- Gene ID
- Ot06g00430
- Locus
- Ot06g00430
- Functional Description
- anaphase promoting complex subunit 3 / cell division cycle prote (IC)
- Gene Type
- protein-coding gene
- Contig
- chrom06
- Last Modified On
- 09 March 2010 2h58
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
| Sorry, only history comparison allowed for non logged in users!! |
Compare this version with :
Go! |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- anaphase promoting complex subunit 3 / cell division cycle prote (IC)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
| Domain ID | Description | Database |
|---|
|
SSF48452 |
TPR-like |
superfamily |
|
IPR001440 |
Tetratricopeptide TPR-1 |
InterPro |
|
IPR011990 |
Tetratricopeptide-like helical |
InterPro |
|
PTHR12558 |
CELL DIVISION CYCLE 16,23,27 |
HMMPanther |
|
IPR013026 |
Tetratricopeptide repeat-containing |
InterPro |
|
IPR019734 |
Tetratricopeptide repeat |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53302.1 |
anaphase promoting complex subunit 3 / cell division cycle prote (IC) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1513
Identities = 772/772 (100%), Positives = 772/772 (100%), Gaps = 0/772 (0%) |
NCBI |
Show Blast
|
| AAV68622.1 |
cell division cycle protein 27/anaphase promoting complex subunit 3 [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 758
Identities = 372/376 (98%), Positives = 374/376 (99%), Gaps = 0/376 (0%) |
NCBI |
Show Blast
|
| XP_001418358.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-179 | Bitscore: 634
Identities = 307/376 (81%), Positives = 341/376 (90%), Gaps = 4/376 (1%) |
NCBI |
Show Blast
|
| EEH56226.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-131 | Bitscore: 473
Identities = 219/329 (66%), Positives = 267/329 (81%), Gaps = 0/329 (0%) |
NCBI |
Show Blast
|
| XP_002500364.1 |
anaphase promoting complex 3 [Micromonas sp. RCC299]
Evalue: 2e-126 | Bitscore: 458
Identities = 209/312 (66%), Positives = 259/312 (83%), Gaps = 0/312 (0%) |
NCBI |
Show Blast
|
| XP_001771285.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-108 | Bitscore: 397
Identities = 197/356 (55%), Positives = 259/356 (72%), Gaps = 0/356 (0%) |
NCBI |
Show Blast
|
| XP_001758114.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 1e-107 | Bitscore: 395
Identities = 192/325 (59%), Positives = 250/325 (76%), Gaps = 0/325 (0%) |
NCBI |
Show Blast
|
| XP_002324445.1 |
predicted protein [Populus trichocarpa]
Evalue: 1e-100 | Bitscore: 372
Identities = 177/325 (54%), Positives = 236/325 (72%), Gaps = 0/325 (0%) |
NCBI |
Show Blast
|
| AAD24396.1 |
CDC27/NUC2-like protein [Arabidopsis thaliana]
Evalue: 3e-99 | Bitscore: 367
Identities = 174/325 (53%), Positives = 232/325 (71%), Gaps = 0/325 (0%) |
NCBI |
Show Blast
|
| NP_849994.1 |
HBT (HOBBIT); binding [Arabidopsis thaliana]
Evalue: 8e-99 | Bitscore: 366
Identities = 174/325 (53%), Positives = 232/325 (71%), Gaps = 0/325 (0%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAD58012.1 |
unknown [environmental sequence]
Evalue: 4e-73 | Bitscore: 276
Identities = 135/195 (69%), Positives = 162/195 (83%) |
GOS |
Show Blast
|
| EAH59024.1 |
unknown [environmental sequence]
Evalue: 1e-16 | Bitscore: 88
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 34/236 (14%) |
GOS |
Show Blast
|
| EAE29565.1 |
unknown [environmental sequence]
Evalue: 8e-16 | Bitscore: 85
Identities = 56/226 (24%), Positives = 102/226 (45%) |
GOS |
Show Blast
|
| EAF71643.1 |
unknown [environmental sequence]
Evalue: 1e-15 | Bitscore: 84
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 1/227 (0%) |
GOS |
Show Blast
|
| EAK74435.1 |
unknown [environmental sequence]
Evalue: 2e-14 | Bitscore: 80
Identities = 51/200 (25%), Positives = 94/200 (47%) |
GOS |
Show Blast
|
| EAJ89732.1 |
unknown [environmental sequence]
Evalue: 4e-13 | Bitscore: 76
Identities = 46/184 (25%), Positives = 88/184 (47%) |
GOS |
Show Blast
|
| EAB99091.1 |
unknown [environmental sequence]
Evalue: 1e-12 | Bitscore: 75
