- Gene ID
- Ot06g03600
- Locus
- Ot06g03600
- Functional Description
- Protoporphyrinogen oxidase (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom06
- Last Modified On
- 09 March 2010 3h49
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Protoporphyrinogen oxidase (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
oxygen-dependent protoporphyrinogen oxidase activity
- Biological Process
-
1.
obsolete electron transport
2.
porphyrin-containing compound biosynthetic process
3.
obsolete oxidation-reduction process
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53621.1 |
protoporphyrinogen IX oxidase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 962
Identities = 533/533 (100%), Positives = 533/533 (100%), Gaps = 0/533 (0%) |
NCBI |
Show Blast
|
| XP_001418278.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 839
Identities = 425/475 (89%), Positives = 446/475 (93%), Gaps = 4/475 (0%) |
NCBI |
Show Blast
|
| XP_002508166.1 |
protoporphyrinogen IX oxidase chloroplast precursor [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 733
Identities = 380/492 (77%), Positives = 421/492 (85%), Gaps = 7/492 (1%) |
NCBI |
Show Blast
|
| EEH53675.1 |
protoporphyrinogen IX oxidase [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 725
Identities = 380/491 (77%), Positives = 426/491 (86%), Gaps = 7/491 (1%) |
NCBI |
Show Blast
|
| XP_002273793.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 5e-132 | Bitscore: 475
Identities = 258/486 (53%), Positives = 338/486 (69%), Gaps = 13/486 (2%) |
NCBI |
Show Blast
|
| BAA34713.1 |
plastidal protoporphyrinogen oxidase [Nicotiana tabacum]
Evalue: 2e-131 | Bitscore: 473
Identities = 252/487 (51%), Positives = 335/487 (68%), Gaps = 15/487 (3%) |
NCBI |
Show Blast
|
| ACF82845.1 |
unknown [Zea mays]
Evalue: 2e-131 | Bitscore: 473
Identities = 258/487 (52%), Positives = 335/487 (68%), Gaps = 15/487 (3%) |
NCBI |
Show Blast
|
| NP_001105564.1 |
protoporphyrinogen IX oxidase [Zea mays]
Evalue: 3e-131 | Bitscore: 473
Identities = 258/487 (52%), Positives = 335/487 (68%), Gaps = 15/487 (3%) |
NCBI |
Show Blast
|
| ACN28356.1 |
unknown [Zea mays]
Evalue: 3e-131 | Bitscore: 473
Identities = 258/487 (52%), Positives = 335/487 (68%), Gaps = 15/487 (3%) |
NCBI |
Show Blast
|
| AAD02290.1 |
protoporphyrinogen oxidase PX-1 [Nicotiana tabacum]
Evalue: 4e-131 | Bitscore: 472
Identities = 252/487 (51%), Positives = 335/487 (68%), Gaps = 15/487 (3%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAD61697.1 |
unknown [environmental sequence]
Evalue: 1e-123 | Bitscore: 441
Identities = 224/260 (86%), Positives = 233/260 (89%), Gaps = 5/260 (1%) |
GOS |
Show Blast
|
| EAK61003.1 |
unknown [environmental sequence]
Evalue: 1e-28 | Bitscore: 127
Identities = 114/446 (25%), Positives = 200/446 (44%), Gaps = 49/446 (10%) |
GOS |
Show Blast
|
| EAD16078.1 |
unknown [environmental sequence]
Evalue: 3e-21 | Bitscore: 102
Identities = 84/297 (28%), Positives = 141/297 (47%), Gaps = 26/297 (8%) |
GOS |
Show Blast
|
| EAH48089.1 |
unknown [environmental sequence]
Evalue: 2e-18 | Bitscore: 93
Identities = 62/190 (32%), Positives = 103/190 (54%), Gaps = 6/190 (3%) |
GOS |
