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Ostreococcus tauri


Gene ID
Ot04g03660
Locus
Ot04g03660
Functional Description
CREB binding protein/P300 and related TAZ Zn-finger proteins (ISS)
Gene Type
protein-coding gene
Contig
chrom04
Last Modified On
09 March 2010 0h54
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
CREB binding protein/P300 and related TAZ Zn-finger proteins (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
1.
nucleus

Molecular Function
1.
transcription coactivator activity

Biological Process
n/a
 
Comment
Unknown GO IDs: GO:0045449

Protein Domains 


Domain IDDescriptionDatabase
PTHR13808 CBP/P300-RELATED HMMPanther
IPR019786 Zinc finger, PHD-type, conserved site InterPro
IPR001965 Zinc finger, PHD-type InterPro
IPR000197 Zinc finger, TAZ-type InterPro
PF08214 KAT11 HMMPfam
IPR011011 Zinc finger, FYVE/PHD-type InterPro
G3DSA:3.30.40.10 no description Gene3D
IPR019787 Zinc finger, PHD-finger InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL51764.1 CREB binding protein/P300 and related TAZ Zn-finger proteins (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1524
Identities = 760/760 (100%), Positives = 760/760 (100%), Gaps = 0/760 (0%)
NCBI
Show Blast
XP_001417549.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1272
Identities = 617/709 (87%), Positives = 661/709 (93%), Gaps = 3/709 (0%)
NCBI
Show Blast
XP_002504883.1 histone acetyltransferase [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 938
Identities = 464/717 (64%), Positives = 536/717 (74%), Gaps = 31/717 (4%)
NCBI
Show Blast
EEH55488.1 histone acetyltransferase [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 914
Identities = 450/735 (61%), Positives = 539/735 (73%), Gaps = 35/735 (4%)
NCBI
Show Blast
CBI18356.1 unnamed protein product [Vitis vinifera]
Evalue: 1e-140 | Bitscore: 505
Identities = 289/688 (42%), Positives = 391/688 (56%), Gaps = 78/688 (11%)
NCBI
Show Blast
XP_001785357.1 p300/CBP acetyltransferase-related protein [Physcomitrella patens subsp. patens]
Evalue: 2e-140 | Bitscore: 504
Identities = 270/609 (44%), Positives = 370/609 (60%), Gaps = 24/609 (3%)
NCBI
Show Blast
XP_002270538.1 PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 5e-138 | Bitscore: 496
Identities = 268/592 (45%), Positives = 366/592 (61%), Gaps = 23/592 (3%)
NCBI
Show Blast
XP_001775575.1 p300/CBP acetyltransferase-related protein [Physcomitrella patens subsp. patens]
Evalue: 2e-137 | Bitscore: 494
Identities = 257/566 (45%), Positives = 349/566 (61%), Gaps = 18/566 (3%)
NCBI
Show Blast
NP_173115.1 HAC12 (histone acetyltransferase of the CBP family 12); H3/H4 histone acetyltransferase/ histone acetyltransferase/ transcription
Evalue: 1e-133 | Bitscore: 481
Identities = 261/583 (44%), Positives = 357/583 (61%), Gaps = 28/583 (4%)
NCBI
Show Blast
AAG09087.1 Unknown Protein [Arabidopsis thaliana]
Evalue: 2e-133 | Bitscore: 481
Identities = 261/583 (44%), Positives = 357/583 (61%), Gaps = 28/583 (4%)
NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

CDS  

Locus ID
Ot04g03660
Redo Blast
CDS Length
2283 nucleotides
CDS Sequence

Protein 

Locus ID
Ot04g03660
Redo Blast
Protein Length
761 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a