- Gene ID
- Ot05g05120
- Locus
- Ot05g05120
- Functional Description
- unnamed product
- Gene Type
- protein-coding gene
- Contig
- chrom05
- Last Modified On
- 09 March 2010 2h49
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- unnamed product
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL54267.1 |
Mg-chelatase subunit (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1286
Identities = 742/742 (100%), Positives = 742/742 (100%), Gaps = 0/742 (0%) |
NCBI |
Show Blast
|
| XP_002508833.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 941
Identities = 527/696 (75%), Positives = 602/696 (86%), Gaps = 5/696 (0%) |
NCBI |
Show Blast
|
| XP_001764245.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 786
Identities = 424/679 (62%), Positives = 549/679 (80%), Gaps = 4/679 (0%) |
NCBI |
Show Blast
|
| XP_002466225.1 |
hypothetical protein SORBIDRAFT_01g003860 [Sorghum bicolor]
Evalue: 0.0 | Bitscore: 781
Identities = 429/666 (64%), Positives = 538/666 (80%), Gaps = 4/666 (0%) |
NCBI |
Show Blast
|
| O22437 |
Magnesium-chelatase subunit chlD, chloroplastic OS=Pisum sativum GN=CHLD PE=2 SV=1
Evalue: 0.0 | Bitscore: 746
Identities = 396/666 (59%), Positives = 485/666 (72%), Gaps = 3/666 (0%) |
SwissP |
Show Blast
|
| O24133 |
Magnesium-chelatase subunit chlD, chloroplastic OS=Nicotiana tabacum GN=CHLD PE=2 SV=1
Evalue: 0.0 | Bitscore: 736
Identities = 394/671 (58%), Positives = 481/671 (71%), Gaps = 6/671 (0%) |
SwissP |
Show Blast
|
| Q9SJE1 |
Magnesium-chelatase subunit chlD, chloroplastic OS=Arabidopsis thaliana GN=CHLD PE=2 SV=3
Evalue: 0.0 | Bitscore: 734
Identities = 394/670 (58%), Positives = 484/670 (72%), Gaps = 5/670 (0%) |
SwissP |
Show Blast
|
| AT1G08520.1 |
| Symbols: PDE166, CHLD | CHLD/PDE166 (PIGMENT DEFECTIVE 166); magnesium chelatase/ nucleoside-triphosphatase/
Evalue: 0.0 | Bitscore: 734
Identities = 394/670 (58%), Positives = 484/670 (72%), Gaps = 5/670 (0%) |
Tair |
Show Blast
|
| EAI07709.1 |
unknown [environmental sequence]
Evalue: 0.0 | Bitscore: 727
Identities = 397/507 (78%), Positives = 411/507 (81%), Gaps = 2/507 (0%) |
GOS |
Show Blast
|
| P72772 |
Magnesium-chelatase subunit chlD OS=Synechocystis sp. (strain PCC 6803) GN=chlD PE=3 SV=1
Evalue: 0.0 | Bitscore: 650
Identities = 346/665 (52%), Positives = 451/665 (67%), Gaps = 12/665 (1%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAI07709.1 |
unknown [environmental sequence]
Evalue: 0.0 | Bitscore: 727
Identities = 397/507 (78%), Positives = 411/507 (81%), Gaps = 2/507 (0%) |
GOS |
Show Blast
|
| EAK68478.1 |
unknown [environmental sequence]
Evalue: 1e-145 | Bitscore: 516
Identities = 288/621 (46%), Positives = 392/621 (63%), Gaps = 43/621 (6%) |
GOS |
Show Blast
|
| EAJ91950.1 |
unknown [environmental sequence]
Evalue: 1e-140 | Bitscore: 498
Identities = 276/598 (46%), Positives = 378/598 (63%), Gaps = 28/598 (4%) |
GOS |
Show Blast
|
| EAI41159.1 |
unknown [environmental sequence]
Evalue: 2e-97 | Bitscore: 356
Identities = 209/480 (43%), Positives = 286/480 (59%), Gaps = 22/480 (4%) |
GOS |
Show Blast
|
| EAI40390.1 |
unknown [environmental sequence]
Evalue: 6e-90 | Bitscore: 332
Identities = 191/426 (44%), Positives = 257/426 (60%), Gaps = 16/426 (3%) |
GOS |
Show Blast
|
| EAJ19219.1 |
unknown [environmental sequence]