Identities = 44/195 (22%), Positives = 98/195 (50%), Gaps = 2/195 (1%) |
GOS |
Show Blast
|
| EAG82299.1 |
unknown [environmental sequence]
Evalue: 1e-12 | Bitscore: 75
Identities = 51/225 (22%), Positives = 105/225 (46%) |
GOS |
Show Blast
|
| EAG95629.1 |
unknown [environmental sequence]
Evalue: 2e-12 | Bitscore: 73
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 1/219 (0%) |
GOS |
Show Blast
|
| EAB28650.1 |
unknown [environmental sequence]
Evalue: 3e-12 | Bitscore: 73
Identities = 39/156 (25%), Positives = 76/156 (48%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53302.1 |
anaphase promoting complex subunit 3 / cell division cycle prote (IC) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1513
Identities = 772/772 (100%), Positives = 772/772 (100%), Gaps = 0/772 (0%) |
NCBI |
Show Blast
|
| AAV68622.1 |
cell division cycle protein 27/anaphase promoting complex subunit 3 [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 758
Identities = 372/376 (98%), Positives = 374/376 (99%), Gaps = 0/376 (0%) |
NCBI |
Show Blast
|
| XP_001418358.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-179 | Bitscore: 634
Identities = 307/376 (81%), Positives = 341/376 (90%), Gaps = 4/376 (1%) |
NCBI |
Show Blast
|
| EEH56226.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-131 | Bitscore: 473
Identities = 219/329 (66%), Positives = 267/329 (81%), Gaps = 0/329 (0%) |
NCBI |
Show Blast
|
| XP_002500364.1 |
anaphase promoting complex 3 [Micromonas sp. RCC299]
Evalue: 2e-126 | Bitscore: 458
Identities = 209/312 (66%), Positives = 259/312 (83%), Gaps = 0/312 (0%) |
NCBI |
Show Blast
|
| XP_001771285.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-108 | Bitscore: 397
Identities = 197/356 (55%), Positives = 259/356 (72%), Gaps = 0/356 (0%) |
NCBI |
Show Blast
|
| XP_001758114.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 1e-107 | Bitscore: 395
Identities = 192/325 (59%), Positives = 250/325 (76%), Gaps = 0/325 (0%) |
NCBI |
Show Blast
|
| XP_002324445.1 |
predicted protein [Populus trichocarpa]
Evalue: 1e-100 | Bitscore: 372
Identities = 177/325 (54%), Positives = 236/325 (72%), Gaps = 0/325 (0%) |
NCBI |
Show Blast
|
| AAD24396.1 |
CDC27/NUC2-like protein [Arabidopsis thaliana]
Evalue: 3e-99 | Bitscore: 367
Identities = 174/325 (53%), Positives = 232/325 (71%), Gaps = 0/325 (0%) |
NCBI |
Show Blast
|
| NP_849994.1 |
HBT (HOBBIT); binding [Arabidopsis thaliana]
Evalue: 8e-99 | Bitscore: 366
Identities = 174/325 (53%), Positives = 232/325 (71%), Gaps = 0/325 (0%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot07g02350 |
chrom07.0001 [376386..378095]
Evalue: 5e-33 | Bitscore: 137
Identities = 94/330 (28%), Positives = 172/330 (52%), Gaps = 19/330 (5%) |
Self |
Show Blast
|
| Ot01g01010 |
chrom01.0001 [146415..147904,147937..147979]
Evalue: 3e-11 | Bitscore: 65
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 5/224 (2%) |
Self |
Show Blast
|
| Ot12g03020 |
chrom12.0001 [478820..481660]
Evalue: 2e-06 | Bitscore: 49
Identities = 55/257 (21%), Positives = 93/257 (36%), Gaps = 55/257 (21%) |
Self |
Show Blast
|
| Ot05g02670 |
chrom05.0001 [408594..410417]
Evalue: 4e-06 | Bitscore: 48
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 5/184 (2%) |
Self |
Show Blast
|
| Ot04g00920 |
chrom04.0001 [132810..135668,135715..137280] incomplete
Evalue: 0.0002 | Bitscore: 43
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 2/156 (1%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| P30260 |
Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27 PE=1 SV=2
Evalue: 9e-95 | Bitscore: 348
Identities = 152/320 (47%), Positives = 232/320 (72%), Gaps = 1/320 (0%) |
SwissP |
Show Blast
|
| A7Z061 |
Cell division cycle protein 27 homolog OS=Bos taurus GN=CDC27 PE=2 SV=1
Evalue: 1e-94 | Bitscore: 348
Identities = 152/320 (47%), Positives = 232/320 (72%), Gaps = 1/320 (0%) |
SwissP |
Show Blast
|
| A2A6Q5 |
Cell division cycle protein 27 homolog OS=Mus musculus GN=Cdc27 PE=2 SV=1
Evalue: 1e-93 | Bitscore: 344
Identities = 150/320 (46%), Positives = 232/320 (72%), Gaps = 1/320 (0%) |
