Ostreococcus tauri

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Gene Function
Gene Ontology
Protein Domains
Protein Homologs
Gene Structure
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Protein
Est Cdna

Ostreococcus tauri

Gene ID: Ot06g03280
Locus: Ot06g03280
Functional Description: unnamed product
Gene Type: protein-coding gene
Contig: chrom06
Last Modified On: 09 March 2010 3h43
History

Annotator
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Name: EuGene Automatic Prediction
Email: beg-orcae@psb.ugent.be
Lab: UGent
Status: active

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Gene Function
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Short Name: n/a
Alternative Names: n/a
Definition: unnamed product
Additional Functional Description: n/a
Pubmed ID: n/a
EC Number: n/a
KOGid: n/a

Gene Ontology
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Cellular Component: 1.

GO:0030288

outer membrane-bounded periplasmic space
Molecular Function: 1.

GO:0005215

transporter activity
Biological Process: 1.

GO:0006810

transport

Protein Domains
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Domain ID	Description	Database
IPR021827	Protein of unknown function DUF3414	InterPro

Protein Homologs
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View in Jalview

ProteinID	Description / BlastScore	Database	Actions
CAL53587.1	unnamed protein product [Ostreococcus tauri] Evalue: 0.0 \| Bitscore: 3922 Identities = 1966/1966 (100%), Positives = 1966/1966 (100%), Gaps = 0/1966 (0%)	NCBI	Show Blast
XP_001418259.1	predicted protein [Ostreococcus lucimarinus CCE9901] Evalue: 0.0 \| Bitscore: 2805 Identities = 1422/1984 (71%), Positives = 1648/1984 (83%), Gaps = 29/1984 (1%)	NCBI	Show Blast
XP_002500285.1	predicted protein [Micromonas sp. RCC299] Evalue: 6e-80 \| Bitscore: 304 Identities = 295/1075 (27%), Positives = 453/1075 (42%), Gaps = 221/1075 (20%)	NCBI	Show Blast
CBI28192.1	unnamed protein product [Vitis vinifera] Evalue: 4e-73 \| Bitscore: 282 Identities = 393/1619 (24%), Positives = 692/1619 (42%), Gaps = 234/1619 (14%)	NCBI	Show Blast
XP_002453504.1	hypothetical protein SORBIDRAFT_04g007000 [Sorghum bicolor] Evalue: 1e-72 \| Bitscore: 280 Identities = 392/1731 (22%), Positives = 723/1731 (41%), Gaps = 263/1731 (15%)	NCBI	Show Blast
XP_001776120.1	predicted protein [Physcomitrella patens subsp. patens] Evalue: 8e-71 \| Bitscore: 274 Identities = 426/1753 (24%), Positives = 725/1753 (41%), Gaps = 347/1753 (19%)	NCBI	Show Blast
EEE56517.1	hypothetical protein OsJ_05800 [Oryza sativa Japonica Group] Evalue: 1e-67 \| Bitscore: 263 Identities = 377/1620 (23%), Positives = 678/1620 (41%), Gaps = 249/1620 (15%)	NCBI	Show Blast
EEC72699.1	hypothetical protein OsI_06283 [Oryza sativa Indica Group] Evalue: 2e-66 \| Bitscore: 259 Identities = 406/1860 (21%), Positives = 755/1860 (40%), Gaps = 309/1860 (16%)	NCBI	Show Blast
BAA97383.1	unnamed protein product [Arabidopsis thaliana] Evalue: 7e-58 \| Bitscore: 231 Identities = 388/1680 (23%), Positives = 684/1680 (40%), Gaps = 239/1680 (14%)	NCBI	Show Blast
AT5G51200.1	\| Symbols: \| similar to unnamed protein product [Vitis vinifera] (GB:CAO65658.1); similar to predicted protein Evalue: 2e-58 \| Bitscore: 225 Identities = 372/1573 (23%), Positives = 647/1573 (41%), Gaps = 206/1573 (13%)	Tair	Show Blast

Gene Structure
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View in GenomeView|View in Artemini

Download gene in EMBL format

Structure: ;500768..501298,501343..506766;
Sequence Type: mRNA
Strand: +
Structure Quality: 2

