- Gene ID
- Ot04g02230
- Locus
- Ot04g02230
- Functional Description
- Magnesium chelatase H subunit (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom04
- Last Modified On
- 09 March 2010 0h32
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Magnesium chelatase H subunit (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
magnesium chelatase activity
- Biological Process
-
1.
chlorophyll biosynthetic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR003672 |
CobN/magnesium chelatase |
InterPro |
|
IPR011771 |
Magnesium-chelatase, subunit H |
InterPro |
|
PF11965 |
DUF3479 |
HMMPfam |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL51621.1 |
Magnesium chelatase H subunit (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 2680
Identities = 1397/1397 (100%), Positives = 1397/1397 (100%), Gaps = 0/1397 (0%) |
NCBI |
Show Blast
|
| XP_001417229.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 2500
Identities = 1280/1337 (95%), Positives = 1317/1337 (98%), Gaps = 1/1337 (0%) |
NCBI |
Show Blast
|
| EEH57631.1 |
magnesium-chelatase subunit chlH chloroplast precursor [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 2287
Identities = 1147/1355 (84%), Positives = 1253/1355 (92%), Gaps = 3/1355 (0%) |
NCBI |
Show Blast
|
| XP_002501851.1 |
magnesium-chelatase subunit chlH chloroplast precursor [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 2285
Identities = 1146/1329 (86%), Positives = 1234/1329 (92%), Gaps = 2/1329 (0%) |
NCBI |
Show Blast
|
| XP_001783002.1 |
CHLH1 like Mg protoporphyrin IX chelatase subunit H protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 1935
Identities = 981/1338 (73%), Positives = 1137/1338 (84%), Gaps = 14/1338 (1%) |
NCBI |
Show Blast
|
| XP_001782994.1 |
CHLH2 like Mg protoporphyrin IX chelatase subunit H protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 1935
Identities = 981/1338 (73%), Positives = 1137/1338 (84%), Gaps = 14/1338 (1%) |
NCBI |
Show Blast
|
| XP_001700895.1 |
magnesium chelatase subunit H [Chlamydomonas reinhardtii]
Evalue: 0.0 | Bitscore: 1920
Identities = 998/1360 (73%), Positives = 1149/1360 (84%), Gaps = 19/1360 (1%) |
NCBI |
Show Blast
|
| CAC69552.1 |
Magnesium chelatase H subunit [Chlamydomonas reinhardtii]
Evalue: 0.0 | Bitscore: 1918
Identities = 997/1360 (73%), Positives = 1148/1360 (84%), Gaps = 19/1360 (1%) |
NCBI |
Show Blast
|
| XP_002284078.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 0.0 | Bitscore: 1846
Identities = 934/1335 (69%), Positives = 1107/1335 (82%), Gaps = 16/1335 (1%) |
NCBI |
Show Blast
|
| CAA04526.1 |
magnesium chelatase subunit [Glycine max]
Evalue: 0.0 | Bitscore: 1845
Identities = 932/1336 (69%), Positives = 1106/1336 (82%), Gaps = 17/1336 (1%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAJ22909.1 |
unknown [environmental sequence]
Evalue: 0.0 | Bitscore: 1615
Identities = 809/1288 (62%), Positives = 987/1288 (76%), Gaps = 21/1288 (1%) |
GOS |
Show Blast
|
| EAJ19322.1 |
unknown [environmental sequence]
Evalue: 0.0 | Bitscore: 928
Identities = 458/771 (59%), Positives = 560/771 (72%), Gaps = 14/771 (1%) |
GOS |
Show Blast
|
| EAI97526.1 |
unknown [environmental sequence]
Evalue: 0.0 | Bitscore: 700
