- Gene ID
- Ot06g03970
- Locus
- Ot06g03970
- Functional Description
- Snf1 related kinase 1 (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom06
- Last Modified On
- 09 March 2010 3h56
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Snf1 related kinase 1 (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
protein serine/threonine kinase activity
- Biological Process
-
1.
protein phosphorylation
Protein Domains
| Domain ID | Description | Database |
|---|
|
SSF103243 |
Kinase associated domain 1, KA1 |
superfamily |
|
IPR001772 |
Kinase-associated KA1 |
InterPro |
|
IPR017442 |
Serine/threonine-protein kinase-like domain |
InterPro |
|
IPR008271 |
Serine/threonine-protein kinase, active site |
InterPro |
|
IPR011009 |
Protein kinase-like domain |
InterPro |
|
G3DSA:3.30.310.80 |
no description |
Gene3D |
|
IPR015940 |
Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote |
InterPro |
|
IPR000719 |
Protein kinase, catalytic domain |
InterPro |
|
G3DSA:1.10.510.10 |
no description |
Gene3D |
|
IPR020636 |
Calcium/calmodulin-dependent protein kinase-like |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53658.1 |
Snf1 related kinase 1 (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 957
Identities = 486/486 (100%), Positives = 486/486 (100%), Gaps = 0/486 (0%) |
NCBI |
Show Blast
|
| XP_001418541.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 775
Identities = 376/439 (85%), Positives = 399/439 (90%), Gaps = 8/439 (1%) |
NCBI |
Show Blast
|
| EEH53911.1 |
serine/threonine protein kinase [Micromonas pusilla CCMP1545]
Evalue: 6e-178 | Bitscore: 628
Identities = 300/444 (67%), Positives = 353/444 (79%), Gaps = 22/444 (4%) |
NCBI |
Show Blast
|
| XP_002507844.1 |
serine/threonine protein kinase [Micromonas sp. RCC299]
Evalue: 5e-174 | Bitscore: 615
Identities = 303/441 (68%), Positives = 356/441 (80%), Gaps = 11/441 (2%) |
NCBI |
Show Blast
|
| AT3G01090.2 |
| Symbols: SNRK1.1, AKIN10 | AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10); protein kinase | chr3:31444-34150 REVERSE
Evalue: 1e-149 | Bitscore: 524
Identities = 256/432 (59%), Positives = 318/432 (73%), Gaps = 14/432 (3%) |
Tair |
Show Blast
|
| Q38997 |
SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2
Evalue: 1e-148 | Bitscore: 524
Identities = 256/432 (59%), Positives = 318/432 (73%), Gaps = 14/432 (3%) |
SwissP |
Show Blast
|
| AT3G01090.3 |
| Symbols: SNRK1.1, AKIN10 | AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10) | chr3:31444-33984 REVERSE
Evalue: 1e-148 | Bitscore: 523
Identities = 256/432 (59%), Positives = 318/432 (73%), Gaps = 14/432 (3%) |
Tair |
Show Blast
|
| AT3G01090.1 |
| Symbols: SNRK1.1, AKIN10 | AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10); protein kinase | chr3:31444-33984 REVERSE
Evalue: 1e-148 | Bitscore: 523
Identities = 256/432 (59%), Positives = 318/432 (73%), Gaps = 14/432 (3%) |
Tair |
Show Blast
|
| XP_001757461.1 |
snf1a Snf1-related kinase SNF1a [Physcomitrella patens subsp. patens]
Evalue: 2e-144 | Bitscore: 516
Identities = 263/457 (57%), Positives = 325/457 (71%), Gaps = 33/457 (7%) |
NCBI |
Show Blast
|
| NP_850488.1 |
AKIN10 (Arabidopsis SNF1 kinase homolog 10); protein binding / protein kinase [Arabidopsis thaliana]
Evalue: 3e-144 | Bitscore: 516
Identities = 256/433 (59%), Positives = 318/433 (73%), Gaps = 14/433 (3%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAH47197.1 |
unknown [environmental sequence]
