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Ostreococcus tauri


Gene ID
Ot05g03030
Locus
Ot05g03030
Functional Description
putative dihydrolipoamide S-acetyltransferase (ISS)
Gene Type
protein-coding gene
Contig
chrom05
Last Modified On
09 March 2010 2h17
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
putative dihydrolipoamide S-acetyltransferase (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
n/a
Biological Process
1.
metabolic process

 
Comment
Unknown GO IDs: GO:0008415

Protein Domains 


Domain IDDescriptionDatabase
PTHR23151 DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED HMMPanther
IPR004167 E3 binding InterPro
IPR006257 Dihydrolipoamide acetyltransferase, long form InterPro
G3DSA:3.30.559.10 no description Gene3D
IPR011053 Single hybrid motif InterPro
IPR000089 Biotin/lipoyl attachment InterPro
SSF52777 CoA-dependent acyltransferases superfamily
IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site InterPro
G3DSA:2.40.50.100 no description Gene3D
IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL54058.1 putative dihydrolipoamide S-acetyltransferase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 844
Identities = 485/485 (100%), Positives = 485/485 (100%), Gaps = 0/485 (0%)
NCBI
Show Blast
XP_001418025.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 638
Identities = 327/430 (76%), Positives = 361/430 (83%), Gaps = 10/430 (2%)
NCBI
Show Blast
EAI87375.1 unknown [environmental sequence]
Evalue: 1e-170 | Bitscore: 597
Identities = 317/440 (72%), Positives = 354/440 (80%), Gaps = 4/440 (0%)
GOS
Show Blast
XP_002508519.1 dihydrolipoamide s-acetyltransferase of the pyruvate dehydrogenase [Micromonas sp. RCC299]
Evalue: 2e-129 | Bitscore: 467
Identities = 247/432 (57%), Positives = 302/432 (69%), Gaps = 34/432 (7%)
NCBI
Show Blast
EEH58926.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 7e-126 | Bitscore: 455
Identities = 252/449 (56%), Positives = 318/449 (70%), Gaps = 10/449 (2%)
NCBI
Show Blast
NP_001056555.1 Os06g0105400 [Oryza sativa (japonica cultivar-group)]
Evalue: 2e-106 | Bitscore: 390
Identities = 208/447 (46%), Positives = 287/447 (64%), Gaps = 12/447 (2%)
NCBI
Show Blast
XP_002128829.1 PREDICTED: similar to Dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) [Ciona intestinalis]
Evalue: 4e-106 | Bitscore: 389
Identities = 215/443 (48%), Positives = 289/443 (65%), Gaps = 12/443 (2%)
NCBI
Show Blast
EEC79834.1 hypothetical protein OsI_21298 [Oryza sativa Indica Group]
Evalue: 2e-104 | Bitscore: 384
Identities = 206/447 (46%), Positives = 287/447 (64%), Gaps = 17/447 (3%)
NCBI
Show Blast
NP_566470.1 dihydrolipoamide S-acetyltransferase, putative [Arabidopsis thaliana] sp|Q8RWN9.2|OPD22_ARATH RecName: Full=Dihydrolipoyllysine-residue acetyltransfer
Evalue: 9e-104 | Bitscore: 381
Identities = 211/443 (47%), Positives = 290/443 (65%), Gaps = 9/443 (2%)
NCBI
Show Blast
BAB02323.1 dihydrolipoamide acetyltransferase [Arabidopsis thaliana]
Evalue: 4e-103 | Bitscore: 379
Identities = 209/439 (47%), Positives = 288/439 (65%), Gaps = 9/439 (2%)
NCBI
Show Blast

Gene Structure 

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Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

CDS  

Locus ID
Ot05g03030
Redo Blast
CDS Length
1512 nucleotides
CDS Sequence

Protein 

Locus ID
Ot05g03030
Redo Blast
Protein Length
504 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

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EST IDOtEST00422 Support ModelY More Info