Identities = 356/524 (67%), Positives = 423/524 (80%), Gaps = 8/524 (1%) |
GOS |
Show Blast
|
| EAJ73721.1 |
unknown [environmental sequence]
Evalue: 0.0 | Bitscore: 652
Identities = 314/503 (62%), Positives = 383/503 (76%), Gaps = 5/503 (0%) |
GOS |
Show Blast
|
| EAI55776.1 |
unknown [environmental sequence]
Evalue: 1e-179 | Bitscore: 630
Identities = 306/491 (62%), Positives = 372/491 (75%), Gaps = 4/491 (0%) |
GOS |
Show Blast
|
| EAJ92282.1 |
unknown [environmental sequence]
Evalue: 1e-177 | Bitscore: 623
Identities = 310/539 (57%), Positives = 395/539 (73%), Gaps = 10/539 (1%) |
GOS |
Show Blast
|
| EAK31458.1 |
unknown [environmental sequence]
Evalue: 1e-177 | Bitscore: 622
Identities = 309/538 (57%), Positives = 395/538 (73%), Gaps = 10/538 (1%) |
GOS |
Show Blast
|
| EAJ86757.1 |
unknown [environmental sequence]
Evalue: 1e-170 | Bitscore: 599
Identities = 293/469 (62%), Positives = 345/469 (73%), Gaps = 5/469 (1%) |
GOS |
Show Blast
|
| EAJ12493.1 |
unknown [environmental sequence]
Evalue: 1e-140 | Bitscore: 499
Identities = 263/418 (62%), Positives = 321/418 (76%), Gaps = 9/418 (2%) |
GOS |
Show Blast
|
| EAI17043.1 |
unknown [environmental sequence]
Evalue: 1e-130 | Bitscore: 465
Identities = 226/379 (59%), Positives = 271/379 (71%), Gaps = 4/379 (1%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL51621.1 |
Magnesium chelatase H subunit (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 2680
Identities = 1397/1397 (100%), Positives = 1397/1397 (100%), Gaps = 0/1397 (0%) |
NCBI |
Show Blast
|
| XP_001417229.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 2500
Identities = 1280/1337 (95%), Positives = 1317/1337 (98%), Gaps = 1/1337 (0%) |
NCBI |
Show Blast
|
| EEH57631.1 |
magnesium-chelatase subunit chlH chloroplast precursor [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 2287
Identities = 1147/1355 (84%), Positives = 1253/1355 (92%), Gaps = 3/1355 (0%) |
NCBI |
Show Blast
|
| XP_002501851.1 |
magnesium-chelatase subunit chlH chloroplast precursor [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 2285
Identities = 1146/1329 (86%), Positives = 1234/1329 (92%), Gaps = 2/1329 (0%) |
NCBI |
Show Blast
|
| XP_001783002.1 |
CHLH1 like Mg protoporphyrin IX chelatase subunit H protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 1935
Identities = 981/1338 (73%), Positives = 1137/1338 (84%), Gaps = 14/1338 (1%) |
NCBI |
Show Blast
|
| XP_001782994.1 |
CHLH2 like Mg protoporphyrin IX chelatase subunit H protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 1935
Identities = 981/1338 (73%), Positives = 1137/1338 (84%), Gaps = 14/1338 (1%) |
NCBI |
Show Blast
|
| XP_001700895.1 |
magnesium chelatase subunit H [Chlamydomonas reinhardtii]
Evalue: 0.0 | Bitscore: 1920
Identities = 998/1360 (73%), Positives = 1149/1360 (84%), Gaps = 19/1360 (1%) |
NCBI |
Show Blast
|
| CAC69552.1 |
Magnesium chelatase H subunit [Chlamydomonas reinhardtii]
Evalue: 0.0 | Bitscore: 1918
Identities = 997/1360 (73%), Positives = 1148/1360 (84%), Gaps = 19/1360 (1%) |
NCBI |
Show Blast
|
| XP_002284078.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 0.0 | Bitscore: 1846
