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Ostreococcus tauri


Gene ID
Ot05g01030
Locus
Ot05g01030
Functional Description
protoporphyrin IX magnesium chelatase (ISS)
Gene Type
protein-coding gene
Contig
chrom05
Last Modified On
09 March 2010 1h45
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
protoporphyrin IX magnesium chelatase (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
catalytic activity

Biological Process
1.
biosynthetic process

Protein Domains 


Domain IDDescriptionDatabase
IPR003672 CobN/magnesium chelatase InterPro
PF11965 DUF3479 HMMPfam

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL53858.1 protoporphyrin IX magnesium chelatase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 2530
Identities = 1331/1331 (100%), Positives = 1331/1331 (100%), Gaps = 0/1331 (0%)
NCBI
Show Blast
XP_001417934.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1391
Identities = 693/845 (82%), Positives = 745/845 (88%), Gaps = 51/845 (6%)
NCBI
Show Blast
XP_002501976.1 magnesium-chelatase subunit chlh-like protein chloroplast precursor [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 1182
Identities = 633/1068 (59%), Positives = 765/1068 (71%), Gaps = 62/1068 (5%)
NCBI
Show Blast
ZP_06307427.1 Magnesium-chelatase, subunit H [Cylindrospermopsis raciborskii CS-505]
Evalue: 0.0 | Bitscore: 961
Identities = 535/1133 (47%), Positives = 687/1133 (60%), Gaps = 137/1133 (12%)
NCBI
Show Blast
YP_001519141.1 magnesium protoporphyrin IX chelatase, subunit H [Acaryochloris marina MBIC11017]
Evalue: 0.0 | Bitscore: 829
Identities = 459/925 (49%), Positives = 578/925 (62%), Gaps = 110/925 (11%)
NCBI
Show Blast
YP_001866167.1 magnesium chelatase, H subunit [Nostoc punctiforme PCC 73102]
Evalue: 0.0 | Bitscore: 825
Identities = 439/855 (51%), Positives = 559/855 (65%), Gaps = 94/855 (10%)
NCBI
Show Blast
ZP_01624180.1 Magnesium-chelatase, subunit H [Lyngbya sp. PCC 8106]
Evalue: 0.0 | Bitscore: 825
Identities = 431/841 (51%), Positives = 555/841 (65%), Gaps = 79/841 (9%)
NCBI
Show Blast
NP_488773.1 protoporphyrin IX magnesium chelatase [Nostoc sp. PCC 7120]
Evalue: 0.0 | Bitscore: 821
Identities = 441/852 (51%), Positives = 551/852 (64%), Gaps = 92/852 (10%)
NCBI
Show Blast
YP_322457.1 hydrogenobyrinic acid a,c-diamide cobaltochelatase [Anabaena variabilis ATCC 29413]
Evalue: 0.0 | Bitscore: 818
Identities = 440/846 (52%), Positives = 549/846 (64%), Gaps = 88/846 (10%)
NCBI
Show Blast
YP_001734259.1 magnesium-chelatase, subunit H [Synechococcus sp. PCC 7002]
Evalue: 0.0 | Bitscore: 818
Identities = 426/840 (50%), Positives = 546/840 (65%), Gaps = 77/840 (9%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

CDS  

Locus ID
Ot05g01030
Redo Blast
CDS Length
4062 nucleotides
CDS Sequence

Protein 

Locus ID
Ot05g01030
Redo Blast
Protein Length
242 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a