- Gene ID
- Ot04g04110
- Locus
- Ot04g04110
- Functional Description
- Branching Enzyme I (IC)
- Gene Type
- protein-coding gene
- Contig
- chrom04
- Last Modified On
- 09 March 2010 1h00
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Branching Enzyme I (IC)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
catalytic activity
2.
alpha-amylase activity
3.
cation binding
- Biological Process
-
1.
carbohydrate metabolic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
PTHR10357 |
AMYLASE |
HMMPanther |
|
IPR004193 |
Glycoside hydrolase, family 13, N-terminal |
InterPro |
|
IPR014756 |
Immunoglobulin E-set |
InterPro |
|
IPR006048 |
Alpha-amylase, C-terminal all beta |
InterPro |
|
IPR017853 |
Glycoside hydrolase, catalytic core |
InterPro |
|
SSF51011 |
Glycosyl hydrolase domain |
superfamily |
|
IPR013780 |
Glycosyl hydrolase, family 13, all-beta |
InterPro |
|
IPR013783 |
Immunoglobulin-like fold |
InterPro |
|
IPR013781 |
Glycoside hydrolase, subgroup, catalytic core |
InterPro |
|
IPR006047 |
Glycosyl hydrolase, family 13, catalytic domain |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AAS88882.1 |
SBEI [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1500
Identities = 776/776 (100%), Positives = 776/776 (100%), Gaps = 0/776 (0%) |
NCBI |
Show Blast
|
| CAL51809.1 |
Branching Enzyme I (IC) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1499
Identities = 776/776 (100%), Positives = 776/776 (100%), Gaps = 0/776 (0%) |
NCBI |
Show Blast
|
| XP_001417321.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1243
Identities = 600/709 (84%), Positives = 641/709 (90%), Gaps = 3/709 (0%) |
NCBI |
Show Blast
|
| XP_002505138.1 |
glycoside hydrolase family 13 protein [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 993
Identities = 465/689 (67%), Positives = 547/689 (79%), Gaps = 9/689 (1%) |
NCBI |
Show Blast
|
| EEH55246.1 |
glycoside hydrolase family 13 protein [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 962
Identities = 456/688 (66%), Positives = 547/688 (79%), Gaps = 9/688 (1%) |
NCBI |
Show Blast
|
| XP_001754772.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 866
Identities = 415/686 (60%), Positives = 519/686 (75%), Gaps = 17/686 (2%) |
NCBI |
Show Blast
|
| CAA54308.1 |
1,4-alpha-glucan branching enzyme [Manihot esculenta]
Evalue: 0.0 | Bitscore: 864
Identities = 413/685 (60%), Positives = 517/685 (75%), Gaps = 17/685 (2%) |
NCBI |
Show Blast
|
| ABN05321.1 |
starch branching enzyme I [Populus trichocarpa]
Evalue: 0.0 | Bitscore: 861
Identities = 413/685 (60%), Positives = 514/685 (75%), Gaps = 17/685 (2%) |
NCBI |
Show Blast
|
| BAA01854.1 |
branching enzyme-I precursor [Zea mays]
Evalue: 0.0 | Bitscore: 858
Identities = 420/724 (58%), Positives = 519/724 (71%), Gaps = 21/724 (2%) |
NCBI |
Show Blast
|
| NP_001105370.1 |
starch branching enzyme1 [Zea mays]
Evalue: 0.0 | Bitscore: 858
Identities = 420/724 (58%), Positives = 519/724 (71%), Gaps = 21/724 (2%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAH50177.1 |
unknown [environmental sequence]
Evalue: 1e-158 | Bitscore: 558
Identities = 264/291 (90%), Positives = 279/291 (95%) |
GOS |
Show Blast
|
| EAI26801.1 |
unknown [environmental sequence]
Evalue: 1e-139 | Bitscore: 494
Identities = 236/292 (80%), Positives = 257/292 (88%), Gaps = 2/292 (0%) |
GOS |
Show Blast
|
| EAD47318.1 |
unknown [environmental sequence]
Evalue: 2e-96 | Bitscore: 353
Identities = 181/309 (58%), Positives = 220/309 (71%), Gaps = 15/309 (4%) |
GOS |
Show Blast
|
| EAC93473.1 |
unknown [environmental sequence]
Evalue: 2e-75 | Bitscore: 283
Identities = 149/297 (50%), Positives = 185/297 (62%), Gaps = 20/297 (6%) |