Evalue: 1e-140 | Bitscore: 498
Identities = 224/258 (86%), Positives = 247/258 (95%) |
GOS |
Show Blast
|
| EAC57861.1 |
unknown [environmental sequence]
Evalue: 1e-60 | Bitscore: 233
Identities = 103/134 (76%), Positives = 118/134 (88%) |
GOS |
Show Blast
|
| EAB27554.1 |
unknown [environmental sequence]
Evalue: 1e-48 | Bitscore: 194
Identities = 92/185 (49%), Positives = 123/185 (66%), Gaps = 1/185 (0%) |
GOS |
Show Blast
|
| EAC01581.1 |
unknown [environmental sequence]
Evalue: 9e-44 | Bitscore: 177
Identities = 99/251 (39%), Positives = 140/251 (55%), Gaps = 6/251 (2%) |
GOS |
Show Blast
|
| EAF66331.1 |
unknown [environmental sequence]
Evalue: 9e-38 | Bitscore: 157
Identities = 81/190 (42%), Positives = 116/190 (61%), Gaps = 6/190 (3%) |
GOS |
Show Blast
|
| EAI88019.1 |
unknown [environmental sequence]
Evalue: 2e-32 | Bitscore: 140
Identities = 77/202 (38%), Positives = 111/202 (54%), Gaps = 23/202 (11%) |
GOS |
Show Blast
|
| EAF15969.1 |
unknown [environmental sequence]
Evalue: 2e-31 | Bitscore: 137
Identities = 69/163 (42%), Positives = 102/163 (62%), Gaps = 9/163 (5%) |
GOS |
Show Blast
|
| EAJ83085.1 |
unknown [environmental sequence]
Evalue: 1e-30 | Bitscore: 134
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 2/179 (1%) |
GOS |
Show Blast
|
| EAE02031.1 |
unknown [environmental sequence]
Evalue: 2e-30 | Bitscore: 133
Identities = 66/162 (40%), Positives = 91/162 (56%), Gaps = 21/162 (12%) |
GOS |
Show Blast
|
| EAK00153.1 |
unknown [environmental sequence]
Evalue: 1e-27 | Bitscore: 124
Identities = 80/200 (40%), Positives = 109/200 (54%), Gaps = 19/200 (9%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53658.1 |
Snf1 related kinase 1 (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 957
Identities = 486/486 (100%), Positives = 486/486 (100%), Gaps = 0/486 (0%) |
NCBI |
Show Blast
|
| XP_001418541.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 775
Identities = 376/439 (85%), Positives = 399/439 (90%), Gaps = 8/439 (1%) |
NCBI |
Show Blast
|
| EEH53911.1 |
serine/threonine protein kinase [Micromonas pusilla CCMP1545]
Evalue: 6e-178 | Bitscore: 628
Identities = 300/444 (67%), Positives = 353/444 (79%), Gaps = 22/444 (4%) |
NCBI |
Show Blast
|
| XP_002507844.1 |
serine/threonine protein kinase [Micromonas sp. RCC299]
Evalue: 5e-174 | Bitscore: 615
Identities = 303/441 (68%), Positives = 356/441 (80%), Gaps = 11/441 (2%) |
NCBI |
Show Blast
|
| XP_001757461.1 |
snf1a Snf1-related kinase SNF1a [Physcomitrella patens subsp. patens]
Evalue: 2e-144 | Bitscore: 516
Identities = 263/457 (57%), Positives = 325/457 (71%), Gaps = 33/457 (7%) |
NCBI |
Show Blast
|
| NP_850488.1 |
AKIN10 (Arabidopsis SNF1 kinase homolog 10); protein binding / protein kinase [Arabidopsis thaliana]
Evalue: 3e-144 | Bitscore: 516
Identities = 256/433 (59%), Positives = 318/433 (73%), Gaps = 14/433 (3%) |
NCBI |
Show Blast
|
| NP_566130.1 |
AKIN10 (Arabidopsis SNF1 kinase homolog 10); protein binding / protein kinase [Arabidopsis thaliana]
Evalue: 4e-144 | Bitscore: 515
Identities = 256/433 (59%), Positives = 318/433 (73%), Gaps = 14/433 (3%) |
NCBI |
Show Blast
|
| BAH19438.1 |
AT3G01090 [Arabidopsis thaliana]
Evalue: 5e-144 | Bitscore: 515
Identities = 256/433 (59%), Positives = 318/433 (73%), Gaps = 14/433 (3%) |
NCBI |
Show Blast
|
| XP_001753161.1 |
snf1b Snf1-related protein kinase SNF1b [Physcomitrella patens subsp. patens]
Evalue: 5e-142 | Bitscore: 508
