- Gene ID
- Ot06g01080
- Locus
- Ot06g01080
- Functional Description
- Guanine nucleotide binding protein MIP1 (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom06
- Last Modified On
- 09 March 2010 3h08
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Guanine nucleotide binding protein MIP1 (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Domain ID | Description | Database |
IPR011046 |
WD40 repeat-like-containing domain |
InterPro |
IPR017986 |
WD40-repeat-containing domain |
InterPro |
IPR011989 |
Armadillo-like helical |
InterPro |
IPR015943 |
WD40/YVTN repeat-like-containing domain |
InterPro |
IPR001680 |
WD40 repeat |
InterPro |
IPR004083 |
Regulatory associated protein of TOR |
InterPro |
IPR016024 |
Armadillo-type fold |
InterPro |
IPR019781 |
WD40 repeat, subgroup |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
CAL53367.1 |
raptor1B (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 2855 Identities = 1466/1466 (100%), Positives = 1466/1466 (100%), Gaps = 0/1466 (0%) |
NCBI |
Show Blast
|
XP_001418167.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1137 Identities = 587/854 (68%), Positives = 654/854 (76%), Gaps = 112/854 (13%) |
NCBI |
Show Blast
|
AT3G08850.1 |
| Symbols: RAPTOR1B, ATRAPTOR1B | ATRAPTOR1B/RAPTOR1B (RAPTOR1); nucleotide binding / protein binding |
Evalue: 0.0 | Bitscore: 734 Identities = 408/836 (48%), Positives = 498/836 (59%), Gaps = 101/836 (12%) |
Tair |
Show Blast
|
EFA82813.1 |
WD40 repeat-containing protein [Polysphondylium pallidum PN500]
Evalue: 0.0 | Bitscore: 695 Identities = 370/740 (50%), Positives = 479/740 (64%), Gaps = 98/740 (13%) |
NCBI |
Show Blast
|
XP_001919288.1 |
PREDICTED: similar to raptor [Danio rerio]
Evalue: 0.0 | Bitscore: 679 Identities = 344/591 (58%), Positives = 420/591 (71%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
XP_426232.2 |
PREDICTED: similar to p150 target of rapamycin (TOR)-scaffold protein containing WD-repeats [Gallus gallus]
Evalue: 0.0 | Bitscore: 678 Identities = 344/591 (58%), Positives = 419/591 (70%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
XP_583606.4 |
PREDICTED: similar to raptor [Bos taurus]
Evalue: 0.0 | Bitscore: 674 Identities = 343/591 (58%), Positives = 418/591 (70%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
XP_001370890.1 |
PREDICTED: hypothetical protein [Monodelphis domestica]
Evalue: 0.0 | Bitscore: 674 Identities = 344/591 (58%), Positives = 419/591 (70%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
XP_850487.1 |
PREDICTED: similar to raptor [Canis familiaris]
Evalue: 0.0 | Bitscore: 674 Identities = 343/591 (58%), Positives = 418/591 (70%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
NP_001088177.1 |
hypothetical protein LOC495002 [Xenopus laevis]
Evalue: 0.0 | Bitscore: 673 Identities = 343/591 (58%), Positives = 419/591 (70%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
EAJ66640.1 |
unknown [environmental sequence]
Evalue: 1e-123 | Bitscore: 442 Identities = 221/324 (68%), Positives = 253/324 (78%), Gaps = 12/324 (3%) |
GOS |
Show Blast
|
EAH41861.1 |
unknown [environmental sequence]
Evalue: 5e-69 | Bitscore: 263 Identities = 134/299 (44%), Positives = 191/299 (63%), Gaps = 24/299 (8%) |
GOS |
Show Blast
|
EAD10144.1 |
unknown [environmental sequence]
Evalue: 1e-56 | Bitscore: 222 Identities = 118/205 (57%), Positives = 148/205 (72%), Gaps = 11/205 (5%) |
GOS |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
CAL53367.1 |
raptor1B (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 2855 Identities = 1466/1466 (100%), Positives = 1466/1466 (100%), Gaps = 0/1466 (0%) |
NCBI |
Show Blast
|
XP_001418167.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1137 Identities = 587/854 (68%), Positives = 654/854 (76%), Gaps = 112/854 (13%) |
NCBI |
Show Blast
|
EFA82813.1 |
WD40 repeat-containing protein [Polysphondylium pallidum PN500]
Evalue: 0.0 | Bitscore: 695 Identities = 370/740 (50%), Positives = 479/740 (64%), Gaps = 98/740 (13%) |
NCBI |
Show Blast
|
XP_001919288.1 |
PREDICTED: similar to raptor [Danio rerio]
Evalue: 0.0 | Bitscore: 679 Identities = 344/591 (58%), Positives = 420/591 (71%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
XP_426232.2 |
PREDICTED: similar to p150 target of rapamycin (TOR)-scaffold protein containing WD-repeats [Gallus gallus]