Evalue: 3e-83 | Bitscore: 309
Identities = 164/322 (50%), Positives = 217/322 (67%), Gaps = 8/322 (2%) |
GOS |
Show Blast
|
| EAK53977.1 |
unknown [environmental sequence]
Evalue: 6e-81 | Bitscore: 301
Identities = 163/346 (47%), Positives = 226/346 (65%), Gaps = 30/346 (8%) |
GOS |
Show Blast
|
| EAJ66553.1 |
unknown [environmental sequence]
Evalue: 3e-79 | Bitscore: 296
Identities = 161/292 (55%), Positives = 211/292 (72%), Gaps = 10/292 (3%) |
GOS |
Show Blast
|
| EAJ90311.1 |
unknown [environmental sequence]
Evalue: 2e-78 | Bitscore: 293
Identities = 160/292 (54%), Positives = 212/292 (72%), Gaps = 10/292 (3%) |
GOS |
Show Blast
|
| EAG57820.1 |
unknown [environmental sequence]
Evalue: 1e-77 | Bitscore: 291
Identities = 152/281 (54%), Positives = 207/281 (73%), Gaps = 6/281 (2%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL54267.1 |
Mg-chelatase subunit (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1286
Identities = 742/742 (100%), Positives = 742/742 (100%), Gaps = 0/742 (0%) |
NCBI |
Show Blast
|
| XP_002508833.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 941
Identities = 527/696 (75%), Positives = 602/696 (86%), Gaps = 5/696 (0%) |
NCBI |
Show Blast
|
| XP_001764245.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 786
Identities = 424/679 (62%), Positives = 549/679 (80%), Gaps = 4/679 (0%) |
NCBI |
Show Blast
|
| XP_002466225.1 |
hypothetical protein SORBIDRAFT_01g003860 [Sorghum bicolor]
Evalue: 0.0 | Bitscore: 781
Identities = 429/666 (64%), Positives = 538/666 (80%), Gaps = 4/666 (0%) |
NCBI |
Show Blast
|
| XP_001418124.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 7e-168 | Bitscore: 595
Identities = 303/324 (93%), Positives = 318/324 (98%), Gaps = 1/324 (0%) |
NCBI |
Show Blast
|
| EEH56642.1 |
magnesium-chelatase subunit chlD chloroplast precursor [Micromonas pusilla CCMP1545]
Evalue: 1e-139 | Bitscore: 501
Identities = 256/327 (78%), Positives = 290/327 (88%), Gaps = 1/327 (0%) |
NCBI |
Show Blast
|
| XP_002274874.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 1e-120 | Bitscore: 438
Identities = 225/346 (65%), Positives = 275/346 (79%), Gaps = 5/346 (1%) |
NCBI |
Show Blast
|
| O22437 |
RecName: Full=Magnesium-chelatase subunit chlD, chloroplastic; Short=Mg-chelatase subunit D; AltName: Full=Mg-protoporphyrin
Evalue: 1e-119 | Bitscore: 435
Identities = 218/322 (67%), Positives = 268/322 (83%), Gaps = 1/322 (0%) |
NCBI |
Show Blast
|
| XP_002513534.1 |
Magnesium-chelatase subunit chlD, chloroplast precursor, putative [Ricinus communis]
Evalue: 1e-119 | Bitscore: 435
Identities = 223/334 (66%), Positives = 268/334 (80%), Gaps = 1/334 (0%) |
NCBI |
Show Blast
|
| O24133 |
RecName: Full=Magnesium-chelatase subunit chlD, chloroplastic; Short=Mg-chelatase subunit D; AltName: Full=Mg-protoporphyrin
Evalue: 5e-118 | Bitscore: 429
Identities = 217/323 (67%), Positives = 263/323 (81%), Gaps = 1/323 (0%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot15g01280 |
chrom15.0001 [208907..210895]
Evalue: 3e-54 | Bitscore: 208
Identities = 122/259 (47%), Positives = 161/259 (62%), Gaps = 10/259 (3%) |
Self |
Show Blast
|
| Ot01g05570 |
chrom01.0001 [913378..914493] incomplete
Evalue: 2e-48 | Bitscore: 189
Identities = 109/310 (35%), Positives = 169/310 (54%), Gaps = 3/310 (0%) |