Identities = 264/457 (57%), Positives = 328/457 (71%), Gaps = 27/457 (5%) |
NCBI |
Show Blast
|
| BAD95888.1 |
Ser/Thr protein kinase [Lotus japonicus]
Evalue: 9e-142 | Bitscore: 508
Identities = 255/433 (58%), Positives = 317/433 (73%), Gaps = 11/433 (2%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot03g01130 |
chrom03.0001 [194621..195462,195527..195674,195712..196256,
Evalue: 4e-45 | Bitscore: 177
Identities = 95/203 (46%), Positives = 120/203 (59%), Gaps = 10/203 (4%) |
Self |
Show Blast
|
| Ot01g02880 |
chrom01.0001 [449050..450075]
Evalue: 3e-40 | Bitscore: 161
Identities = 93/243 (38%), Positives = 136/243 (55%), Gaps = 10/243 (4%) |
Self |
Show Blast
|
| Ot13g00830 |
chrom13.0001 [134329..134448,134541..135881]
Evalue: 1e-39 | Bitscore: 159
Identities = 84/209 (40%), Positives = 113/209 (54%), Gaps = 22/209 (10%) |
Self |
Show Blast
|
| Ot03g03430 |
chrom03.0001 [554268..554288,554327..555763]
Evalue: 2e-39 | Bitscore: 158
Identities = 90/206 (43%), Positives = 119/206 (57%), Gaps = 14/206 (6%) |
Self |
Show Blast
|
| Ot20g00620 |
chrom20.0001 [102259..103365]
Evalue: 8e-33 | Bitscore: 136
Identities = 81/219 (36%), Positives = 115/219 (52%), Gaps = 25/219 (11%) |
Self |
Show Blast
|
| Ot10g01060 |
chrom10.0001 [168711..169712]
Evalue: 5e-31 | Bitscore: 130
Identities = 65/179 (36%), Positives = 103/179 (57%), Gaps = 2/179 (1%) |
Self |
Show Blast
|
| Ot06g01800 |
chrom06.0001 [273790..275484]
Evalue: 2e-30 | Bitscore: 128
Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 9/188 (4%) |
Self |
Show Blast
|
| Ot04g05350 |
chrom04.0001 [811504..812200,812286..812358,812390..812656,
Evalue: 3e-29 | Bitscore: 124
Identities = 73/201 (36%), Positives = 104/201 (51%), Gaps = 17/201 (8%) |
Self |
Show Blast
|
| Ot07g01980 |
chrom07.0001 [305323..307308] incomplete
Evalue: 3e-29 | Bitscore: 124
Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 16/207 (7%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q38997 |
SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2
Evalue: 1e-148 | Bitscore: 524
Identities = 256/432 (59%), Positives = 318/432 (73%), Gaps = 14/432 (3%) |
SwissP |
Show Blast
|
| P92958 |
SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 PE=1 SV=1
Evalue: 1e-140 | Bitscore: 497
Identities = 247/440 (56%), Positives = 306/440 (69%), Gaps = 13/440 (2%) |
SwissP |
Show Blast
|
| Q02723 |
Carbon catabolite-derepressing protein kinase OS=Secale cereale GN=RKIN1 PE=2 SV=1
Evalue: 1e-125 | Bitscore: 449
Identities = 231/433 (53%), Positives = 297/433 (68%), Gaps = 22/433 (5%) |
SwissP |
Show Blast
|
| Q54YF2 |
5'-AMP-activated serine/threonine-protein kinase catalytic subunit alpha OS=Dictyostelium discoideum GN=snfA PE=2 SV=1
Evalue: 1e-89 | Bitscore: 331
Identities = 159/268 (59%), Positives = 196/268 (73%), Gaps = 4/268 (1%) |
SwissP |
Show Blast
|
| Q13131 |
5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4
Evalue: 2e-89 | Bitscore: 330
Identities = 174/368 (47%), Positives = 232/368 (63%), Gaps = 21/368 (5%) |
SwissP |
Show Blast
|
| Q5RDH5 |
5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2
Evalue: 2e-89 | Bitscore: 330
Identities = 174/368 (47%), Positives = 232/368 (63%), Gaps = 21/368 (5%) |
SwissP |
Show Blast
|
| P54645 |
5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus GN=Prkaa1 PE=1 SV=2
Evalue: 2e-89 | Bitscore: 329
Identities = 174/368 (47%), Positives = 232/368 (63%), Gaps = 21/368 (5%) |