Show Blast
|
| EAC86066.1 |
unknown [environmental sequence]
Evalue: 1e-17 | Bitscore: 90
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 6/190 (3%) |
GOS |
Show Blast
|
| EAH07040.1 |
unknown [environmental sequence]
Evalue: 5e-13 | Bitscore: 75
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 34/267 (12%) |
GOS |
Show Blast
|
| EAD39754.1 |
unknown [environmental sequence]
Evalue: 1e-11 | Bitscore: 71
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 20/205 (9%) |
GOS |
Show Blast
|
| EAA81462.1 |
unknown [environmental sequence]
Evalue: 6e-11 | Bitscore: 68
Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 9/147 (6%) |
GOS |
Show Blast
|
| EAC29941.1 |
unknown [environmental sequence]
Evalue: 9e-06 | Bitscore: 51
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 11/178 (6%) |
GOS |
Show Blast
|
| EAI95518.1 |
unknown [environmental sequence]
Evalue: 1e-05 | Bitscore: 51
Identities = 30/63 (47%), Positives = 35/63 (55%), Gaps = 3/63 (4%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53621.1 |
protoporphyrinogen IX oxidase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 962
Identities = 533/533 (100%), Positives = 533/533 (100%), Gaps = 0/533 (0%) |
NCBI |
Show Blast
|
| XP_001418278.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 839
Identities = 425/475 (89%), Positives = 446/475 (93%), Gaps = 4/475 (0%) |
NCBI |
Show Blast
|
| XP_002508166.1 |
protoporphyrinogen IX oxidase chloroplast precursor [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 733
Identities = 380/492 (77%), Positives = 421/492 (85%), Gaps = 7/492 (1%) |
NCBI |
Show Blast
|
| EEH53675.1 |
protoporphyrinogen IX oxidase [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 725
Identities = 380/491 (77%), Positives = 426/491 (86%), Gaps = 7/491 (1%) |
NCBI |
Show Blast
|
| XP_002273793.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 5e-132 | Bitscore: 475
Identities = 258/486 (53%), Positives = 338/486 (69%), Gaps = 13/486 (2%) |
NCBI |
Show Blast
|
| BAA34713.1 |
plastidal protoporphyrinogen oxidase [Nicotiana tabacum]
Evalue: 2e-131 | Bitscore: 473
Identities = 252/487 (51%), Positives = 335/487 (68%), Gaps = 15/487 (3%) |
NCBI |
Show Blast
|
| ACF82845.1 |
unknown [Zea mays]
Evalue: 2e-131 | Bitscore: 473
Identities = 258/487 (52%), Positives = 335/487 (68%), Gaps = 15/487 (3%) |
NCBI |
Show Blast
|
| NP_001105564.1 |
protoporphyrinogen IX oxidase [Zea mays]
Evalue: 3e-131 | Bitscore: 473
Identities = 258/487 (52%), Positives = 335/487 (68%), Gaps = 15/487 (3%) |
NCBI |
Show Blast
|
| ACN28356.1 |
unknown [Zea mays]
Evalue: 3e-131 | Bitscore: 473
Identities = 258/487 (52%), Positives = 335/487 (68%), Gaps = 15/487 (3%) |
NCBI |
Show Blast
|
| AAD02290.1 |
protoporphyrinogen oxidase PX-1 [Nicotiana tabacum]
Evalue: 4e-131 | Bitscore: 472
Identities = 252/487 (51%), Positives = 335/487 (68%), Gaps = 15/487 (3%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot14g01410 |
chrom14.0001 [196668..198371]
Evalue: 0.0002 | Bitscore: 42
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 3/58 (5%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| O24163 |