Self |
Show Blast
|
| Ot02g04440 |
chrom02.0001 [480712..480760,481113..482221] inframe stop codon incomplete
Evalue: 2e-48 | Bitscore: 189
Identities = 110/271 (40%), Positives = 156/271 (57%), Gaps = 5/271 (1%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| O22437 |
Magnesium-chelatase subunit chlD, chloroplastic OS=Pisum sativum GN=CHLD PE=2 SV=1
Evalue: 0.0 | Bitscore: 746
Identities = 396/666 (59%), Positives = 485/666 (72%), Gaps = 3/666 (0%) |
SwissP |
Show Blast
|
| O24133 |
Magnesium-chelatase subunit chlD, chloroplastic OS=Nicotiana tabacum GN=CHLD PE=2 SV=1
Evalue: 0.0 | Bitscore: 736
Identities = 394/671 (58%), Positives = 481/671 (71%), Gaps = 6/671 (0%) |
SwissP |
Show Blast
|
| Q9SJE1 |
Magnesium-chelatase subunit chlD, chloroplastic OS=Arabidopsis thaliana GN=CHLD PE=2 SV=3
Evalue: 0.0 | Bitscore: 734
Identities = 394/670 (58%), Positives = 484/670 (72%), Gaps = 5/670 (0%) |
SwissP |
Show Blast
|
| P72772 |
Magnesium-chelatase subunit chlD OS=Synechocystis sp. (strain PCC 6803) GN=chlD PE=3 SV=1
Evalue: 0.0 | Bitscore: 650
Identities = 346/665 (52%), Positives = 451/665 (67%), Gaps = 12/665 (1%) |
SwissP |
Show Blast
|
| O07345 |
Magnesium-chelatase subunit chlD OS=Synechococcus elongatus (strain PCC 7942) GN=chlD PE=3 SV=2
Evalue: 0.0 | Bitscore: 637
Identities = 351/670 (52%), Positives = 460/670 (68%), Gaps = 21/670 (3%) |
SwissP |
Show Blast
|
| Q9ZGE6 |
Magnesium-chelatase 67 kDa subunit OS=Heliobacillus mobilis GN=bchD PE=3 SV=1
Evalue: 1e-121 | Bitscore: 436
Identities = 264/667 (39%), Positives = 376/667 (56%), Gaps = 27/667 (4%) |
SwissP |
Show Blast
|
| Q58321 |
Magnesium-chelatase subunit chlI homolog OS=Methanocaldococcus jannaschii GN=MJ0911 PE=3 SV=1
Evalue: 1e-55 | Bitscore: 218
Identities = 121/320 (37%), Positives = 184/320 (57%), Gaps = 6/320 (1%) |
SwissP |
Show Blast
|
| P51394 |
Magnesium-chelatase subunit chlI OS=Porphyra purpurea GN=chlI PE=3 SV=1
Evalue: 2e-53 | Bitscore: 211
Identities = 124/328 (37%), Positives = 184/328 (56%), Gaps = 5/328 (1%) |
SwissP |
Show Blast
|
| Q9MUT3 |
Magnesium-chelatase subunit chlI OS=Mesostigma viride GN=chlI PE=3 SV=1
Evalue: 2e-53 | Bitscore: 211
Identities = 128/320 (40%), Positives = 185/320 (57%), Gaps = 5/320 (1%) |
SwissP |
Show Blast
|
| Q1XD93 |
Magnesium-chelatase subunit chlI OS=Porphyra yezoensis GN=chlI PE=3 SV=1
Evalue: 1e-52 | Bitscore: 208
Identities = 126/333 (37%), Positives = 180/333 (54%), Gaps = 5/333 (1%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT1G08520.1 |
| Symbols: PDE166, CHLD | CHLD/PDE166 (PIGMENT DEFECTIVE 166); magnesium chelatase/ nucleoside-triphosphatase/
Evalue: 0.0 | Bitscore: 734
Identities = 394/670 (58%), Positives = 484/670 (72%), Gaps = 5/670 (0%) |
Tair |
Show Blast
|
| AT5G45930.1 |
| Symbols: CHL I2, CHLI-2, CHLI2 | CHLI2; magnesium chelatase | chr5:18645322-18646792 FORWARD
Evalue: 6e-52 | Bitscore: 202
Identities = 125/326 (38%), Positives = 178/326 (54%), Gaps = 4/326 (1%) |
Tair |
Show Blast
|
| AT4G18480.1 |
| Symbols: CH42, CH-42, CHL11, CHLI-1, CHLI1 | CHLI1 (CHLORINA 42); magnesium chelatase | chr4:10201908-10203372 REVERSE
Evalue: 6e-49 | Bitscore: 192
Identities = 115/316 (36%), Positives = 169/316 (53%), Gaps = 3/316 (0%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