SwissP |
Show Blast
|
| Q5EG47 |
5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus GN=Prkaa1 PE=1 SV=2
Evalue: 9e-89 | Bitscore: 327
Identities = 173/368 (47%), Positives = 231/368 (62%), Gaps = 21/368 (5%) |
SwissP |
Show Blast
|
| Q5RD00 |
5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Pongo abelii GN=PRKAA2 PE=2 SV=1
Evalue: 4e-88 | Bitscore: 325
Identities = 169/370 (45%), Positives = 230/370 (62%), Gaps = 19/370 (5%) |
SwissP |
Show Blast
|
| P54646 |
5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Homo sapiens GN=PRKAA2 PE=1 SV=2
Evalue: 8e-88 | Bitscore: 324
Identities = 169/370 (45%), Positives = 230/370 (62%), Gaps = 19/370 (5%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT3G01090.2 |
| Symbols: SNRK1.1, AKIN10 | AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10); protein kinase | chr3:31444-34150 REVERSE
Evalue: 1e-149 | Bitscore: 524
Identities = 256/432 (59%), Positives = 318/432 (73%), Gaps = 14/432 (3%) |
Tair |
Show Blast
|
| AT3G01090.3 |
| Symbols: SNRK1.1, AKIN10 | AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10) | chr3:31444-33984 REVERSE
Evalue: 1e-148 | Bitscore: 523
Identities = 256/432 (59%), Positives = 318/432 (73%), Gaps = 14/432 (3%) |
Tair |
Show Blast
|
| AT3G01090.1 |
| Symbols: SNRK1.1, AKIN10 | AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10); protein kinase | chr3:31444-33984 REVERSE
Evalue: 1e-148 | Bitscore: 523
Identities = 256/432 (59%), Positives = 318/432 (73%), Gaps = 14/432 (3%) |
Tair |
Show Blast
|
| AT3G29160.2 |
| Symbols: SNRK1.2, AKIN11 | AKIN11 (ARABIDOPSIS SNF1 KINASE HOMOLOG 11); protein kinase | chr3:11130130-11132747
Evalue: 1e-141 | Bitscore: 497
Identities = 247/440 (56%), Positives = 306/440 (69%), Gaps = 13/440 (2%) |
Tair |
Show Blast
|
| AT3G29160.1 |
| Symbols: SNRK1.2, AKIN11 | AKIN11 (ARABIDOPSIS SNF1 KINASE HOMOLOG 11); protein kinase | chr3:11130130-11132747
Evalue: 1e-141 | Bitscore: 497
Identities = 247/440 (56%), Positives = 306/440 (69%), Gaps = 13/440 (2%) |
Tair |
Show Blast
|
| AT5G39440.1 |
| Symbols: SnRK1.3 | SnRK1.3 (SNF1-RELATED PROTEIN KINASE 1.3); kinase | chr5:15799135-15801927 FORWARD
Evalue: 1e-122 | Bitscore: 434
Identities = 213/438 (48%), Positives = 294/438 (67%), Gaps = 28/438 (6%) |
Tair |
Show Blast
|
| AT3G29160.3 |
| Symbols: SNRK1.2, AKIN11 | AKIN11 (ARABIDOPSIS SNF1 KINASE HOMOLOG 11); protein kinase | chr3:11131005-11132747
Evalue: 1e-122 | Bitscore: 434
Identities = 199/264 (75%), Positives = 228/264 (86%) |
Tair |
Show Blast
|
| AT4G24400.2 |
| Symbols: SnRK3.13, PKS11, CIPK8 | CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) | chr4:12617389-12620453 FORWARD
Evalue: 3e-59 | Bitscore: 226
Identities = 104/199 (52%), Positives = 139/199 (69%), Gaps = 1/199 (0%) |
Tair |
Show Blast
|
| AT4G24400.1 |
| Symbols: SnRK3.13, PKS11, CIPK8 | CIPK8 (CBL-INTERACTING PROTEIN KINASE 8); kinase | chr4:12617389-12620491 FORWARD
Evalue: 3e-59 | Bitscore: 226
Identities = 104/199 (52%), Positives = 139/199 (69%), Gaps = 1/199 (0%) |
Tair |
Show Blast
|
| AT2G26980.5 |
| Symbols: SnRK3.17, CIPK3 | CIPK3 (CBL-INTERACTING PROTEIN KINASE 3); kinase | chr2:11522536-11525283 REVERSE
Evalue: 3e-57 | Bitscore: 219
Identities = 107/223 (47%), Positives = 143/223 (64%), Gaps = 8/223 (3%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | OtEST00047 |
Support Model | Y |
More Info |
| Mapping Location | 626279..626792 |
Strand - |
|
