- Gene ID
- Ot05g02510
- Locus
- Ot05g02510
- Functional Description
- Ubiquitin C-terminal hydrolase UCHL1 (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom05
- Last Modified On
- 09 March 2010 2h07
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Ubiquitin C-terminal hydrolase UCHL1 (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
1.
intracellular anatomical structure
- Molecular Function
-
1.
obsolete ubiquitin thiolesterase activity
- Biological Process
-
1.
ubiquitin-dependent protein catabolic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR001578 |
Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 |
InterPro |
|
SSF54001 |
Cysteine proteinases |
superfamily |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL54006.1 |
Ubiquitin C-terminal hydrolase UCHL1 (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 652
Identities = 318/318 (100%), Positives = 318/318 (100%), Gaps = 0/318 (0%) |
NCBI |
Show Blast
|
| XP_001418005.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-109 | Bitscore: 398
Identities = 197/309 (63%), Positives = 237/309 (76%), Gaps = 9/309 (2%) |
NCBI |
Show Blast
|
| EAD64681.1 |
unknown [environmental sequence]
Evalue: 3e-91 | Bitscore: 334
Identities = 163/228 (71%), Positives = 193/228 (84%), Gaps = 5/228 (2%) |
GOS |
Show Blast
|
| EEH59031.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 3e-83 | Bitscore: 312
Identities = 166/347 (47%), Positives = 221/347 (63%), Gaps = 43/347 (12%) |
NCBI |
Show Blast
|
| EAH47353.1 |
unknown [environmental sequence]
Evalue: 5e-84 | Bitscore: 310
Identities = 151/213 (70%), Positives = 178/213 (83%), Gaps = 5/213 (2%) |
GOS |
Show Blast
|
| EEY55577.1 |
ubiquitin carboxyl-terminal hydrolase, putative [Phytophthora infestans T30-4]
Evalue: 8e-82 | Bitscore: 307
Identities = 165/317 (52%), Positives = 210/317 (66%), Gaps = 8/317 (2%) |
NCBI |
Show Blast
|
| XP_002502530.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-80 | Bitscore: 303
Identities = 156/332 (46%), Positives = 210/332 (63%), Gaps = 40/332 (12%) |
NCBI |
Show Blast
|
| XP_001754802.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 6e-75 | Bitscore: 285
Identities = 153/325 (47%), Positives = 208/325 (64%), Gaps = 23/325 (7%) |
NCBI |
Show Blast
|
| NP_001048557.1 |
Os02g0822200 [Oryza sativa (japonica cultivar-group)]
Evalue: 1e-74 | Bitscore: 284
Identities = 149/330 (45%), Positives = 208/330 (63%), Gaps = 20/330 (6%) |
NCBI |
Show Blast
|
| CBI37478.1 |
unnamed protein product [Vitis vinifera]
Evalue: 3e-74 | Bitscore: 282
Identities = 147/310 (47%), Positives = 200/310 (64%), Gaps = 7/310 (2%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAD64681.1 |
unknown [environmental sequence]
Evalue: 3e-91 | Bitscore: 334
Identities = 163/228 (71%), Positives = 193/228 (84%), Gaps = 5/228 (2%) |
GOS |
Show Blast
|
| EAH47353.1 |
unknown [environmental sequence]
Evalue: 5e-84 | Bitscore: 310
Identities = 151/213 (70%), Positives = 178/213 (83%), Gaps = 5/213 (2%) |
GOS |
Show Blast
|
| EAB68547.1 |
unknown [environmental sequence]
Evalue: 3e-25 | Bitscore: 115
Identities = 62/115 (53%), Positives = 80/115 (69%), Gaps = 4/115 (3%) |
GOS |
Show Blast
|
| EAD88018.1 |
unknown [environmental sequence]
Evalue: 2e-08 | Bitscore: 59
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 10/151 (6%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL54006.1 |
Ubiquitin C-terminal hydrolase UCHL1 (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 652
Identities = 318/318 (100%), Positives = 318/318 (100%), Gaps = 0/318 (0%) |
NCBI |
Show Blast
|
| XP_001418005.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-109 | Bitscore: 398
Identities = 197/309 (63%), Positives = 237/309 (76%), Gaps = 9/309 (2%) |
NCBI |
Show Blast
|
| EEH59031.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 3e-83 | Bitscore: 312
Identities = 166/347 (47%), Positives = 221/347 (63%), Gaps = 43/347 (12%) |
NCBI |
Show Blast
|
| EEY55577.1 |
ubiquitin carboxyl-terminal hydrolase, putative [Phytophthora infestans T30-4]
Evalue: 8e-82 | Bitscore: 307
Identities = 165/317 (52%), Positives = 210/317 (66%), Gaps = 8/317 (2%) |
NCBI |
Show Blast
|
| XP_002502530.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-80 | Bitscore: 303