Evalue: 0.0 | Bitscore: 678 Identities = 344/591 (58%), Positives = 419/591 (70%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
XP_583606.4 |
PREDICTED: similar to raptor [Bos taurus]
Evalue: 0.0 | Bitscore: 674 Identities = 343/591 (58%), Positives = 418/591 (70%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
XP_001370890.1 |
PREDICTED: hypothetical protein [Monodelphis domestica]
Evalue: 0.0 | Bitscore: 674 Identities = 344/591 (58%), Positives = 419/591 (70%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
XP_850487.1 |
PREDICTED: similar to raptor [Canis familiaris]
Evalue: 0.0 | Bitscore: 674 Identities = 343/591 (58%), Positives = 418/591 (70%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
NP_001088177.1 |
hypothetical protein LOC495002 [Xenopus laevis]
Evalue: 0.0 | Bitscore: 673 Identities = 343/591 (58%), Positives = 419/591 (70%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
XP_001161716.1 |
PREDICTED: raptor isoform 1 [Pan troglodytes]
Evalue: 0.0 | Bitscore: 672 Identities = 341/591 (57%), Positives = 417/591 (70%), Gaps = 31/591 (5%) |
NCBI |
Show Blast
|
No hits found against database O.RCC809 with an e-value better than 1e-3. |
No hits found against database O.luci with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
Ot05g00460 |
chrom05.0001 [63305..63381,63477..64512] incomplete
Evalue: 0.0007 | Bitscore: 42 Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 15/211 (7%) |
Self |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
Q8K4Q0 |
Regulatory-associated protein of mTOR OS=Mus musculus GN=Rptor PE=1 SV=1
Evalue: 0.0 | Bitscore: 669 Identities = 328/591 (55%), Positives = 403/591 (68%), Gaps = 31/591 (5%) |
SwissP |
Show Blast
|
Q8N122 |
Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1 SV=1
Evalue: 0.0 | Bitscore: 669 Identities = 327/591 (55%), Positives = 403/591 (68%), Gaps = 31/591 (5%) |
SwissP |
Show Blast
|
P87141 |
WD repeat-containing protein mip1 OS=Schizosaccharomyces pombe GN=mip1 PE=1 SV=1
Evalue: 1e-155 | Bitscore: 549 Identities = 290/593 (48%), Positives = 385/593 (64%), Gaps = 44/593 (7%) |
SwissP |
Show Blast
|
Q55BR7 |
Protein raptor homolog OS=Dictyostelium discoideum GN=raptor PE=1 SV=1
Evalue: 1e-142 | Bitscore: 507 Identities = 257/524 (49%), Positives = 337/524 (64%), Gaps = 61/524 (11%) |
SwissP |
Show Blast
|
P38873 |
Target of rapamycin complex 1 subunit KOG1 OS=Saccharomyces cerevisiae GN=KOG1 PE=1 SV=2
Evalue: 6e-86 | Bitscore: 320 Identities = 161/362 (44%), Positives = 222/362 (61%), Gaps = 49/362 (13%) |
SwissP |
Show Blast
|
Q8YRI1 |
Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1
Evalue: 6e-09 | Bitscore: 64 Identities = 83/339 (24%), Positives = 150/339 (44%), Gaps = 49/339 (14%) |
SwissP |
Show Blast
|
Q5ZIU8 |
Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2
Evalue: 1e-06 | Bitscore: 57 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 19/208 (9%) |
SwissP |
Show Blast
|
Q8BG40 |
Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1
Evalue: 4e-06 | Bitscore: 55 Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 25/211 (11%) |
SwissP |
Show Blast
|
Q9BVA0 |
Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1
Evalue: 6e-06 | Bitscore: 54 Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 25/211 (11%) |
SwissP |
Show Blast
|
Q6NVM2 |
Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1
Evalue: 7e-06 | Bitscore: 54 Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 19/207 (9%) |
SwissP |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
AT3G08850.1 |
| Symbols: RAPTOR1B, ATRAPTOR1B | ATRAPTOR1B/RAPTOR1B (RAPTOR1); nucleotide binding / protein binding |
Evalue: 0.0 | Bitscore: 734 Identities = 408/836 (48%), Positives = 498/836 (59%), Gaps = 101/836 (12%) |
Tair |
Show Blast
|
AT5G01770.1 |
| Symbols: RAPTOR1A, ATRAPTOR1A | ATRAPTOR1A/RAPTOR1A (RAPTOR2); nucleotide binding | chr5:294536-301770 REVERSE
Evalue: 1e-180 | Bitscore: 628 Identities = 376/882 (42%), Positives = 476/882 (53%), Gaps = 191/882 (21%) |
Tair |
Show Blast
|
AT1G11160.1 |
| Symbols: | nucleotide binding | chr1:3733406-3739363 FORWARD
Evalue: 2e-05 | Bitscore: 49 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
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