Protoporphyrinogen oxidase, chloroplastic OS=Nicotiana tabacum GN=PPXI PE=2 SV=1
Evalue: 1e-129 | Bitscore: 463
Identities = 244/487 (50%), Positives = 324/487 (66%), Gaps = 15/487 (3%) |
SwissP |
Show Blast
|
| P55826 |
Protoporphyrinogen oxidase, chloroplastic OS=Arabidopsis thaliana GN=PPOX PE=2 SV=1
Evalue: 1e-128 | Bitscore: 459
Identities = 242/487 (49%), Positives = 327/487 (67%), Gaps = 15/487 (3%) |
SwissP |
Show Blast
|
| Q9AR38 |
Protoporphyrinogen oxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=PPOX1 PE=2 SV=1
Evalue: 1e-125 | Bitscore: 450
Identities = 247/490 (50%), Positives = 321/490 (65%), Gaps = 15/490 (3%) |
SwissP |
Show Blast
|
| Q94IG7 |
Protoporphyrinogen oxidase, chloroplastic/mitochondrial OS=Spinacia oleracea GN=POX2 PE=1 SV=1
Evalue: 3e-39 | Bitscore: 163
Identities = 139/511 (27%), Positives = 240/511 (46%), Gaps = 49/511 (9%) |
SwissP |
Show Blast
|
| O24164 |
Protoporphyrinogen oxidase, mitochondrial OS=Nicotiana tabacum GN=PPXII PE=1 SV=1
Evalue: 2e-35 | Bitscore: 150
Identities = 131/507 (25%), Positives = 232/507 (45%), Gaps = 44/507 (8%) |
SwissP |
Show Blast
|
| P56601 |
Protoporphyrinogen oxidase OS=Myxococcus xanthus GN=hemY PE=1 SV=1
Evalue: 2e-32 | Bitscore: 140
Identities = 137/485 (28%), Positives = 216/485 (44%), Gaps = 33/485 (6%) |
SwissP |
Show Blast
|
| P32397 |
Protoporphyrinogen oxidase OS=Bacillus subtilis GN=hemY PE=1 SV=1
Evalue: 4e-26 | Bitscore: 120
Identities = 139/506 (27%), Positives = 231/506 (45%), Gaps = 57/506 (11%) |
SwissP |
Show Blast
|
| Q54DT8 |
Protoporphyrinogen oxidase OS=Dictyostelium discoideum GN=ppox PE=3 SV=1
Evalue: 4e-18 | Bitscore: 93
Identities = 130/537 (24%), Positives = 213/537 (39%), Gaps = 95/537 (17%) |
SwissP |
Show Blast
|
| P50336 |
Protoporphyrinogen oxidase OS=Homo sapiens GN=PPOX PE=1 SV=1
Evalue: 2e-17 | Bitscore: 90
Identities = 130/502 (25%), Positives = 205/502 (40%), Gaps = 54/502 (10%) |
SwissP |
Show Blast
|
| Q10062 |
Protoporphyrinogen oxidase OS=Schizosaccharomyces pombe GN=hem14 PE=2 SV=1
Evalue: 6e-16 | Bitscore: 86
Identities = 122/525 (23%), Positives = 227/525 (43%), Gaps = 76/525 (14%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT4G01690.1 |
| Symbols: HEMG1, PPOX | PPOX (PROTOPORPHYRINOGEN OXIDASE); protoporphyrinogen oxidase | chr4:729929-732309 FORWARD
Evalue: 1e-129 | Bitscore: 459
Identities = 242/487 (49%), Positives = 327/487 (67%), Gaps = 15/487 (3%) |
Tair |
Show Blast
|
| AT4G01690.2 |
| Symbols: HEMG1, PPOX | PPOX (PROTOPORPHYRINOGEN OXIDASE) | chr4:729929-732309 FORWARD
Evalue: 1e-116 | Bitscore: 416
Identities = 229/487 (47%), Positives = 307/487 (63%), Gaps = 46/487 (9%) |
Tair |
Show Blast
|
| AT5G14220.1 |
| Symbols: HEMG2, MEE61 | HEMG2/MEE61 (maternal effect embryo arrest 61); oxidoreductase/ protoporphyrinogen oxidase |
Evalue: 2e-39 | Bitscore: 160
Identities = 139/507 (27%), Positives = 228/507 (44%), Gaps = 45/507 (8%) |
Tair |
Show Blast
|
| AT1G65840.1 |
| Symbols: ATPAO4 | ATPAO4 (POLYAMINE OXIDASE 4); amine oxidase | chr1:24493836-24496391 FORWARD
Evalue: 0.0006 | Bitscore: 42
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 17/124 (13%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
