- Gene ID
- Ot04g03460
- Locus
- Ot04g03460
- Functional Description
- unnamed product
- Gene Type
- protein-coding gene
- Contig
- chrom04
- Last Modified On
- 09 March 2010 0h50
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- unnamed product
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
catalytic activity
2.
1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
3.
metal ion binding
- Biological Process
-
1.
isoprenoid biosynthetic process
2.
obsolete oxidation-reduction process
Protein Domains
| Domain ID | Description | Database |
|---|
|
SSF53474 |
alpha/beta-Hydrolases |
superfamily |
|
IPR013644 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal |
InterPro |
|
SSF69055 |
1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
superfamily |
|
SSF55347 |
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
superfamily |
|
G3DSA:3.40.50.1820 |
no description |
Gene3D |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL51744.1 |
1-deoxy-D-xylulose-5-phosphate reductoisomerase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1123
Identities = 585/585 (100%), Positives = 585/585 (100%), Gaps = 0/585 (0%) |
NCBI |
Show Blast
|
| XP_001417285.1 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate
Evalue: 2e-138 | Bitscore: 497
Identities = 234/253 (92%), Positives = 243/253 (96%), Gaps = 0/253 (0%) |
NCBI |
Show Blast
|
| ACI45953.1 |
putative plastid 1-deoxy-D-xylulose 5-phosphate reductoisomerase precursor [Mantoniella squamata]
Evalue: 9e-124 | Bitscore: 448
Identities = 211/249 (84%), Positives = 226/249 (90%), Gaps = 0/249 (0%) |
NCBI |
Show Blast
|
| XP_002504113.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 3e-123 | Bitscore: 446
Identities = 209/246 (84%), Positives = 225/246 (91%), Gaps = 0/246 (0%) |
NCBI |
Show Blast
|
| EEH56768.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-122 | Bitscore: 443
Identities = 208/246 (84%), Positives = 225/246 (91%), Gaps = 0/246 (0%) |
NCBI |
Show Blast
|
| BAE79548.1 |
1-deoxyxylulose 5-phosphate reductoisomerase [Chrysanthemum x morifolium]
Evalue: 4e-100 | Bitscore: 370
Identities = 167/238 (70%), Positives = 200/238 (84%), Gaps = 7/238 (2%) |
NCBI |
Show Blast
|
| AAD56391.2 |
1-deoxy-D-xylulose-5-phosphate reductoisomerase [Artemisia annua]
Evalue: 5e-100 | Bitscore: 369
Identities = 166/238 (69%), Positives = 199/238 (83%), Gaps = 7/238 (2%) |
NCBI |
Show Blast
|
| XP_002318048.1 |
predicted protein [Populus trichocarpa]
Evalue: 9e-99 | Bitscore: 365
Identities = 165/245 (67%), Positives = 200/245 (81%), Gaps = 7/245 (2%) |
NCBI |
Show Blast
|
| AAT47184.1 |
1-deoxy-D-xylulose-5-phosphate reductoisomerase [Taxus cuspidata]
Evalue: 1e-98 | Bitscore: 365
Identities = 163/245 (66%), Positives = 200/245 (81%), Gaps = 7/245 (2%) |
NCBI |
Show Blast
|
| ACD70397.1 |
putative chloroplast 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Populus trichocarpa]
Evalue: 1e-98 | Bitscore: 364
Identities = 165/245 (67%), Positives = 200/245 (81%), Gaps = 7/245 (2%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAJ20114.1 |
unknown [environmental sequence]
Evalue: 9e-83 | Bitscore: 307
Identities = 141/165 (85%), Positives = 155/165 (93%) |
GOS |
Show Blast
|
| EAH82834.1 |
unknown [environmental sequence]
Evalue: 1e-76 | Bitscore: 287
Identities = 146/258 (56%), Positives = 180/258 (69%), Gaps = 22/258 (8%) |
GOS |
Show Blast
|
| EAI73433.1 |
unknown [environmental sequence]
Evalue: 1e-75 | Bitscore: 283
Identities = 140/259 (54%), Positives = 177/259 (68%), Gaps = 22/259 (8%) |
GOS |
Show Blast
|
| EAB10862.1 |
unknown [environmental sequence]
Evalue: 4e-74 | Bitscore: 278
Identities = 138/253 (54%), Positives = 174/253 (68%), Gaps = 22/253 (8%) |
GOS |
Show Blast
|
| EAI45545.1 |
unknown [environmental sequence]
Evalue: 1e-73 | Bitscore: 277
Identities = 137/259 (52%), Positives = 177/259 (68%), Gaps = 22/259 (8%) |
GOS |
Show Blast
|
| EAF77833.1 |
unknown [environmental sequence]
Evalue: 1e-71 | Bitscore: 270
Identities = 135/254 (53%), Positives = 172/254 (67%), Gaps = 22/254 (8%) |
GOS |
Show Blast
|
| EAB91491.1 |
unknown [environmental sequence]
Evalue: 3e-71 | Bitscore: 269
Identities = 133/237 (56%), Positives = 169/237 (71%), Gaps = 11/237 (4%) |
GOS |
Show Blast
|
| EAK79464.1 |
unknown [environmental sequence]
Evalue: 1e-70 | Bitscore: 267
Identities = 132/237 (55%), Positives = 169/237 (71%), Gaps = 11/237 (4%) |
GOS |
Show Blast
|
| EAC01858.1 |
unknown [environmental sequence]
Evalue: 3e-70 | Bitscore: 265
Identities = 131/236 (55%), Positives = 167/236 (70%), Gaps = 11/236 (4%) |
GOS |
Show Blast
|
| EAH46031.1 |
unknown [environmental sequence]
Evalue: 7e-65 | Bitscore: 248