Identities = 934/1335 (69%), Positives = 1107/1335 (82%), Gaps = 16/1335 (1%) |
NCBI |
Show Blast
|
| CAA04526.1 |
magnesium chelatase subunit [Glycine max]
Evalue: 0.0 | Bitscore: 1845
Identities = 932/1336 (69%), Positives = 1106/1336 (82%), Gaps = 17/1336 (1%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot05g01030 |
chrom05.0001 [139282..139534,139588..140061,140093..140139, 140175..140753,140786..143494]
Evalue: 7e-65 | Bitscore: 244
Identities = 225/839 (26%), Positives = 355/839 (42%), Gaps = 136/839 (16%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| O50314 |
Magnesium-chelatase subunit H OS=Chlorobaculum parvum (strain NCIB 8327) GN=bchH PE=3 SV=2
Evalue: 0.0 | Bitscore: 651
Identities = 419/1329 (31%), Positives = 686/1329 (51%), Gaps = 104/1329 (7%) |
SwissP |
Show Blast
|
| P26162 |
Magnesium-chelatase subunit H OS=Rhodobacter capsulatus GN=bchH PE=3 SV=1
Evalue: 1e-125 | Bitscore: 451
Identities = 264/727 (36%), Positives = 385/727 (52%), Gaps = 60/727 (8%) |
SwissP |
Show Blast
|
| Q9RFD5 |
Magnesium-chelatase subunit H OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=bchH PE=3
Evalue: 1e-124 | Bitscore: 447
Identities = 272/765 (35%), Positives = 406/765 (53%), Gaps = 65/765 (8%) |
SwissP |
Show Blast
|
| P29929 |
Aerobic cobaltochelatase subunit cobN OS=Pseudomonas denitrificans GN=cobN PE=1 SV=1
Evalue: 1e-101 | Bitscore: 369
Identities = 322/1183 (27%), Positives = 526/1183 (44%), Gaps = 91/1183 (7%) |
SwissP |
Show Blast
|
| Q9HZQ3 |
Aerobic cobaltochelatase subunit cobN OS=Pseudomonas aeruginosa GN=cobN PE=3 SV=1
Evalue: 1e-98 | Bitscore: 362
Identities = 323/1181 (27%), Positives = 517/1181 (43%), Gaps = 117/1181 (9%) |
SwissP |
Show Blast
|
| Q58836 |
Uncharacterized protein MJ1441 OS=Methanocaldococcus jannaschii GN=MJ1441 PE=3 SV=1
Evalue: 1e-80 | Bitscore: 302
Identities = 176/463 (38%), Positives = 263/463 (56%), Gaps = 19/463 (4%) |
SwissP |
Show Blast
|
| Q58318 |
Uncharacterized protein MJ0908 OS=Methanocaldococcus jannaschii GN=MJ0908 PE=3 SV=1
Evalue: 5e-75 | Bitscore: 283
Identities = 167/469 (35%), Positives = 266/469 (56%), Gaps = 20/469 (4%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT5G13630.1 |
| Symbols: CCH, CHLH, CCH1, GUN5 | GUN5 (GENOMES UNCOUPLED 5) | chr5:4387570-4392085 REVERSE
Evalue: 0.0 | Bitscore: 1799
Identities = 889/1344 (66%), Positives = 1068/1344 (79%), Gaps = 14/1344 (1%) |
Tair |
Show Blast
|
| AT5G13630.2 |
| Symbols: CCH, CHLH, CCH1, GUN5 | GUN5 (GENOMES UNCOUPLED 5) | chr5:4387923-4392085 REVERSE
Evalue: 0.0 | Bitscore: 1595
Identities = 795/1222 (65%), Positives = 956/1222 (78%), Gaps = 14/1222 (1%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | CTZ03-A03.y1d-s |
Support Model | Y |
More Info |
| Mapping Location | 335659..336566 |
Strand + |
| EST ID | CTZ16-C09.y1d-s |
Support Model | Y |
More Info |
| Mapping Location | 335254..336109 |
Strand + |
| EST ID | CTZ18-B02.y1d-s |
Support Model | Y |
More Info |
| Mapping Location | 335393..336245 |
Strand + |
| EST ID | CTZ33-E07.y1d-s |
Support Model | Y |
More Info |
| Mapping Location | 335320..336232 |
Strand + |
| EST ID | CTZ67-D11.y1d-s |
Support Model | Y |
More Info |
| Mapping Location | 335885..336696 |
Strand + |
|