SwissP |
Show Blast
|
| Q4V8A2 |
Cell division cycle protein 27 homolog OS=Rattus norvegicus GN=Cdc27 PE=2 SV=1
Evalue: 2e-93 | Bitscore: 343
Identities = 150/320 (46%), Positives = 232/320 (72%), Gaps = 1/320 (0%) |
SwissP |
Show Blast
|
| Q54J83 |
Anaphase-promoting complex subunit 3 OS=Dictyostelium discoideum GN=anapc3 PE=3 SV=1
Evalue: 3e-92 | Bitscore: 340
Identities = 153/328 (46%), Positives = 233/328 (71%), Gaps = 5/328 (1%) |
SwissP |
Show Blast
|
| P17885 |
Protein bimA OS=Emericella nidulans GN=bimA PE=2 SV=1
Evalue: 8e-83 | Bitscore: 308
Identities = 248/816 (30%), Positives = 367/816 (44%), Gaps = 118/816 (14%) |
SwissP |
Show Blast
|
| P10505 |
Anaphase-promoting complex subunit 3 OS=Schizosaccharomyces pombe GN=nuc2 PE=1 SV=3
Evalue: 3e-72 | Bitscore: 273
Identities = 136/319 (42%), Positives = 205/319 (64%), Gaps = 2/319 (0%) |
SwissP |
Show Blast
|
| P38042 |
Anaphase-promoting complex subunit CDC27 OS=Saccharomyces cerevisiae GN=CDC27 PE=1 SV=1
Evalue: 9e-54 | Bitscore: 212
Identities = 107/303 (35%), Positives = 173/303 (57%), Gaps = 2/303 (0%) |
SwissP |
Show Blast
|
| Q86B11 |
Anaphase-promoting complex subunit 8 OS=Dictyostelium discoideum GN=anapc8 PE=3 SV=1
Evalue: 4e-33 | Bitscore: 144
Identities = 83/277 (29%), Positives = 149/277 (53%), Gaps = 25/277 (9%) |
SwissP |
Show Blast
|
| Q9UJX2 |
Cell division cycle protein 23 homolog OS=Homo sapiens GN=CDC23 PE=1 SV=3
Evalue: 7e-31 | Bitscore: 136
Identities = 84/285 (29%), Positives = 152/285 (53%), Gaps = 10/285 (3%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT2G20000.1 |
| Symbols: HBT | HBT (HOBBIT); binding | chr2:8639405-8643981 REVERSE
Evalue: 6e-99 | Bitscore: 358
Identities = 174/325 (53%), Positives = 232/325 (71%) |
Tair |
Show Blast
|
| AT3G16320.1 |
| Symbols: | binding | chr3:5529540-5534471 FORWARD
Evalue: 5e-93 | Bitscore: 339
Identities = 160/325 (49%), Positives = 231/325 (71%) |
Tair |
Show Blast
|
| AT3G48150.1 |
| Symbols: CDC23, APC8 | APC8 (anaphase-promoting complex/cyclosome 8); binding | chr3:17790785-17793550 REVERSE
Evalue: 9e-27 | Bitscore: 119
Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 23/288 (7%) |
Tair |
Show Blast
|
| AT3G04240.1 |
| Symbols: SEC | SEC (SECRET AGENT); transferase, transferring glycosyl groups | chr3:1114194-1120729 REVERSE
Evalue: 2e-10 | Bitscore: 64
Identities = 65/310 (20%), Positives = 129/310 (41%), Gaps = 44/310 (14%) |
Tair |
Show Blast
|
| AT5G56290.1 |
| Symbols: PEX5 | PEX5 (PEROXIN 5); peroxisome matrix targeting signal-1 binding | chr5:22803881-22809198 FORWARD
Evalue: 2e-07 | Bitscore: 54
Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 22/244 (9%) |
Tair |
Show Blast
|
| AT4G37460.1 |
| Symbols: | binding | chr4:17608617-17615528 REVERSE
Evalue: 1e-06 | Bitscore: 52
Identities = 60/289 (20%), Positives = 116/289 (40%), Gaps = 30/289 (10%) |
Tair |
Show Blast
|
| AT2G39090.1 |
| Symbols: | tetratricopeptide repeat (TPR)-containing protein | chr2:16319849-16324311 REVERSE
Evalue: 3e-06 | Bitscore: 51
Identities = 69/304 (22%), Positives = 136/304 (44%), Gaps = 12/304 (3%) |
Tair |
Show Blast
|
| AT3G11540.1 |
| Symbols: SPY | SPY (SPINDLY); transferase, transferring glycosyl groups | chr3:3632848-3637553 FORWARD
Evalue: 4e-06 | Bitscore: 50
Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 18/236 (7%) |
Tair |
Show Blast
|
| AT1G78770.1 |
| Symbols: | cell division cycle family protein | chr1:29622314-29626166 FORWARD
Evalue: 4e-06 | Bitscore: 50
Identities = 30/129 (23%), Positives = 61/129 (47%) |
Tair |
Show Blast
|
| AT2G39090.2 |
| Symbols: | tetratricopeptide repeat (TPR)-containing protein | chr2:16320165-16324311 REVERSE
Evalue: 0.0001 | Bitscore: 45
Identities = 65/286 (22%), Positives = 128/286 (44%), Gaps = 12/286 (4%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | OtEST03257 |
Support Model | N |
More Info |
| Comment | EST is inconsistent with the given gene model. |
| Mapping Location | 58313..59590 |
Strand - |
|