Identities = 156/332 (46%), Positives = 210/332 (63%), Gaps = 40/332 (12%) |
NCBI |
Show Blast
|
| XP_001754802.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 6e-75 | Bitscore: 285
Identities = 153/325 (47%), Positives = 208/325 (64%), Gaps = 23/325 (7%) |
NCBI |
Show Blast
|
| NP_001048557.1 |
Os02g0822200 [Oryza sativa (japonica cultivar-group)]
Evalue: 1e-74 | Bitscore: 284
Identities = 149/330 (45%), Positives = 208/330 (63%), Gaps = 20/330 (6%) |
NCBI |
Show Blast
|
| CBI37478.1 |
unnamed protein product [Vitis vinifera]
Evalue: 3e-74 | Bitscore: 282
Identities = 147/310 (47%), Positives = 200/310 (64%), Gaps = 7/310 (2%) |
NCBI |
Show Blast
|
| XP_001747155.1 |
hypothetical protein [Monosiga brevicollis MX1]
Evalue: 4e-74 | Bitscore: 282
Identities = 141/311 (45%), Positives = 206/311 (66%), Gaps = 15/311 (4%) |
NCBI |
Show Blast
|
| XP_002519365.1 |
ubiquitin carboxyl-terminal hydrolase isozyme L5, putative [Ricinus communis]
Evalue: 1e-73 | Bitscore: 280
Identities = 155/340 (45%), Positives = 214/340 (62%), Gaps = 30/340 (8%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot09g03910 |
chrom09.0001 [588795..590992,591041..591063,591155..591869,
Evalue: 2e-16 | Bitscore: 81
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 15/226 (6%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q9Y5K5 |
Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Homo sapiens GN=UCHL5 PE=1 SV=3
Evalue: 1e-68 | Bitscore: 260
Identities = 141/320 (44%), Positives = 207/320 (64%), Gaps = 19/320 (5%) |
SwissP |
Show Blast
|
| Q9XSJ0 |
Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Bos taurus GN=UCHL5 PE=2 SV=1
Evalue: 1e-68 | Bitscore: 259
Identities = 141/319 (44%), Positives = 206/319 (64%), Gaps = 18/319 (5%) |
SwissP |
Show Blast
|
| Q9WUP7 |
Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Mus musculus GN=Uchl5 PE=2 SV=2
Evalue: 2e-68 | Bitscore: 259
Identities = 141/320 (44%), Positives = 205/320 (64%), Gaps = 19/320 (5%) |
SwissP |
Show Blast
|
| Q06AT3 |
Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Sus scrofa GN=UCHL5 PE=2 SV=1
Evalue: 5e-68 | Bitscore: 258
Identities = 140/320 (43%), Positives = 206/320 (64%), Gaps = 19/320 (5%) |
SwissP |
Show Blast
|
| Q54N38 |
Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Dictyostelium discoideum GN=uch2 PE=3 SV=1
Evalue: 6e-62 | Bitscore: 238
Identities = 131/336 (38%), Positives = 198/336 (58%), Gaps = 43/336 (12%) |
SwissP |
Show Blast
|
| Q09444 |
Probable ubiquitin carboxyl-terminal hydrolase ubh-4 OS=Caenorhabditis elegans GN=ubh-4 PE=1 SV=2
Evalue: 2e-57 | Bitscore: 223
Identities = 130/309 (42%), Positives = 191/309 (61%), Gaps = 16/309 (5%) |
SwissP |
Show Blast
|
| Q9UUB6 |
Ubiquitin carboxyl-terminal hydrolase 2 OS=Schizosaccharomyces pombe GN=uch2 PE=1 SV=1
Evalue: 2e-54 | Bitscore: 212
Identities = 127/310 (40%), Positives = 180/310 (58%), Gaps = 24/310 (7%) |
SwissP |
Show Blast
|
| Q92560 |
Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens GN=BAP1 PE=1 SV=2
Evalue: 7e-43 | Bitscore: 174
Identities = 117/310 (37%), Positives = 162/310 (52%), Gaps = 25/310 (8%) |
SwissP |
Show Blast
|
| Q99PU7 |
Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Mus musculus GN=Bap1 PE=1 SV=1
Evalue: 2e-42 | Bitscore: 172
Identities = 110/274 (40%), Positives = 153/274 (55%), Gaps = 25/274 (9%) |
SwissP |
Show Blast
|
| P35122 |
Ubiquitin carboxyl-terminal hydrolase OS=Drosophila melanogaster GN=Uch PE=2 SV=2
Evalue: 4e-15 | Bitscore: 82
Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 21/237 (8%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT1G65650.1 |
| Symbols: UCH2 | UCH2; ubiquitin thiolesterase | chr1:24418835-24421129 REVERSE
Evalue: 6e-73 | Bitscore: 270
Identities = 148/334 (44%), Positives = 207/334 (61%), Gaps = 25/334 (7%) |
Tair |
Show Blast
|
| AT5G16310.1 |
| Symbols: UCH1 | UCH1; ubiquitin thiolesterase | chr5:5342582-5344156 REVERSE
Evalue: 3e-63 | Bitscore: 238
Identities = 130/328 (39%), Positives = 198/328 (60%), Gaps = 34/328 (10%) |
Tair |
Show Blast
|
| AT4G17510.1 |
| Symbols: UCH3 | UCH3; ubiquitin thiolesterase | chr4:9767127-9768661 REVERSE
Evalue: 1e-13 | Bitscore: 73
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 22/232 (9%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