CDS
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Locus ID: Ot06g03280
: Redo Blast
CDS Length: 5955 nucleotides
CDS Sequence: ATGTTCGCTCTGCCCGCGGCGACGCCCACCGTGGCCGCGGCCGGTCCGATCGCGTCGACGAGCGAACCTTCGAGCACGAAGAGCGGTGATGGGAGCTCACCCGCGTCGAGGTTTCAGCACCTCCTGTCCGCCCTGCGAAGGCTCGAGCTCGGACGGGTGAGCGAGCGCGATCGAGAGCGCGCGCGCGCGGCACTTCGATTGAACGAGAAGCGTCTGCGAGAGGCGGTGTTTTTTGAGCCGCGTCGAGCCGAGGATGCGGCCAAGGTGACGTCGGGAACGGTGACGCTGAGCCACGGACTTGAGGTACGCCTGGGAGAGTTGGACGTGGAGCACGCGAGTAAGATCGCGGTGGCGCTGGACGTTAATGAGATAGCGAGCGTCGAGCTCATAGTAGGCGCGATAGAGAACGGGGCGCCGGCGGACGACGTGGTGCCGTCGGCTGTGGGGATTTACATGCGCGAGCGCATGGCGGCGCTGGAGTCGCTACTCGTCGTTCTGAGGTGCGCCGATGGATCGACGCCGCTCGATGGCGGATGGTTCGCTTTTCGACACCTGGTGAAACTCGTCACGGCGCCACCGCCTGGCGGACCGTTTCTTGTCGCACCGCAACAACCACAGGCTGGCGCGCTAGTGCTCACAAACGCACCGACTCAACCTGTCGGACGTGCGCTTGGTCCGATGGATAAATTGTTCGACATTCGCGGGCGTCCGATGTTGCGACAAGAATGCGTTGCACAGGAGCGCAGGTTAGTTGTTGAGTGTTTGTTCCACTCGGCTCGTGTTTCACCAAGCCTGAGCATTGAAAACGCCCAGGCGCTTTTAGTTTTAGCCGGAAGATCGGCTGATGCGATGAAACAGCTGGAGAAAGTTGCAGTAGAGGATGTCCCAACCGGATACGGCTCAATTTTCGCCGCCGCGGCAATGTTCACACCTGTCAAATCAGGAGTGGAGTCCGCGATGACGAAGATGGAGCTCGCAAAGGGTGTGCTGTCAGCGATCAATTCGCCGAACGCGCCGCCACTCTTTTCGTTCATTCGATTCGCATGGGCCACGTTGGGTCTTGATTTGGGGTTACCAGAAGCCGAGGAAAGTATTCGAGAGAGTCTGAAGAACGATGGCCTCGAGGCCATTGATCTGATTCTGAAAACAGGCGTATTTCAAGACGAACACGTCGCCGCTCGATCTCAGAATCTGATGCTCGTAGATACAATTCTATCCCGGTACCTGCACCATAACCTGCGTAAAACAACGTTGCATAGAATGCTCACTGACGGCACAGGTGTGCGGGCACCTTTTGTGGAAAATGGAGTCACCATTGAAATCGATCCGGCGAAACCCATGGCTGATTTATGCTCCGTATTCTCAGAGATCTACACGCAAAAACCAGAAATGGCGGACGGTTGCTCAAATTTAAAGAGTTTTCTCGAGATCGCAGGTGATAGCGAGCACTCCGTCGGCTCACTGGTGAAACTTTTGGATCTTTGCAGGACCATTGCGCAGACGACTGAAGGATCGAGACGCATTTTTGAACTTCTTCAACGTAGTCAAGGCGCGGCCAACTGGGATCGTTTGTTGGGTGCGCTGATTGGTTATGTACAGCGTTTCATGTCGAGTCCGGATGATTTGTTAGACGCTGGAGAAGAGTACGATCCGAGAGATGGGGAGCCTGAGATGAACGAGGCAGATGCCGAGGGATTACGAGCCTATCTGTCCGTGTTCAAGGCAGTGATGGAACACGCTGAGCGCACGGACGCTGCACACTGGCTTATGTGGCTAGAACATAGGATTGGAGCGTCGTTGATGGATGCGCTGCTTCAGTTATACATCAATCCGGTTCCGTCGTCACTCAAGGCGTCGCTTCTAGACGCTATTAGCGCACTTTGTTGGGATTCGAACAAGGCGTCGGACGTTTGGCAACTACTCGACCAGGCAGGTATATTGCCGAATCCGTCACAAACTGGTATGTTACAAACGGTGCAGTCGCAGAGGTGCGATATTCTGTACATTTACTCCGTGGTCGAATCGCAGGAACAGTCGTATGCGAGCACCGCAGCGTGGCTACGTTTGATCAGTAAACTCTTGATGATAACCCAAGACAGCGAACTCGGACCTTGCTCGGACGCATGCAGTCCAGCATGGTTTCATTCTCGATTTATTCGAGAGCGACTTTTCGGCGAACTAGACACACGCGTGCACAAGGACCAAACGGAGCGCTGGAGAATGGCTCGCGATTGCATCGACCACTTCCTGTTTGTTCTGCGAACGAGTGAAAATTATCCGTCCATCTCTGGTATGGAAGACTCAGGCACACCGAATATAGGTGCTCCTCTAGTCATCAGTCAGGGCGAGTCTTCAACAGCATTGACGATCAGGAATGCGGATCAATCTCAAGGTGTATCTGATCGATCGGGCACCCCAGGCTCAGATATCCTCTTGGACTTCTTAACGACTGGGCCGACTTTCAGAATGGTGATGAACATCCTTTCTATTGGTGCGGAGCATCTGAGTTTCGAGCGGAATGCGCCTCATGGTGACGCGTTGGAGCGCTGTGTATTAGGTTCTTTGCAGTTGCTCGACTACATGATGTCGATTGACGTACATGCAGTCAGGAAGCTGCGTGTGAAGAATAAGGAAGCGTTCTTCTATCGTACCGTGGATGAATCCTTAAGTGCAGATATTACGCTGATGGCGAACGTGCTCGGCTATGTTCAGTACAAGTATAGCGCCGAGATCCCGCTGGCGGCGCTTAAAATTTTGCGCGTTCTCTGTAGCCGAATAGATCACATTGTGCTAGTACTTCCTCCGGTCTCGAGAGCCGCGCTGGTGGAGGGTTGCGCAAGCTGTCTGGAGCTCGCTTTTGCCATGCCTCCTCCAGGCGAAGGTGAATCAATAGCGGACGAGAACGCTCAAAATGCGATCGAATGTGCCAGTTTAGTATTTGCGCTGCTTCACGAAAACTTGACGCGTCCGGGTACTAACCTATCACACCTGTTATTGGGCTTTGATCTCACTGGAGCGTCAAGCGAGATGGCCTTACGGCCGTTTTCAGAGTTCAACTGTTTGAGCGTACTCTTCGAGCTTTTAGAGGCAGCTCCGCCCTCGATGCACGCCAGCGTCGTCTTACCGTTTGAAGCTCCAGAACTCGCCGCAGATTTGTTACACCGTCTCGCGACGTTGAAGTCTACTGCGCCGCCCGTATTGGCACTGCTCCAACAGTGGCCGCCGCACGCACCAAGCGCAGTGCTACCAGATTTACTCGCAGATGCGCTTCGTACGCATCTTCCAGATGAACCGGCGAAAAGAAGATCCGTGATGCATCATCGTGCAAGTATTTTGCGTCTGTGCGCAGAAGTTCTGGACGTTGAGTCTCCTCCAGCAAAGAACCGCCTGCCAGAGATGGCGCCGGCGCTTGTATTGGATATCATGACTGTTTTGCTCGATAACGGTCGAGAAGGCCTCAGCACGTACGCACACGATGTGAACGTTGAGCACGGTCAGTTTGCGGTATTAGAGCTCCCGAAGAGCATCACTCATTTATCGGGGGCGCACCACGAACACGCGATTACAGCAAACTTTGGTCCCGAGATACTTGAGACGATGGAGGAACTCTCAGCGACGCAAATTTTGGACGATTCCAAGCAAGTGAGCGAGGGTGGGATATTCGCTTTCAATAAAAGAGGCGACAAGATTATTGATGCGGATGTTGTGCGTGCCAAGCTTCAGGCGGAGTGCAAGCGGCTTGAATCTGAATCGAACGGGTACATGGTGAGGCAAGATGCAGTACTTGTTGCTAAACTCCAGCGCGAACGCGCAATCGATGCCTGTCTCCAAGTTGTGGAAGCTCGAAACACCGTTGTTGAGGACGCCACGGCCCGATCGGAAACATTTGTTGCGTGGGAGCAACTGCTTACCACCGTCGTTTCCAGAGGATTGTCGAGCATTGTCACTGCAATAGAGCTCCAGAGAGCTGTGGTGACGATGGCGAATGTGCCCGCAGACGAAGGGCCAATGAGCGCCCATAGCATCATATTCGAACTTGTGGACGGTGTTCTGGCCGGTATCTGTGAGGCCGAGCCGTTCGGAGGTGGTTCCGACGTCGCCAAGGCCGTGCCCTTCTGTCGACTGGTGCACACAATGCTCTCGCATCTTCGCCAGAGGGGCGAGGAAGACCGTTCGAAGAATGATACGAGCGTCTTCCTCGCGCCGTCAAAGTGCCGAGCCTTGCTGAGGAGTCTCATCGCGTGCTTACTGCATCGCTCACCTTTACCTCAAGCGTCAAGACAGGACATCATCAACGCCCTACTTGATTACCTGGCATACTGTAGGCCTGATGCGTTGGGCGTCAGTCCAGTGACGAAACAAGGGCAGACAATCTCTGGGTTGAGTGCATCCTTTTCGCAAGCGGCTGACGTTGATATCGAGAAAGCAAACGCCGCCATAATTCAGCGCGATGCGACTGCGCTGGTGGACGTTATATCTCGAGACGCTCTGGAGGGTTCAAATGATACCAAGGCAGTTGCCTTGGCTGCGCTCGAGGCGATGGTCACCGTGTGCGCACACACAGGTGGCGGTGGCATCGTCGTTCTTCTGCTGCAGAATGGTGTCGCTAAAGCATGTCTGCGTGAGCTGGAGCGAGTCTCCATGCCAGATTTGGTGCTGAATACACCTCGTGCCGCCTCTCAAATGAAGGCCATTGAGGCGTCTCTTTCGCTGCTCATGCGCATGGCGCAAAGCGAACCGGGTCAGATGATTGCACTGGGAACGCTTACTTCTTTGACCAACTGTCGCGCAATCGACGCATACGCCGACATCCATAGCGCTTCCGCGACTATGGCGACGATGTCCGTGGATAAGCCATACTCAGAGCTTCCGATCCCTCGAGCGAGACATCACAAGCTCCTCGTGAACGTCATTCGCCTCGCTAGAATTCTCCTTGCTTCAGATCTGCAGCCGAAAACACCGGTTTCACCGGTCTTGGCGCAGTACAAGGGGGGCGTTATCGAGAGCATTGGCTATCCATCAGTTGTGGCGCAAGTTTTGGAGTTCGTCGAGGCACACGCGGCAGTGATCCACCGCGTACTCGCGGACCGCGCCCCTCAACCACACCTCGCTGATTTGGCAGAGCTCGAGGTGACGGTCGACTTGGTGACGAGATTGCTCAAGGGTGGCATCACACCGGATCCGAAGCTTCGTCTGCACGGTGCGATCGACGTGCTCACCGCGATGATTTGCGGCGCCGAGGCGAACAAGTATTCAAAGTTCATTTCGAAAACTTTGGGGCACGCTGAGGCGGATGATGACGTGATGCTTGCTTCCTCGGACGACGCTCACGCGATCGACGCCGCTGAGCGTATGTTGGCACGATTCATCAACGTCCGAAGCATGGTTCTGAGTGCGCAGCGCGTACTCGTGAATAAAGGTCTGACCAAGTTCACGTTCTCTGTGTCCGATGGCGTCGTGGGCGATGAAAGGCCAACTGTTCATCTCTTCGGCACGCTCGTGATTGAGCTTTCGGGCGAACTCGATAGACTGTGTAGGGCGAGAAAATATGCGCTCAAATCAATCGAATACGGCTCAATTTTGCGAACTAGTGACGTGAGTGAGTCAGATTTGGTCGCCAAGGTGGCCTCGCTCGAGGCCGACATTCGTACCATAGTGATCAGCGCTGAAAACTCGCTAGAGATTTTGTACGCGCACCTTCACTCGTTGGTACAAAAGGGAGAGGACGACAGCCTTGTTGCACCCTCGGCGGAGCTCAGCGGTGGAAATGCGAAAACACACGAGTTGGGCATATTAGCCTCAGTCATGATTCCGAGCTTGCAAGCGCTCATCGAGTACGACAAATTGGTACTCGGGCTAGATACGGAGTTCTTAAACATGATTGCCACGCGTGTCAGGGACACCCTGGCGGCACCAAATAGTGGATCACTGCGGCAACGATTTGGAATTGCGTAA