Identities = 120/211 (56%), Positives = 149/211 (70%), Gaps = 22/211 (10%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL51744.1 |
1-deoxy-D-xylulose-5-phosphate reductoisomerase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1123
Identities = 585/585 (100%), Positives = 585/585 (100%), Gaps = 0/585 (0%) |
NCBI |
Show Blast
|
| XP_001417285.1 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate
Evalue: 2e-138 | Bitscore: 497
Identities = 234/253 (92%), Positives = 243/253 (96%), Gaps = 0/253 (0%) |
NCBI |
Show Blast
|
| ACI45953.1 |
putative plastid 1-deoxy-D-xylulose 5-phosphate reductoisomerase precursor [Mantoniella squamata]
Evalue: 9e-124 | Bitscore: 448
Identities = 211/249 (84%), Positives = 226/249 (90%), Gaps = 0/249 (0%) |
NCBI |
Show Blast
|
| XP_002504113.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 3e-123 | Bitscore: 446
Identities = 209/246 (84%), Positives = 225/246 (91%), Gaps = 0/246 (0%) |
NCBI |
Show Blast
|
| EEH56768.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-122 | Bitscore: 443
Identities = 208/246 (84%), Positives = 225/246 (91%), Gaps = 0/246 (0%) |
NCBI |
Show Blast
|
| BAE79548.1 |
1-deoxyxylulose 5-phosphate reductoisomerase [Chrysanthemum x morifolium]
Evalue: 4e-100 | Bitscore: 370
Identities = 167/238 (70%), Positives = 200/238 (84%), Gaps = 7/238 (2%) |
NCBI |
Show Blast
|
| AAD56391.2 |
1-deoxy-D-xylulose-5-phosphate reductoisomerase [Artemisia annua]
Evalue: 5e-100 | Bitscore: 369
Identities = 166/238 (69%), Positives = 199/238 (83%), Gaps = 7/238 (2%) |
NCBI |
Show Blast
|
| XP_002318048.1 |
predicted protein [Populus trichocarpa]
Evalue: 9e-99 | Bitscore: 365
Identities = 165/245 (67%), Positives = 200/245 (81%), Gaps = 7/245 (2%) |
NCBI |
Show Blast
|
| AAT47184.1 |
1-deoxy-D-xylulose-5-phosphate reductoisomerase [Taxus cuspidata]
Evalue: 1e-98 | Bitscore: 365
Identities = 163/245 (66%), Positives = 200/245 (81%), Gaps = 7/245 (2%) |
NCBI |
Show Blast
|
| ACD70397.1 |
putative chloroplast 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Populus trichocarpa]
Evalue: 1e-98 | Bitscore: 364
Identities = 165/245 (67%), Positives = 200/245 (81%), Gaps = 7/245 (2%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q8W250 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2
Evalue: 9e-98 | Bitscore: 358
Identities = 163/249 (65%), Positives = 202/249 (81%), Gaps = 7/249 (2%) |
SwissP |
Show Blast
|
| Q9XFS9 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=DXR PE=2 SV=2
Evalue: 2e-97 | Bitscore: 356
Identities = 165/253 (65%), Positives = 202/253 (79%), Gaps = 10/253 (3%) |
SwissP |
Show Blast
|
| Q9XES0 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Mentha piperita GN=DXR PE=2 SV=2
Evalue: 5e-96 | Bitscore: 352
Identities = 161/252 (63%), Positives = 204/252 (80%), Gaps = 8/252 (3%) |
SwissP |
Show Blast
|
| Q8YP49 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anabaena sp. (strain PCC 7120) GN=dxr PE=3 SV=1
Evalue: 5e-80 | Bitscore: 299
Identities = 137/239 (57%), Positives = 180/239 (75%), Gaps = 10/239 (4%) |
SwissP |
Show Blast
|
| B0CD21 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acaryochloris marina (strain MBIC 11017) GN=dxr PE=3 SV=1
Evalue: 1e-79 | Bitscore: 297
Identities = 140/245 (57%), Positives = 181/245 (73%), Gaps = 10/245 (4%) |
SwissP |
Show Blast
|
| B2ITX3 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxr PE=3
Evalue: 2e-79 | Bitscore: 296
Identities = 138/244 (56%), Positives = 181/244 (74%), Gaps = 10/244 (4%) |
SwissP |
Show Blast
|
| Q3MDL2 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxr PE=3
Evalue: 5e-79 | Bitscore: 295
Identities = 136/239 (56%), Positives = 179/239 (74%), Gaps = 10/239 (4%) |
SwissP |
Show Blast
|
| Q0IBN9 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9311) GN=dxr PE=3 SV=1
Evalue: 1e-78 | Bitscore: 294
Identities = 152/264 (57%), Positives = 187/264 (70%), Gaps = 23/264 (8%) |
SwissP |
Show Blast
|
| Q7VB62 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus GN=dxr PE=3 SV=1
Evalue: 2e-78 | Bitscore: 293
Identities = 144/256 (56%), Positives = 179/256 (69%), Gaps = 22/256 (8%) |
SwissP |
Show Blast
|
| B7K5G6 |
1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 8801) GN=dxr PE=3 SV=1
Evalue: 7e-78 | Bitscore: 291
Identities = 137/239 (57%), Positives = 172/239 (71%), Gaps = 10/239 (4%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT5G62790.1 |
| Symbols: PDE129, DXR | DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE) | chr5:25231584-25234518 REVERSE
Evalue: 2e-98 | Bitscore: 356
Identities = 165/253 (65%), Positives = 202/253 (79%), Gaps = 10/253 (3%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
