blast
|
| Ot06g02870 |
chrom06.0001 [435028..436572,436712..436837]
Evalue: 3e-07 | Bitscore: 51
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 5/91 (5%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| P19262 |
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
Evalue: 8e-85 | Bitscore: 314
Identities = 189/429 (44%), Positives = 253/429 (58%), Gaps = 43/429 (10%) |
SwissP |
Show Blast
|
| Q90512 |
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
Evalue: 9e-83 | Bitscore: 307
Identities = 160/236 (67%), Positives = 195/236 (82%), Gaps = 4/236 (1%) |
SwissP |
Show Blast
|
| Q9D2G2 |
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
Evalue: 1e-82 | Bitscore: 307
Identities = 158/236 (66%), Positives = 193/236 (81%), Gaps = 4/236 (1%) |
SwissP |
Show Blast
|
| Q01205 |
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
Evalue: 1e-82 | Bitscore: 307
Identities = 158/236 (66%), Positives = 192/236 (81%), Gaps = 4/236 (1%) |
SwissP |
Show Blast
|
| P11179 |
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
Evalue: 1e-82 | Bitscore: 306
Identities = 159/236 (67%), Positives = 195/236 (82%), Gaps = 4/236 (1%) |
SwissP |
Show Blast
|
| Q9N0F1 |
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
Evalue: 2e-82 | Bitscore: 306
Identities = 159/236 (67%), Positives = 196/236 (83%), Gaps = 4/236 (1%) |
SwissP |
Show Blast
|
| P36957 |
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
Evalue: 2e-82 | Bitscore: 306
Identities = 158/236 (66%), Positives = 192/236 (81%), Gaps = 4/236 (1%) |
SwissP |
Show Blast
|
| Q68XI8 |
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia typhi
Evalue: 2e-81 | Bitscore: 303
Identities = 180/427 (42%), Positives = 257/427 (60%), Gaps = 46/427 (10%) |
SwissP |
Show Blast
|
| P20708 |
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Azotobacter
Evalue: 4e-81 | Bitscore: 302
Identities = 186/412 (45%), Positives = 249/412 (60%), Gaps = 21/412 (5%) |
SwissP |
Show Blast
|
| Q4UKI7 |
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia felis
Evalue: 1e-80 | Bitscore: 300
Identities = 181/418 (43%), Positives = 246/418 (58%), Gaps = 25/418 (5%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT4G26910.3 |
| Symbols: | 2-oxoacid dehydrogenase family protein | chr4:13520133-13522061 REVERSE
Evalue: 5e-91 | Bitscore: 331
Identities = 186/360 (51%), Positives = 233/360 (64%), Gaps = 44/360 (12%) |
Tair |
Show Blast
|
| AT4G26910.2 |
| Symbols: | 2-oxoacid dehydrogenase family protein | chr4:13520133-13522895 REVERSE
Evalue: 1e-90 | Bitscore: 330
Identities = 186/360 (51%), Positives = 233/360 (64%), Gaps = 44/360 (12%) |
Tair |
Show Blast
|
| AT4G26910.1 |
| Symbols: | 2-oxoacid dehydrogenase family protein | chr4:13520133-13522895 REVERSE
Evalue: 1e-90 | Bitscore: 330
Identities = 186/360 (51%), Positives = 233/360 (64%), Gaps = 44/360 (12%) |
Tair |
Show Blast
|
| AT5G55070.1 |
| Symbols: | 2-oxoacid dehydrogenase family protein | chr5:22364863-22367635 FORWARD
Evalue: 5e-87 | Bitscore: 318
Identities = 159/232 (68%), Positives = 194/232 (83%), Gaps = 2/232 (0%) |
Tair |
Show Blast
|
| AT1G54220.1 |
| Symbols: | dihydrolipoamide S-acetyltransferase, putative | chr1:20250127-20253875 REVERSE
Evalue: 3e-27 | Bitscore: 119
Identities = 124/436 (28%), Positives = 196/436 (44%), Gaps = 34/436 (7%) |
Tair |
Show Blast
|
| AT1G54220.2 |
| Symbols: | dihydrolipoamide S-acetyltransferase, putative | chr1:20250127-20253875 REVERSE
Evalue: 3e-27 | Bitscore: 119
Identities = 124/436 (28%), Positives = 196/436 (44%), Gaps = 34/436 (7%) |
Tair |
Show Blast
|
| AT3G52200.1 |
| Symbols: LTA3 | LTA3 (Dihydrolipoamide S-acetyltransferase 3); dihydrolipoyllysine-residue acetyltransferase |
Evalue: 1e-25 | Bitscore: 114
Identities = 77/232 (33%), Positives = 126/232 (54%), Gaps = 11/232 (4%) |
Tair |
Show Blast
|
| AT3G13930.1 |
| Symbols: | dihydrolipoamide S-acetyltransferase, putative | chr3:4596247-4600150 FORWARD
Evalue: 1e-22 | Bitscore: 104
Identities = 77/230 (33%), Positives = 122/230 (53%), Gaps = 5/230 (2%) |
Tair |
Show Blast
|
| AT3G06850.2 |
| Symbols: LTA1, DIN3, BCE2 | DIN3/LTA1 (DARK INDUCIBLE 3); alpha-ketoacid dehydrogenase | chr3:2158218-2160471
Evalue: 1e-19 | Bitscore: 94
Identities = 57/203 (28%), Positives = 111/203 (54%), Gaps = 4/203 (1%) |
Tair |
Show Blast
|
| AT3G06850.1 |
| Symbols: LTA1, DIN3, BCE2 | DIN3/LTA1 (DARK INDUCIBLE 3); alpha-ketoacid dehydrogenase | chr3:2158218-2160471
Evalue: 1e-19 | Bitscore: 94
Identities = 57/203 (28%), Positives = 111/203 (54%), Gaps = 4/203 (1%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