GOS |
Show Blast
|
| EAD22290.1 |
unknown [environmental sequence]
Evalue: 6e-74 | Bitscore: 278
Identities = 151/271 (55%), Positives = 183/271 (67%), Gaps = 13/271 (4%) |
GOS |
Show Blast
|
| EAI40001.1 |
unknown [environmental sequence]
Evalue: 1e-43 | Bitscore: 177
Identities = 173/595 (29%), Positives = 271/595 (45%), Gaps = 66/595 (11%) |
GOS |
Show Blast
|
| EAJ91013.1 |
unknown [environmental sequence]
Evalue: 3e-40 | Bitscore: 166
Identities = 163/630 (25%), Positives = 277/630 (43%), Gaps = 106/630 (16%) |
GOS |
Show Blast
|
| EAI14709.1 |
unknown [environmental sequence]
Evalue: 1e-39 | Bitscore: 164
Identities = 162/630 (25%), Positives = 277/630 (43%), Gaps = 106/630 (16%) |
GOS |
Show Blast
|
| EAJ51111.1 |
unknown [environmental sequence]
Evalue: 2e-39 | Bitscore: 163
Identities = 163/630 (25%), Positives = 277/630 (43%), Gaps = 106/630 (16%) |
GOS |
Show Blast
|
| EAJ51399.1 |
unknown [environmental sequence]
Evalue: 3e-39 | Bitscore: 163
Identities = 162/630 (25%), Positives = 274/630 (43%), Gaps = 106/630 (16%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AAS88882.1 |
SBEI [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1500
Identities = 776/776 (100%), Positives = 776/776 (100%), Gaps = 0/776 (0%) |
NCBI |
Show Blast
|
| CAL51809.1 |
Branching Enzyme I (IC) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1499
Identities = 776/776 (100%), Positives = 776/776 (100%), Gaps = 0/776 (0%) |
NCBI |
Show Blast
|
| XP_001417321.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1243
Identities = 600/709 (84%), Positives = 641/709 (90%), Gaps = 3/709 (0%) |
NCBI |
Show Blast
|
| XP_002505138.1 |
glycoside hydrolase family 13 protein [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 993
Identities = 465/689 (67%), Positives = 547/689 (79%), Gaps = 9/689 (1%) |
NCBI |
Show Blast
|
| EEH55246.1 |
glycoside hydrolase family 13 protein [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 962
Identities = 456/688 (66%), Positives = 547/688 (79%), Gaps = 9/688 (1%) |
NCBI |
Show Blast
|
| XP_001754772.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 866
Identities = 415/686 (60%), Positives = 519/686 (75%), Gaps = 17/686 (2%) |
NCBI |
Show Blast
|
| CAA54308.1 |
1,4-alpha-glucan branching enzyme [Manihot esculenta]
Evalue: 0.0 | Bitscore: 864
Identities = 413/685 (60%), Positives = 517/685 (75%), Gaps = 17/685 (2%) |
NCBI |
Show Blast
|
| ABN05321.1 |
starch branching enzyme I [Populus trichocarpa]
Evalue: 0.0 | Bitscore: 861
Identities = 413/685 (60%), Positives = 514/685 (75%), Gaps = 17/685 (2%) |
NCBI |
Show Blast
|
| BAA01854.1 |
branching enzyme-I precursor [Zea mays]
Evalue: 0.0 | Bitscore: 858
Identities = 420/724 (58%), Positives = 519/724 (71%), Gaps = 21/724 (2%) |
NCBI |
Show Blast
|
| NP_001105370.1 |
starch branching enzyme1 [Zea mays]
Evalue: 0.0 | Bitscore: 858
Identities = 420/724 (58%), Positives = 519/724 (71%), Gaps = 21/724 (2%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot03g00840 |
chrom03.0001 [144269..146752,146985..147041]
Evalue: 0.0 | Bitscore: 730
Identities = 378/702 (53%), Positives = 472/702 (67%), Gaps = 37/702 (5%) |
Self |
Show Blast
|
| Ot14g02550 |
chrom14.0001 [366197..368752]
Evalue: 3e-08 | Bitscore: 55
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 37/203 (18%) |
Self |
Show Blast
|
| Ot12g00310 |
chrom12.0001 [46038..46451,46504..47805]
Evalue: 1e-07 | Bitscore: 53
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 25/169 (14%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| P30924 |
1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum GN=SBE1 PE=2 SV=2
Evalue: 0.0 | Bitscore: 846
