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Ostreococcus tauri


Gene ID
Ot06g04190
Locus
Ot06g04190
Functional Description
probable ThrC2 threonine synthase (ISS)
Gene Type
protein-coding gene
Contig
chrom06
Last Modified On
09 March 2010 3h59
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
probable ThrC2 threonine synthase (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
catalytic activity

2.
pyridoxal phosphate binding

Biological Process
1.
metabolic process

Protein Domains 


Domain IDDescriptionDatabase
IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit InterPro
PTHR10314 SER/THR DEHYDRATASE, TRP SYNTHASE HMMPanther
G3DSA:3.40.50.1100 no description Gene3D

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL53680.1 probable ThrC2 threonine synthase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 973
Identities = 593/593 (100%), Positives = 593/593 (100%), Gaps = 0/593 (0%)
NCBI
Show Blast
XP_001418305.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 7e-176 | Bitscore: 621
Identities = 359/598 (60%), Positives = 444/598 (74%), Gaps = 26/598 (4%)
NCBI
Show Blast
EAH50513.1 unknown [environmental sequence]
Evalue: 2e-98 | Bitscore: 359
Identities = 184/299 (61%), Positives = 225/299 (75%), Gaps = 3/299 (1%)
GOS
Show Blast
NP_435501.1 threonine synthase [Sinorhizobium meliloti 1021]
Evalue: 9e-52 | Bitscore: 209
Identities = 157/439 (35%), Positives = 232/439 (52%), Gaps = 14/439 (3%)
NCBI
Show Blast
XP_002506854.1 predicted protein [Micromonas sp. RCC299]
Evalue: 4e-45 | Bitscore: 187
Identities = 145/401 (36%), Positives = 209/401 (52%), Gaps = 20/401 (4%)
NCBI
Show Blast
ZP_01904187.1 threonine synthase [Roseobacter sp. AzwK-3b]
Evalue: 5e-40 | Bitscore: 170
Identities = 137/418 (32%), Positives = 206/418 (49%), Gaps = 29/418 (6%)
NCBI
Show Blast
ZP_05099256.1 threonine synthase [Roseobacter sp. GAI101]
Evalue: 2e-39 | Bitscore: 168
Identities = 136/433 (31%), Positives = 212/433 (48%), Gaps = 28/433 (6%)
NCBI
Show Blast
ZP_05122428.1 threonine synthase [Rhodobacteraceae bacterium KLH11]
Evalue: 1e-38 | Bitscore: 165
Identities = 136/437 (31%), Positives = 209/437 (47%), Gaps = 36/437 (8%)
NCBI
Show Blast
ZP_00956413.1 threonine synthase [Sulfitobacter sp. EE-36]
Evalue: 3e-38 | Bitscore: 164
Identities = 136/433 (31%), Positives = 209/433 (48%), Gaps = 28/433 (6%)
NCBI
Show Blast
ZP_00963240.1 threonine synthase [Sulfitobacter sp. NAS-14.1]
Evalue: 4e-38 | Bitscore: 164
Identities = 138/437 (31%), Positives = 210/437 (48%), Gaps = 36/437 (8%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
Ot06g04190
Redo Blast
CDS Length
1788 nucleotides
CDS Sequence

Protein 

Locus ID
Ot06g04190
Redo Blast
Protein Length
596 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a