Protein
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Locus ID: Ot06g03280
: Redo Blast
Protein Length: 1985 aminoacids
Protein Sequence: MFALPAATPTVAAAGPIASTSEPSSTKSGDGSSPASRFQHLLSALRRLELGRVSERDRERARAALRLNEKRLREAVFFEPRRAEDAAKVTSGTVTLSHGLEVRLGELDVEHASKIAVALDVNEIASVELIVGAIENGAPADDVVPSAVGIYMRERMAALESLLVVLRCADGSTPLDGGWFAFRHLVKLVTAPPPGGPFLVAPQQPQAGALVLTNAPTQPVGRALGPMDKLFDIRGRPMLRQECVAQERRLVVECLFHSARVSPSLSIENAQALLVLAGRSADAMKQLEKVAVEDVPTGYGSIFAAAAMFTPVKSGVESAMTKMELAKGVLSAINSPNAPPLFSFIRFAWATLGLDLGLPEAEESIRESLKNDGLEAIDLILKTGVFQDEHVAARSQNLMLVDTILSRYLHHNLRKTTLHRMLTDGTGVRAPFVENGVTIEIDPAKPMADLCSVFSEIYTQKPEMADGCSNLKSFLEIAGDSEHSVGSLVKLLDLCRTIAQTTEGSRRIFELLQRSQGAANWDRLLGALIGYVQRFMSSPDDLLDAGEEYDPRDGEPEMNEADAEGLRAYLSVFKAVMEHAERTDAAHWLMWLEHRIGASLMDALLQLYINPVPSSLKASLLDAISALCWDSNKASDVWQLLDQAGILPNPSQTGMLQTVQSQRCDILYIYSVVESQEQSYASTAAWLRLISKLLMITQDSELGPCSDACSPAWFHSRFIRERLFGELDTRVHKDQTERWRMARDCIDHFLFVLRTSENYPSISGMEDSGTPNIGAPLVISQGESSTALTIRNADQSQGVSDRSGTPGSDILLDFLTTGPTFRMVMNILSIGAEHLSFERNAPHGDALERCVLGSLQLLDYMMSIDVHAVRKLRVKNKEAFFYRTVDESLSADITLMANVLGYVQYKYSAEIPLAALKILRVLCSRIDHIVLVLPPVSRAALVEGCASCLELAFAMPPPGEGESIADENAQNAIECASLVFALLHENLTRPGTNLSHLLLGFDLTGASSEMALRPFSEFNCLSVLFELLEAAPPSMHASVVLPFEAPELAADLLHRLATLKSTAPPVLALLQQWPPHAPSAVLPDLLADALRTHLPDEPAKRRSVMHHRASILRLCAEVLDVESPPAKNRLPEMAPALVLDIMTVLLDNGREGLSTYAHDVNVEHGQFAVLELPKSITHLSGAHHEHAITANFGPEILETMEELSATQILDDSKQVSEGGIFAFNKRGDKIIDADVVRAKLQAECKRLESESNGYMVRQDAVLVAKLQRERAIDACLQVVEARNTVVEDATARSETFVAWEQLLTTVVSRGLSSIVTAIELQRAVVTMANVPADEGPMSAHSIIFELVDGVLAGICEAEPFGGGSDVAKAVPFCRLVHTMLSHLRQRGEEDRSKNDTSVFLAPSKCRALLRSLIACLLHRSPLPQASRQDIINALLDYLAYCRPDALGVSPVTKQGQTISGLSASFSQAADVDIEKANAAIIQRDATALVDVISRDALEGSNDTKAVALAALEAMVTVCAHTGGGGIVVLLLQNGVAKACLRELERVSMPDLVLNTPRAASQMKAIEASLSLLMRMAQSEPGQMIALGTLTSLTNCRAIDAYADIHSASATMATMSVDKPYSELPIPRARHHKLLVNVIRLARILLASDLQPKTPVSPVLAQYKGGVIESIGYPSVVAQVLEFVEAHAAVIHRVLADRAPQPHLADLAELEVTVDLVTRLLKGGITPDPKLRLHGAIDVLTAMICGAEANKYSKFISKTLGHAEADDDVMLASSDDAHAIDAAERMLARFINVRSMVLSAQRVLVNKGLTKFTFSVSDGVVGDERPTVHLFGTLVIELSGELDRLCRARKYALKSIEYGSILRTSDVSESDLVAKVASLEADIRTIVISAENSLEILYAHLHSLVQKGEDDSLVAPSAELSGGNAKTHELGILASVMIPSLQALIEYDKLVLGLDTEFLNMIATRVRDTLAAPNSGSLRQRFGIA*
Signal Peptide: n/a
Subcellular Localisation: n/a

Associated ESTs/cDNAs
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n/a

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Associated ESTs/cDNAs Top