Identities = 401/648 (61%), Positives = 496/648 (76%), Gaps = 8/648 (1%) |
SwissP |
Show Blast
|
| Q01401 |
1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2
Evalue: 0.0 | Bitscore: 844
Identities = 405/694 (58%), Positives = 508/694 (73%), Gaps = 17/694 (2%) |
SwissP |
Show Blast
|
| Q08047 |
1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 SV=1
Evalue: 0.0 | Bitscore: 741
Identities = 373/698 (53%), Positives = 484/698 (69%), Gaps = 38/698 (5%) |
SwissP |
Show Blast
|
| Q6T308 |
1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1
Evalue: 0.0 | Bitscore: 702
Identities = 349/672 (51%), Positives = 448/672 (66%), Gaps = 22/672 (3%) |
SwissP |
Show Blast
|
| Q6EAS5 |
1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2 SV=1
Evalue: 0.0 | Bitscore: 698
Identities = 343/686 (50%), Positives = 458/686 (66%), Gaps = 22/686 (3%) |
SwissP |
Show Blast
|
| Q04446 |
1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=2
Evalue: 0.0 | Bitscore: 691
Identities = 344/676 (50%), Positives = 451/676 (66%), Gaps = 22/676 (3%) |
SwissP |
Show Blast
|
| Q8NKE1 |
1,4-alpha-glucan-branching enzyme OS=Glomus intraradices GN=GLC3 PE=2 SV=1
Evalue: 0.0 | Bitscore: 691
Identities = 332/667 (49%), Positives = 452/667 (67%), Gaps = 13/667 (1%) |
SwissP |
Show Blast
|
| Q9D6Y9 |
1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1
Evalue: 0.0 | Bitscore: 687
Identities = 342/676 (50%), Positives = 450/676 (66%), Gaps = 22/676 (3%) |
SwissP |
Show Blast
|
| Q555Q9 |
1,4-alpha-glucan-branching enzyme OS=Dictyostelium discoideum GN=glgB PE=3 SV=1
Evalue: 0.0 | Bitscore: 684
Identities = 348/688 (50%), Positives = 450/688 (65%), Gaps = 23/688 (3%) |
SwissP |
Show Blast
|
| Q9Y8H3 |
1,4-alpha-glucan-branching enzyme OS=Emericella nidulans GN=be1 PE=2 SV=2
Evalue: 0.0 | Bitscore: 683
Identities = 347/685 (50%), Positives = 449/685 (65%), Gaps = 17/685 (2%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT2G36390.1 |
| Symbols: BE3, SBE2.1 | SBE2.1 (STARCH BRANCHING ENZYME 2.1); 1,4-alpha-glucan branching enzyme |
Evalue: 0.0 | Bitscore: 753
Identities = 374/692 (54%), Positives = 476/692 (68%), Gaps = 34/692 (4%) |
Tair |
Show Blast
|
| AT5G03650.1 |
| Symbols: SBE2.2 | SBE2.2 (STARCH BRANCHING ENZYME 2.2); 1,4-alpha-glucan branching enzyme | chr5:931923-937469
Evalue: 0.0 | Bitscore: 745
Identities = 368/697 (52%), Positives = 482/697 (69%), Gaps = 36/697 (5%) |
Tair |
Show Blast
|
| AT3G20440.1 |
| Symbols: EMB2729, BE1 | BE1/EMB2729 (BRANCHING ENZYME 1); alpha-amylase | chr3:7123609-7130370 REVERSE
Evalue: 1e-109 | Bitscore: 392
Identities = 216/577 (37%), Positives = 333/577 (57%), Gaps = 53/577 (9%) |
Tair |
Show Blast
|
| AT1G03310.2 |
| Symbols: ATISA2, ISA2, DBE1, BE2 | ATISA2/BE2/DBE1/ISA2 (DEBRANCHING ENZYME 1); alpha-amylase |
Evalue: 2e-09 | Bitscore: 61
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 17/132 (12%) |
Tair |
Show Blast
|
| AT1G03310.1 |
| Symbols: ATISA2, ISA2, DBE1, BE2 | ATISA2/BE2/DBE1/ISA2 (DEBRANCHING ENZYME 1); alpha-amylase/ isoamylase |
Evalue: 2e-09 | Bitscore: 61
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 17/132 (12%) |
Tair |
Show Blast
|
| AT4G09020.1 |
| Symbols: ATISA3, ISA3 | ATISA3/ISA3 (ISOAMYLASE 3); alpha-amylase | chr4:5784096-5788836 FORWARD
Evalue: 2e-08 | Bitscore: 58
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 48/216 (22%) |
Tair |
Show Blast
|
| AT2G39930.1 |
| Symbols: ATISA1, ISA1 | ATISA1/ISA1 (ISOAMYLASE 1); alpha-amylase/ isoamylase | chr2:16673156-16679261
Evalue: 3e-06 | Bitscore: 51
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 12/137 (8%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
